SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1049201 9qcc:V (3.0) BS03 CA N/A N/A A7ICE9 41298897
    1049202 9qcc:W (3.0) BS01 dna N/A N/A A7ICE8 41298897
    1049203 9qcc:W (3.0) BS02 rna N/A N/A A7ICE8 41298897
    1049204 9qcc:X (3.0) BS01 dna N/A N/A A7ICE9 41298897
    1049205 9qcc:X (3.0) BS02 rna N/A N/A A7ICE9 41298897
    1049206 9qcc:X (3.0) BS03 CA N/A N/A A7ICE9 41298897
    1049207 9qcc:Y (3.0) BS01 dna N/A N/A A7ICE8 41298897
    1049208 9qcc:Y (3.0) BS02 rna N/A N/A A7ICE8 41298897
    1049209 9qcc:Z (3.0) BS01 dna N/A N/A A7ICE9 41298897
    1049210 9qcc:Z (3.0) BS02 rna N/A N/A A7ICE9 41298897
    1049211 9qcf:G (2.9) BS01 MG N/A GO:0003674 ... P21243 41033310
    1049212 9qcf:I (2.9) BS01 MG N/A GO:0005515 ... P25451 41033310
    1049213 9qcf:K (2.9) BS01 MG N/A GO:0004298 ... P30656 41033310
    1049214 9qcf:V (2.9) BS01 MG N/A GO:0004298 ... P25043 41033310
    1049215 9qcf:Y (2.9) BS01 MG N/A GO:0004298 ... P30656 41033310
    1049216 9qcf:Z (2.9) BS01 MG N/A GO:0003674 ... P23724 41033310
    1049217 9qcg:A (2.39) BS01 NDP N/A GO:0003824 ... Q8TWG5 39834309
    1049218 9qcg:B (2.39) BS01 NDP N/A GO:0003824 ... Q8TWG5 39834309
    1049219 9qch:A (2.198) BS01 CSC N/A GO:0005576 ... P14639 41596427
    1049220 9qcj:A (2.24) BS01 PO4 N/A N/A P28581 41402308
    1049221 9qcj:B (2.24) BS01 PO4 N/A N/A P28581 41402308
    1049222 9qcj:C (2.24) BS01 PO4 N/A N/A P28581 41402308
    1049223 9qck:G (2.7) BS01 MG N/A GO:0003674 ... P21243 41033310
    1049224 9qck:I (2.7) BS01 MG N/A GO:0005515 ... P25451 41033310
    1049225 9qck:K (2.7) BS01 MG N/A GO:0004298 ... P30656 41033310
    1049226 9qck:V (2.7) BS01 MG N/A GO:0004298 ... P25043 41033310
    1049227 9qck:Z (2.7) BS01 MG N/A GO:0003674 ... P23724 41033310
    1049228 9qcl:D (3.7) BS01 ATP N/A GO:0005524 ... Q2G0P5 41023306
    1049229 9qcl:E (3.7) BS01 ATP N/A GO:0005524 ... Q2G0P5 41023306
    1049230 9qcl:F (3.7) BS01 ATP N/A GO:0005524 ... Q2G0P5 41023306
    1049231 9qcl:I (3.7) BS01 ADP N/A GO:0005524 ... Q2G0P5 41023306
    1049232 9qcl:J (3.7) BS01 ATP N/A GO:0005524 ... Q2G0P5 41023306
    1049233 9qcl:K (3.7) BS01 ATP N/A GO:0005524 ... Q2G0P5 41023306
    1049234 9qcl:L (3.7) BS01 ATP N/A GO:0005524 ... Q2G0P5 41023306
    1049235 9qcl:M (3.7) BS01 ATP N/A GO:0005524 ... Q2G0P5 41023306
    1049236 9qcr:A (4.37) BS01 dna N/A GO:0000786 ... P68431 41444611
    1049237 9qcr:A (4.37) BS02 dna N/A GO:0000786 ... P68431 41444611
    1049238 9qcr:B (4.37) BS01 dna N/A GO:0000781 ... P62805 41444611
    1049239 9qcr:B (4.37) BS02 dna N/A GO:0000781 ... P62805 41444611
    1049240 9qcr:C (4.37) BS01 dna N/A GO:0000077 ... P16104 41444611
