SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1049401 9qdk:B (1.9) BS03 AX8 N/A N/A O76290 N/A
    1049402 9qdk:C (1.9) BS01 NDP N/A N/A O76290 N/A
    1049403 9qdk:C (1.9) BS02 QY8 N/A N/A O76290 N/A
    1049404 9qdk:C (1.9) BS03 AX8 N/A N/A O76290 N/A
    1049405 9qdk:D (1.9) BS01 AX8 N/A N/A O76290 N/A
    1049406 9qdk:D (1.9) BS02 NDP N/A N/A O76290 N/A
    1049407 9qdk:D (1.9) BS03 QY8 N/A N/A O76290 N/A
    1049408 9qdk:D (1.9) BS04 AX8 N/A N/A O76290 N/A
    1049409 9qdl:A (3.15) BS01 FAD N/A N/A Q00711 41606097
    1049410 9qdl:B (3.15) BS01 FES N/A N/A P21801 41606097
    1049411 9qdl:B (3.15) BS02 SF4 N/A N/A P21801 41606097
    1049412 9qdl:B (3.15) BS03 F3S N/A N/A P21801 41606097
    1049413 9qdl:C (3.15) BS01 A1J2J N/A N/A P33421 41606097
    1049414 9qdl:D (3.15) BS01 7PO N/A N/A P37298 41606097
    1049415 9qdm:A (3.0) BS01 FAD N/A GO:0005515 ... Q00711 41606097
    1049416 9qdm:B (3.0) BS01 FES N/A GO:0005515 ... P21801 41606097
    1049417 9qdm:B (3.0) BS02 SF4 N/A GO:0005515 ... P21801 41606097
    1049418 9qdm:B (3.0) BS03 F3S N/A GO:0005515 ... P21801 41606097
    1049419 9qdm:B (3.0) BS04 A1I6X N/A GO:0005515 ... P21801 41606097
    1049420 9qdm:C (3.0) BS01 A1I6X N/A GO:0005739 ... P33421 41606097
    1049421 9qdn:A (2.71) BS01 E2Q N/A GO:0004970 ... P19493 40954371
    1049422 9qdn:B (2.71) BS01 E2Q N/A GO:0004970 ... P19493 40954371
    1049423 9qdn:C (2.71) BS01 E2Q N/A GO:0004970 ... P19493 40954371
    1049424 9qdn:D (2.71) BS01 E2Q N/A GO:0004970 ... P19493 40954371
    1049425 9qdq:A (3.6) BS01 rna N/A GO:0000184 ... P30771 41076630
    1049426 9qds:G (2.8) BS01 MG N/A GO:0003674 ... P21243 41033310
    1049427 9qds:H (2.8) BS01 peptide N/A GO:0004298 ... P25043 41033310
    1049428 9qds:I (2.8) BS01 MG N/A GO:0005515 ... P25451 41033310
    1049429 9qds:K (2.8) BS01 peptide N/A GO:0004298 ... P30656 41033310
    1049430 9qds:L (2.8) BS01 peptide N/A GO:0003674 ... P23724 41033310
    1049431 9qds:N (2.8) BS01 peptide N/A GO:0004175 ... P38624 41033310
    1049432 9qds:V (2.8) BS01 peptide N/A GO:0004298 ... P25043 41033310
    1049433 9qds:V (2.8) BS02 peptide N/A GO:0004298 ... P25043 41033310
    1049434 9qds:V (2.8) BS03 MG N/A GO:0004298 ... P25043 41033310
    1049435 9qds:Y (2.8) BS01 peptide N/A GO:0004298 ... P30656 41033310
    1049436 9qds:Z (2.8) BS01 peptide N/A GO:0003674 ... P23724 41033310
    1049437 9qds:Z (2.8) BS02 MG N/A GO:0003674 ... P23724 41033310
    1049438 9qds:b (2.8) BS01 peptide N/A GO:0004175 ... P38624 41033310
    1049439 9qdt:A (2.572) BS01 HEC N/A GO:0004130 ... P37197 40669070
    1049440 9qdt:A (2.572) BS02 HEC N/A GO:0004130 ... P37197 40669070
