SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1049601 9qeg:Ag (2.21) BS01 rna N/A GO:0000049 ... Q2FJ94 40490363
    1049602 9qeg:Ag (2.21) BS02 rna N/A GO:0000049 ... Q2FJ94 40490363
    1049603 9qeg:Ah (2.21) BS01 rna N/A GO:0003735 ... Q2FEQ3 40490363
    1049604 9qeg:Ai (2.21) BS01 rna N/A GO:0003723 ... Q2FES2 40490363
    1049605 9qeg:Aj (2.21) BS01 rna N/A GO:0000049 ... Q2FEN8 40490363
    1049606 9qeg:Ak (2.21) BS01 rna N/A GO:0003735 ... Q2FER4 40490363
    1049607 9qeg:Al (2.21) BS01 rna N/A GO:0000049 ... Q2FJ95 40490363
    1049608 9qeg:Am (2.21) BS01 rna N/A GO:0000049 ... Q2FER3 40490363
    1049609 9qeg:An (2.21) BS01 rna N/A GO:0003735 ... Q2FEQ2 40490363
    1049610 9qeg:An (2.21) BS02 ZN N/A GO:0003735 ... Q2FEQ2 40490363
    1049611 9qeg:Ao (2.21) BS01 rna N/A GO:0003735 ... Q2FHG5 40490363
    1049612 9qeg:Ao (2.21) BS02 rna N/A GO:0003735 ... Q2FHG5 40490363
    1049613 9qeg:Ap (2.21) BS01 rna N/A GO:0003735 ... Q2FHK0 40490363
    1049614 9qeg:Aq (2.21) BS01 rna N/A GO:0003735 ... Q2FEP8 40490363
    1049615 9qeg:Ar (2.21) BS01 rna N/A GO:0003735 ... Q2FJP6 40490363
    1049616 9qeg:As (2.21) BS01 rna N/A GO:0000028 ... Q2FEP3 40490363
    1049617 9qeg:At (2.21) BS01 rna N/A GO:0003723 ... Q2FGD8 40490363
    1049618 9qeg:C (2.21) BS01 rna N/A GO:0002181 ... Q2FEP2 40490363
    1049619 9qeg:D (2.21) BS01 rna N/A GO:0003735 ... Q2FEN9 40490363
    1049620 9qeg:E (2.21) BS01 rna N/A GO:0003735 ... Q2FEP0 40490363
    1049621 9qeg:F (2.21) BS01 rna N/A GO:0000049 ... Q2FEQ1 40490363
    1049622 9qeg:F (2.21) BS02 rna N/A GO:0000049 ... Q2FEQ1 40490363
    1049623 9qeg:G (2.21) BS01 rna N/A GO:0002181 ... Q2FEQ4 40490363
    1049624 9qeg:H (2.21) BS01 rna N/A GO:0003729 ... Q2FES1 40490363
    1049625 9qeg:I (2.21) BS01 rna N/A GO:0003735 ... Q2FEP9 40490363
    1049626 9qeg:J (2.21) BS01 rna N/A GO:0003735 ... Q2FEQ8 40490363
    1049627 9qeg:K (2.21) BS01 rna N/A GO:0003735 ... Q2FEP6 40490363
    1049628 9qeg:K (2.21) BS02 rna N/A GO:0003735 ... Q2FEP6 40490363
    1049629 9qeg:L (2.21) BS01 rna N/A GO:0003735 ... Q2FER6 40490363
    1049630 9qeg:L (2.21) BS02 MG N/A GO:0003735 ... Q2FER6 40490363
    1049631 9qeg:M (2.21) BS01 rna N/A GO:0003735 ... Q2FEQ5 40490363
    1049632 9qeg:M (2.21) BS02 rna N/A GO:0003735 ... Q2FEQ5 40490363
    1049633 9qeg:N (2.21) BS01 rna N/A GO:0003735 ... Q2FHJ7 40490363