    1049241 9qcr:C (4.37) BS02 dna N/A GO:0000077 ... P16104 41444611
    1049242 9qcr:D (4.37) BS01 dna N/A GO:0000786 ... P06899 41444611
    1049243 9qcr:D (4.37) BS02 dna N/A GO:0000786 ... P06899 41444611
    1049244 9qcr:E (4.37) BS01 dna N/A GO:0000786 ... P68431 41444611
    1049245 9qcr:E (4.37) BS02 dna N/A GO:0000786 ... P68431 41444611
    1049246 9qcr:F (4.37) BS01 dna N/A GO:0000781 ... P62805 41444611
    1049247 9qcr:F (4.37) BS02 dna N/A GO:0000781 ... P62805 41444611
    1049248 9qcr:G (4.37) BS01 dna N/A GO:0000077 ... P16104 41444611
    1049249 9qcr:G (4.37) BS02 dna N/A GO:0000077 ... P16104 41444611
    1049250 9qcr:H (4.37) BS01 dna N/A GO:0000786 ... P06899 41444611
    1049251 9qcr:H (4.37) BS02 dna N/A GO:0000786 ... P06899 41444611
    1049252 9qcr:K (4.37) BS01 dna N/A GO:0000723 ... P12956 41444611
    1049253 9qcr:K (4.37) BS02 dna N/A GO:0000723 ... P12956 41444611
    1049254 9qcr:L (4.37) BS01 dna N/A GO:0000723 ... P13010 41444611
    1049255 9qcr:L (4.37) BS02 dna N/A GO:0000723 ... P13010 41444611
    1049256 9qcr:O (4.37) BS01 dna N/A GO:0000460 ... P78527 41444611
    1049257 9qcr:O (4.37) BS02 dna N/A GO:0000460 ... P78527 41444611
    1049258 9qcs:A (4.38) BS01 dna N/A GO:0000786 ... P68431 41444611
    1049259 9qcs:A (4.38) BS02 dna N/A GO:0000786 ... P68431 41444611
    1049260 9qcs:B (4.38) BS01 dna N/A GO:0000781 ... P62805 41444611
    1049261 9qcs:B (4.38) BS02 dna N/A GO:0000781 ... P62805 41444611
    1049262 9qcs:C (4.38) BS01 dna N/A GO:0000077 ... P16104 41444611
    1049263 9qcs:C (4.38) BS02 dna N/A GO:0000077 ... P16104 41444611
    1049264 9qcs:D (4.38) BS01 dna N/A GO:0000786 ... P06899 41444611
    1049265 9qcs:D (4.38) BS02 dna N/A GO:0000786 ... P06899 41444611
    1049266 9qcs:E (4.38) BS01 dna N/A GO:0000786 ... P68431 41444611
    1049267 9qcs:E (4.38) BS02 dna N/A GO:0000786 ... P68431 41444611
    1049268 9qcs:F (4.38) BS01 dna N/A GO:0000781 ... P62805 41444611
    1049269 9qcs:F (4.38) BS02 dna N/A GO:0000781 ... P62805 41444611
    1049270 9qcs:G (4.38) BS01 dna N/A GO:0000077 ... P16104 41444611
    1049271 9qcs:G (4.38) BS02 dna N/A GO:0000077 ... P16104 41444611
    1049272 9qcs:H (4.38) BS01 dna N/A GO:0000786 ... P06899 41444611
    1049273 9qcs:H (4.38) BS02 dna N/A GO:0000786 ... P06899 41444611
    1049274 9qcs:L (4.38) BS01 dna N/A GO:0000723 ... P13010 41444611
    1049275 9qcs:L (4.38) BS02 dna N/A GO:0000723 ... P13010 41444611
    1049276 9qcs:M (4.38) BS01 dna N/A GO:0000723 ... P12956 41444611
    1049277 9qcs:M (4.38) BS02 dna N/A GO:0000723 ... P12956 41444611
    1049278 9qcs:N (4.38) BS01 dna N/A GO:0000723 ... P13010 41444611
    1049279 9qcs:N (4.38) BS02 dna N/A GO:0000723 ... P13010 41444611