    1049441 9qdt:A (2.572) BS03 HEM N/A GO:0004130 ... P37197 40669070
    1049442 9qdt:A (2.572) BS04 CA N/A GO:0004130 ... P37197 40669070
    1049443 9qdt:A (2.572) BS05 CA N/A GO:0004130 ... P37197 40669070
    1049444 9qdu:A (2.35) BS01 peptide N/A N/A Q14145 N/A
    1049445 9qdw:A (2.49) BS01 A1I5M N/A N/A N/A N/A
    1049446 9qdw:A (2.49) BS02 CA N/A N/A N/A N/A
    1049447 9qdw:A (2.49) BS03 CA N/A N/A N/A N/A
    1049448 9qdw:B (2.49) BS01 A1I5M N/A N/A N/A N/A
    1049449 9qdw:B (2.49) BS02 CA N/A N/A N/A N/A
    1049450 9qdw:B (2.49) BS03 CA N/A N/A N/A N/A
    1049451 9qdx:A (2.26) BS01 A1I6C N/A N/A Q8IVV7 N/A
    1049452 9qdy:A (2.1) BS01 A1I6B N/A N/A Q8IVV7 N/A
    1049453 9qdz:A (1.8) BS01 A1I6F N/A N/A Q8IVV7 N/A
    1049454 9qe1:A (3.5) BS01 ADP N/A N/A A0AB94IPK1 40628265
    1049455 9qe1:B (3.5) BS01 ADP N/A N/A A0AB94IPK1 40628265
    1049456 9qe2:A (2.3) BS01 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1049457 9qe2:A (2.3) BS02 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1049458 9qe2:A (2.3) BS03 PSF N/A GO:0016020 ... A0A0R4J1K2 41091875
    1049459 9qe2:A (2.3) BS04 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1049460 9qe2:A (2.3) BS05 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1049461 9qe2:A (2.3) BS06 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1049462 9qe2:A (2.3) BS07 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1049463 9qe2:A (2.3) BS08 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1049464 9qe2:A (2.3) BS09 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1049465 9qe2:A (2.3) BS10 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1049466 9qe2:A (2.3) BS11 PSF N/A GO:0016020 ... A0A0R4J1K2 41091875
    1049467 9qe3:A (2.06) BS01 SEK N/A GO:0004601 ... P05164 41043752
    1049468 9qe3:A (2.06) BS02 SEK N/A GO:0004601 ... P05164 41043752
    1049469 9qe3:A (2.06) BS03 HEM N/A GO:0004601 ... P05164 41043752
    1049470 9qe3:A (2.06) BS04 SEK N/A GO:0004601 ... P05164 41043752
    1049471 9qe3:B (2.06) BS01 MAN N/A GO:0004601 ... P05164 41043752
    1049472 9qe3:B (2.06) BS02 HEM N/A GO:0004601 ... P05164 41043752
    1049473 9qe3:B (2.06) BS03 SEK N/A GO:0004601 ... P05164 41043752
    1049474 9qe3:B (2.06) BS04 SEK N/A GO:0004601 ... P05164 41043752
    1049475 9qe3:B (2.06) BS05 SEK N/A GO:0004601 ... P05164 41043752
    1049476 9qe3:B (2.06) BS06 SEK N/A GO:0004601 ... P05164 41043752
    1049477 9qe3:B (2.06) BS07 SEK N/A GO:0004601 ... P05164 41043752
    1049478 9qe3:B (2.06) BS08 SEK N/A GO:0004601 ... P05164 41043752
    1049479 9qe3:B (2.06) BS09 SEK N/A GO:0004601 ... P05164 41043752
    1049480 9qe3:B (2.06) BS10 SEK N/A GO:0004601 ... P05164 41043752
    1049481 9qe3:B (2.06) BS11 SEK N/A GO:0004601 ... P05164 41043752
    1049482 9qe3:B (2.06) BS12 SEK N/A GO:0004601 ... P05164 41043752
    1049483 9qe3:B (2.06) BS13 CA N/A GO:0004601 ... P05164 41043752
    1049484 9qe3:C (2.06) BS01 SEK N/A GO:0004601 ... P05164 41043752
    1049485 9qe3:C (2.06) BS02 HEM N/A GO:0004601 ... P05164 41043752
    1049486 9qe3:C (2.06) BS03 SEK N/A GO:0004601 ... P05164 41043752
    1049487 9qe3:C (2.06) BS04 SEK N/A GO:0004601 ... P05164 41043752
    1049488 9qe3:D (2.06) BS01 MAN N/A GO:0004601 ... P05164 41043752
    1049489 9qe3:D (2.06) BS02 SEK N/A GO:0004601 ... P05164 41043752
    1049490 9qe3:D (2.06) BS03 HEM N/A GO:0004601 ... P05164 41043752
    1049491 9qe3:D (2.06) BS04 SEK N/A GO:0004601 ... P05164 41043752
    1049492 9qe3:D (2.06) BS05 SEK N/A GO:0004601 ... P05164 41043752
    1049493 9qe3:D (2.06) BS06 SEK N/A GO:0004601 ... P05164 41043752
    1049494 9qe3:D (2.06) BS07 SEK N/A GO:0004601 ... P05164 41043752
    1049495 9qe3:D (2.06) BS08 SEK N/A GO:0004601 ... P05164 41043752
    1049496 9qe3:D (2.06) BS09 SEK N/A GO:0004601 ... P05164 41043752
    1049497 9qe3:D (2.06) BS10 SEK N/A GO:0004601 ... P05164 41043752
    1049498 9qe3:D (2.06) BS11 SEK N/A GO:0004601 ... P05164 41043752
    1049499 9qe3:D (2.06) BS12 CA N/A GO:0004601 ... P05164 41043752
    1049500 9qe3:E (2.06) BS01 SEK N/A N/A Q2G0X2 41043752
    1049501 9qe3:F (2.06) BS01 SEK N/A N/A Q2G0X2 41043752
    1049502 9qe4:C (2.28) BS01 A1I57 N/A N/A P40337 40673806
    1049503 9qe4:F (2.28) BS01 A1I57 N/A N/A P40337 40673806
    1049504 9qe4:I (2.28) BS01 A1I57 N/A N/A P40337 40673806
    1049505 9qe4:L (2.28) BS01 A1I57 N/A N/A P40337 40673806
    1049506 9qe5:C (2.5) BS01 A1I58 N/A N/A P40337 40673806
    1049507 9qe5:F (2.5) BS01 A1I58 N/A N/A P40337 40673806
    1049508 9qe5:I (2.5) BS01 A1I58 N/A N/A P40337 40673806
    1049509 9qe5:L (2.5) BS01 A1I58 N/A N/A P40337 40673806
    1049510 9qea:A (2.3) BS01 LYS N/A GO:0000049 ... P9WFU9 40749104
    1049511 9qea:A (2.3) BS02 A1I61 N/A GO:0000049 ... P9WFU9 40749104
    1049512 9qec:B (2.9) BS01 peptide N/A GO:0000014 ... P07992 41402316
    1049513 9qed:A (3.2) BS01 peptide N/A GO:0000109 ... Q92889 41402316
    1049514 9qee:A (3.4) BS01 dna N/A GO:0000109 ... Q92889 41402316
    1049515 9qee:A (3.4) BS02 dna N/A GO:0000109 ... Q92889 41402316
    1049516 9qee:A (3.4) BS03 MN N/A GO:0000109 ... Q92889 41402316
    1049517 9qee:B (3.4) BS01 dna N/A GO:0000014 ... P07992 41402316
    1049518 9qee:B (3.4) BS02 dna N/A GO:0000014 ... P07992 41402316
    1049519 9qef:C (2.5) BS01 HEC N/A N/A A0R050 41372535
    1049520 9qef:C (2.5) BS02 HEC N/A N/A A0R050 41372535
    1049521 9qef:C (2.5) BS03 MQ9 N/A N/A A0R050 41372535