    1049280 9qcs:O (4.38) BS01 dna N/A GO:0000460 ... P78527 41444611
    1049281 9qcs:a (4.38) BS01 dna N/A GO:0000786 ... P68431 41444611
    1049282 9qcs:a (4.38) BS02 dna N/A GO:0000786 ... P68431 41444611
    1049283 9qcs:b (4.38) BS01 dna N/A GO:0000781 ... P62805 41444611
    1049284 9qcs:b (4.38) BS02 dna N/A GO:0000781 ... P62805 41444611
    1049285 9qcs:c (4.38) BS01 dna N/A GO:0000077 ... P16104 41444611
    1049286 9qcs:c (4.38) BS02 dna N/A GO:0000077 ... P16104 41444611
    1049287 9qcs:d (4.38) BS01 dna N/A GO:0000786 ... P06899 41444611
    1049288 9qcs:d (4.38) BS02 dna N/A GO:0000786 ... P06899 41444611
    1049289 9qcs:e (4.38) BS01 dna N/A GO:0000786 ... P68431 41444611
    1049290 9qcs:e (4.38) BS02 dna N/A GO:0000786 ... P68431 41444611
    1049291 9qcs:f (4.38) BS01 dna N/A GO:0000781 ... P62805 41444611
    1049292 9qcs:f (4.38) BS02 dna N/A GO:0000781 ... P62805 41444611
    1049293 9qcs:g (4.38) BS01 dna N/A GO:0000077 ... P16104 41444611
    1049294 9qcs:g (4.38) BS02 dna N/A GO:0000077 ... P16104 41444611
    1049295 9qcs:h (4.38) BS01 dna N/A GO:0000786 ... P06899 41444611
    1049296 9qcs:h (4.38) BS02 dna N/A GO:0000786 ... P06899 41444611
    1049297 9qcs:o (4.38) BS01 dna N/A GO:0000460 ... P78527 41444611
    1049298 9qcs:o (4.38) BS02 dna N/A GO:0000460 ... P78527 41444611
    1049299 9qct:A (1.75) BS01 ZN N/A N/A Q9RFN5 40723816
    1049300 9qct:B (1.75) BS01 ZN N/A N/A Q9RFN5 40723816
    1049301 9qct:C (1.75) BS01 ZN N/A N/A Q9RFN5 40723816
    1049302 9qct:D (1.75) BS01 ZN N/A N/A Q9RFN5 40723816
    1049303 9qcu:A (1.4) BS01 ZN N/A N/A Q9RFN5 40723816
    1049304 9qcu:B (1.4) BS01 ZN N/A N/A Q9RFN5 40723816
    1049305 9qcv:J (2.5) BS01 ANP N/A GO:0000439 ... P50613 41100585
    1049306 9qcv:J (2.5) BS02 ANP N/A GO:0000439 ... P50613 41100585
    1049307 9qcv:J (2.5) BS03 MG N/A GO:0000439 ... P50613 41100585
    1049308 9qcv:K (2.5) BS01 ANP N/A GO:0000082 ... P24941 41100585
    1049309 9qcw:A (1.95) BS01 ZN N/A N/A Q9RFN5 40723816
    1049310 9qcw:B (1.95) BS01 ZN N/A N/A Q9RFN5 40723816
    1049311 9qcy:A (1.7) BS01 ZN N/A N/A Q9RFN5 40723816
    1049312 9qcy:B (1.7) BS01 ZN N/A N/A Q9RFN5 40723816
    1049313 9qcy:C (1.7) BS01 ZN N/A N/A Q9RFN5 40723816
    1049314 9qcy:D (1.7) BS01 ZN N/A N/A Q9RFN5 40723816
    1049315 9qcz:A (1.6) BS01 ZN N/A N/A Q9RFN5 40723816
    1049316 9qcz:B (1.6) BS01 ZN N/A N/A Q9RFN5 40723816
    1049317 9qcz:C (1.6) BS01 ZN N/A N/A Q9RFN5 40723816
    1049318 9qcz:D (1.6) BS01 ZN N/A N/A Q9RFN5 40723816
    1049319 9qd2:G (2.7) BS01 MG N/A GO:0003674 ... P21243 41033310
    1049320 9qd2:H (2.7) BS01 peptide N/A GO:0004298 ... P25043 41033310