    1049522 9qef:C (2.5) BS04 WUO N/A N/A A0R050 41372535
    1049523 9qef:C (2.5) BS05 MQ9 N/A N/A A0R050 41372535
    1049524 9qef:G (2.5) BS01 peptide N/A GO:0004497 ... A0R051 41372535
    1049525 9qef:G (2.5) BS02 9YF N/A GO:0004497 ... A0R051 41372535
    1049526 9qef:G (2.5) BS03 FES N/A GO:0004497 ... A0R051 41372535
    1049527 9qef:G (2.5) BS04 IZL N/A GO:0004497 ... A0R051 41372535
    1049528 9qef:G (2.5) BS05 9YF N/A GO:0004497 ... A0R051 41372535
    1049529 9qef:H (2.5) BS01 peptide N/A GO:0005886 ... A0R052 41372535
    1049530 9qef:H (2.5) BS02 9YF N/A GO:0005886 ... A0R052 41372535
    1049531 9qef:H (2.5) BS03 MQ9 N/A GO:0005886 ... A0R052 41372535
    1049532 9qef:H (2.5) BS04 MQ9 N/A GO:0005886 ... A0R052 41372535
    1049533 9qef:H (2.5) BS05 IZL N/A GO:0005886 ... A0R052 41372535
    1049534 9qef:H (2.5) BS06 HEM N/A GO:0005886 ... A0R052 41372535
    1049535 9qef:H (2.5) BS07 MQ9 N/A GO:0005886 ... A0R052 41372535
    1049536 9qef:H (2.5) BS08 HEM N/A GO:0005886 ... A0R052 41372535
    1049537 9qef:H (2.5) BS09 DCQ N/A GO:0005886 ... A0R052 41372535
    1049538 9qef:H (2.5) BS10 9YF N/A GO:0005886 ... A0R052 41372535
    1049539 9qef:I (2.5) BS01 WUO N/A N/A A0QVH4 41372535
    1049540 9qef:I (2.5) BS02 9YF N/A N/A A0QVH4 41372535
    1049541 9qef:K (2.5) BS01 WUO N/A GO:0004129 ... A0R056 41372535
    1049542 9qef:K (2.5) BS02 MQ9 N/A GO:0004129 ... A0R056 41372535
    1049543 9qef:L (2.5) BS01 MQ9 N/A GO:0004129 ... A0A2U9PNL2 41372535
    1049544 9qef:L (2.5) BS02 HEA N/A GO:0004129 ... A0A2U9PNL2 41372535
    1049545 9qef:L (2.5) BS03 HEA N/A GO:0004129 ... A0A2U9PNL2 41372535
    1049546 9qef:L (2.5) BS04 CU N/A GO:0004129 ... A0A2U9PNL2 41372535
    1049547 9qef:L (2.5) BS05 CA N/A GO:0004129 ... A0A2U9PNL2 41372535
    1049548 9qef:M (2.5) BS01 peptide N/A GO:0004497 ... A0R051 41372535
    1049549 9qef:M (2.5) BS02 FES N/A GO:0004497 ... A0R051 41372535
    1049550 9qef:M (2.5) BS03 IZL N/A GO:0004497 ... A0R051 41372535
    1049551 9qef:M (2.5) BS04 9YF N/A GO:0004497 ... A0R051 41372535
    1049552 9qef:M (2.5) BS05 9YF N/A GO:0004497 ... A0R051 41372535
    1049553 9qef:N (2.5) BS01 peptide N/A GO:0005886 ... A0R052 41372535
    1049554 9qef:N (2.5) BS02 MQ9 N/A GO:0005886 ... A0R052 41372535
    1049555 9qef:N (2.5) BS03 IZL N/A GO:0005886 ... A0R052 41372535
    1049556 9qef:N (2.5) BS04 HEM N/A GO:0005886 ... A0R052 41372535
    1049557 9qef:N (2.5) BS05 MQ9 N/A GO:0005886 ... A0R052 41372535
    1049558 9qef:N (2.5) BS06 HEM N/A GO:0005886 ... A0R052 41372535
    1049559 9qef:N (2.5) BS07 MQ9 N/A GO:0005886 ... A0R052 41372535
    1049560 9qef:N (2.5) BS08 9XX N/A GO:0005886 ... A0R052 41372535