    1049321 9qd2:K (2.7) BS01 peptide N/A GO:0004298 ... P30656 41033310
    1049322 9qd2:N (2.7) BS01 peptide N/A GO:0004175 ... P38624 41033310
    1049323 9qd2:V (2.7) BS01 peptide N/A GO:0004298 ... P25043 41033310
    1049324 9qd2:Y (2.7) BS01 peptide N/A GO:0004298 ... P30656 41033310
    1049325 9qd2:Z (2.7) BS01 MG N/A GO:0003674 ... P23724 41033310
    1049326 9qd2:b (2.7) BS01 peptide N/A GO:0004175 ... P38624 41033310
    1049327 9qd3:A (1.7) BS01 GSH N/A N/A N/A N/A
    1049328 9qd3:B (1.7) BS01 GSH N/A N/A N/A N/A
    1049329 9qd3:C (1.7) BS01 GSH N/A N/A N/A N/A
    1049330 9qd3:D (1.7) BS01 GSH N/A N/A N/A N/A
    1049331 9qd4:A (3.112) BS01 A1I5W N/A N/A P20789 N/A
    1049332 9qd5:A (2.044) BS01 A1I6A N/A N/A P0DTD1 N/A
    1049333 9qd6:A (1.18) BS01 402 N/A GO:0008901 ... P07598 41756151
    1049334 9qd6:A (1.18) BS02 SF4 N/A GO:0008901 ... P07598 41756151
    1049335 9qd6:A (1.18) BS03 SF4 N/A GO:0008901 ... P07598 41756151
    1049336 9qd6:A (1.18) BS04 SF4 N/A GO:0008901 ... P07598 41756151
    1049337 9qd7:A (2.264) BS01 A1I5X N/A N/A Q13451 41273793
    1049338 9qd7:B (2.264) BS01 A1I5X N/A N/A Q13451 41273793
    1049339 9qd8:A (2.05) BS01 A1I53 N/A N/A Q13451 41273793
    1049340 9qd8:B (2.05) BS01 A1I53 N/A N/A Q13451 41273793
    1049341 9qd9:A (1.74) BS01 A1I54 N/A N/A Q13451 41273793
    1049342 9qd9:B (1.74) BS01 A1I54 N/A N/A Q13451 41273793
    1049343 9qda:A (2.0) BS01 A1I55 N/A N/A Q13451 41273793
    1049344 9qda:A (2.0) BS02 A1I55 N/A N/A Q13451 41273793
    1049345 9qda:B (2.0) BS01 A1I55 N/A N/A Q13451 41273793
    1049346 9qdb:A (2.05) BS01 A1I5Y N/A N/A Q13451 41273793
    1049347 9qdb:A (2.05) BS02 A1I5Y N/A N/A Q13451 41273793
    1049348 9qdb:B (2.05) BS01 A1I5Y N/A N/A Q13451 41273793
    1049349 9qdc:A (1.491) BS01 SF4 N/A N/A P07598 N/A
    1049350 9qdc:A (1.491) BS02 SF4 N/A N/A P07598 N/A
    1049351 9qdc:A (1.491) BS03 SF4 N/A N/A P07598 N/A
    1049352 9qdc:A (1.491) BS04 402 N/A N/A P07598 N/A
    1049353 9qdd:A (1.201) BS01 SF4 N/A N/A P07598 N/A
    1049354 9qdd:A (1.201) BS02 SF4 N/A N/A P07598 N/A
    1049355 9qdd:A (1.201) BS03 SF4 N/A N/A P07598 N/A
    1049356 9qdd:A (1.201) BS04 402 N/A N/A P07598 N/A
    1049357 9qdf:G (2.7) BS01 MG N/A GO:0003674 ... P21243 41033310
    1049358 9qdf:H (2.7) BS01 peptide N/A GO:0004298 ... P25043 41033310
    1049359 9qdf:K (2.7) BS01 peptide N/A GO:0004298 ... P30656 41033310
    1049360 9qdf:N (2.7) BS01 peptide N/A GO:0004175 ... P38624 41033310
    1049361 9qdf:V (2.7) BS01 peptide N/A GO:0004298 ... P25043 41033310
    1049362 9qdf:V (2.7) BS02 MG N/A GO:0004298 ... P25043 41033310
    1049363 9qdf:Y (2.7) BS01 peptide N/A GO:0004298 ... P30656 41033310
    1049364 9qdf:Z (2.7) BS01 MG N/A GO:0003674 ... P23724 41033310
    1049365 9qdf:b (2.7) BS01 peptide N/A GO:0004175 ... P38624 41033310
    1049366 9qdg:A (1.02) BS01 402 N/A N/A P07598 N/A
    1049367 9qdg:A (1.02) BS02 SF4 N/A N/A P07598 N/A
    1049368 9qdg:A (1.02) BS03 SF4 N/A N/A P07598 N/A
    1049369 9qdg:A (1.02) BS04 SF4 N/A N/A P07598 N/A
    1049370 9qdh:A (2.0) BS01 ZN N/A GO:0008237 ... Q9AES2 40745064
    1049371 9qdi:A (1.94) BS01 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049372 9qdi:A (1.94) BS02 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049373 9qdi:B (1.94) BS01 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049374 9qdi:B (1.94) BS02 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049375 9qdi:C (1.94) BS01 peptide N/A GO:0008237 ... Q5L9L3 40745064
    1049376 9qdi:C (1.94) BS02 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049377 9qdi:C (1.94) BS03 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049378 9qdi:C (1.94) BS04 POL N/A GO:0008237 ... Q5L9L3 40745064
    1049379 9qdi:D (1.94) BS01 peptide N/A GO:0008237 ... Q5L9L3 40745064
    1049380 9qdi:D (1.94) BS02 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049381 9qdi:D (1.94) BS03 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049382 9qdi:E (1.94) BS01 peptide N/A GO:0008237 ... Q5L9L3 40745064
    1049383 9qdi:E (1.94) BS02 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049384 9qdi:E (1.94) BS03 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049385 9qdi:E (1.94) BS04 POL N/A GO:0008237 ... Q5L9L3 40745064
    1049386 9qdi:F (1.94) BS01 peptide N/A GO:0008237 ... Q5L9L3 40745064
    1049387 9qdi:F (1.94) BS02 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049388 9qdi:F (1.94) BS03 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049389 9qdi:F (1.94) BS04 POL N/A GO:0008237 ... Q5L9L3 40745064
    1049390 9qdi:G (1.94) BS01 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049391 9qdi:G (1.94) BS02 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049392 9qdi:H (1.94) BS01 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049393 9qdi:H (1.94) BS02 ZN N/A GO:0008237 ... Q5L9L3 40745064
    1049394 9qdj:A (2.597) BS01 LYS N/A GO:0000049 ... P9WFU9 40749104
    1049395 9qdj:A (2.597) BS02 A1I60 N/A GO:0000049 ... P9WFU9 40749104
    1049396 9qdk:A (1.9) BS01 NDP N/A N/A O76290 N/A
    1049397 9qdk:A (1.9) BS02 QY8 N/A N/A O76290 N/A
    1049398 9qdk:A (1.9) BS03 AX8 N/A N/A O76290 N/A
    1049399 9qdk:B (1.9) BS01 NDP N/A N/A O76290 N/A
    1049400 9qdk:B (1.9) BS02 QY8 N/A N/A O76290 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).