    1049561 9qef:N (2.5) BS09 MQ9 N/A GO:0005886 ... A0R052 41372535
    1049562 9qef:N (2.5) BS10 9YF N/A GO:0005886 ... A0R052 41372535
    1049563 9qef:N (2.5) BS11 9YF N/A GO:0005886 ... A0R052 41372535
    1049564 9qef:O (2.5) BS01 HEC N/A N/A A0R050 41372535
    1049565 9qef:O (2.5) BS02 HEC N/A N/A A0R050 41372535
    1049566 9qef:O (2.5) BS03 MQ9 N/A N/A A0R050 41372535
    1049567 9qef:O (2.5) BS04 WUO N/A N/A A0R050 41372535
    1049568 9qef:O (2.5) BS05 MQ9 N/A N/A A0R050 41372535
    1049569 9qef:P (2.5) BS01 WUO N/A N/A A0QVH4 41372535
    1049570 9qef:P (2.5) BS02 9YF N/A N/A A0QVH4 41372535
    1049571 9qef:Q (2.5) BS01 HEA N/A GO:0004129 ... A0R057 41372535
    1049572 9qef:Q (2.5) BS02 CU N/A GO:0004129 ... A0R057 41372535
    1049573 9qef:Q (2.5) BS03 CU N/A GO:0004129 ... A0R057 41372535
    1049574 9qef:R (2.5) BS01 MQ9 N/A GO:0004129 ... A0A2U9PNL2 41372535
    1049575 9qef:R (2.5) BS02 HEA N/A GO:0004129 ... A0A2U9PNL2 41372535
    1049576 9qef:R (2.5) BS03 HEA N/A GO:0004129 ... A0A2U9PNL2 41372535
    1049577 9qef:R (2.5) BS04 CU N/A GO:0004129 ... A0A2U9PNL2 41372535
    1049578 9qef:R (2.5) BS05 CA N/A GO:0004129 ... A0A2U9PNL2 41372535
    1049579 9qef:R (2.5) BS06 9XX N/A GO:0004129 ... A0A2U9PNL2 41372535
    1049580 9qef:T (2.5) BS01 WUO N/A GO:0004129 ... A0R056 41372535
    1049581 9qef:T (2.5) BS02 MQ9 N/A GO:0004129 ... A0R056 41372535
    1049582 9qef:W (2.5) BS01 HEC N/A N/A A0R562 41372535
    1049583 9qef:W (2.5) BS02 9YF N/A N/A A0R562 41372535
    1049584 9qef:X (2.5) BS01 CU N/A GO:0004129 ... A0R057 41372535
    1049585 9qef:X (2.5) BS02 CU N/A GO:0004129 ... A0R057 41372535
    1049586 9qef:b (2.5) BS01 HEC N/A N/A A0R562 41372535
    1049587 9qef:b (2.5) BS02 WUO N/A N/A A0R562 41372535
    1049588 9qef:b (2.5) BS03 9YF N/A N/A A0R562 41372535
    1049589 9qeg:1 (2.21) BS01 rna N/A GO:0003735 ... Q2FH98 40490363
    1049590 9qeg:1 (2.21) BS02 ZN N/A GO:0003735 ... Q2FH98 40490363
    1049591 9qeg:13 (2.21) BS01 rna N/A GO:0003735 ... Q2FF08 40490363
    1049592 9qeg:2 (2.21) BS01 rna N/A GO:0003735 ... Q2FDE6 40490363
    1049593 9qeg:3 (2.21) BS01 rna N/A GO:0003735 ... Q2FG57 40490363
    1049594 9qeg:4 (2.21) BS01 rna N/A GO:0003735 ... Q2FER2 40490363
    1049595 9qeg:4 (2.21) BS02 ZN N/A GO:0003735 ... Q2FER2 40490363
    1049596 9qeg:Ab (2.21) BS01 rna N/A GO:0003735 ... Q2FHI2 40490363
    1049597 9qeg:Ac (2.21) BS01 rna N/A GO:0003676 ... Q2FEP5 40490363
    1049598 9qeg:Ad (2.21) BS01 rna N/A GO:0003723 ... Q2FG18 40490363
    1049599 9qeg:Ae (2.21) BS01 rna N/A GO:0003723 ... Q2FEQ6 40490363
    1049600 9qeg:Af (2.21) BS01 rna N/A GO:0003735 ... Q2FJP8 40490363

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).