    1049634 9qeg:N (2.21) BS02 rna N/A GO:0003735 ... Q2FHJ7 40490363
    1049635 9qeg:O (2.21) BS01 rna N/A GO:0000027 ... Q2FG58 40490363
    1049636 9qeg:P (2.21) BS01 rna N/A GO:0003723 ... Q2FG80 40490363
    1049637 9qeg:Q (2.21) BS01 rna N/A GO:0003735 ... Q2FEP4 40490363
    1049638 9qeg:R (2.21) BS01 rna N/A GO:0003735 ... Q2FEP1 40490363
    1049639 9qeg:S (2.21) BS01 rna N/A GO:0003723 ... Q2FEQ0 40490363
    1049640 9qeg:T (2.21) BS01 rna N/A GO:0003723 ... Q2FJE0 40490363
    1049641 9qeg:U (2.21) BS01 rna N/A GO:0003735 ... Q2FG82 40490363
    1049642 9qeg:U (2.21) BS02 rna N/A GO:0003735 ... Q2FG82 40490363
    1049643 9qeg:V (2.21) BS01 rna N/A GO:0003735 ... Q2FHL4 40490363
    1049644 9qeg:W (2.21) BS01 rna N/A GO:0003735 ... A0A0H2XHC7 40490363
    1049645 9qeg:X (2.21) BS01 rna N/A GO:0003735 ... Q2FEQ7 40490363
    1049646 9qeg:X (2.21) BS02 rna N/A GO:0003735 ... Q2FEQ7 40490363
    1049647 9qeg:Z (2.21) BS01 rna N/A GO:0003735 ... Q2FHV3 40490363
    1049648 9qeh:1 (2.08) BS01 rna N/A GO:0003735 ... Q2FH98 40490363
    1049649 9qeh:1 (2.08) BS02 ZN N/A GO:0003735 ... Q2FH98 40490363
    1049650 9qeh:2 (2.08) BS01 rna N/A GO:0003735 ... Q2FDE6 40490363
    1049651 9qeh:3 (2.08) BS01 rna N/A GO:0003735 ... Q2FG57 40490363
    1049652 9qeh:4 (2.08) BS01 rna N/A GO:0003735 ... Q2FER2 40490363
    1049653 9qeh:4 (2.08) BS02 ZN N/A GO:0003735 ... Q2FER2 40490363
    1049654 9qeh:C (2.08) BS01 rna N/A GO:0002181 ... Q2FEP2 40490363
    1049655 9qeh:D (2.08) BS01 rna N/A GO:0003735 ... Q2FEN9 40490363
    1049656 9qeh:E (2.08) BS01 rna N/A GO:0003735 ... Q2FEP0 40490363
    1049657 9qeh:F (2.08) BS01 rna N/A GO:0000049 ... Q2FEQ1 40490363
    1049658 9qeh:F (2.08) BS02 rna N/A GO:0000049 ... Q2FEQ1 40490363
    1049659 9qeh:G (2.08) BS01 rna N/A GO:0002181 ... Q2FEQ4 40490363
    1049660 9qeh:H (2.08) BS01 rna N/A GO:0003729 ... Q2FES1 40490363
    1049661 9qeh:I (2.08) BS01 rna N/A GO:0003735 ... Q2FEP9 40490363
    1049662 9qeh:J (2.08) BS01 rna N/A GO:0003735 ... Q2FEQ8 40490363
    1049663 9qeh:K (2.08) BS01 rna N/A GO:0003735 ... Q2FEP6 40490363
    1049664 9qeh:K (2.08) BS02 rna N/A GO:0003735 ... Q2FEP6 40490363
    1049665 9qeh:L (2.08) BS01 rna N/A GO:0003735 ... Q2FER6 40490363
    1049666 9qeh:L (2.08) BS02 MG N/A GO:0003735 ... Q2FER6 40490363
    1049667 9qeh:M (2.08) BS01 rna N/A GO:0003735 ... Q2FEQ5 40490363
    1049668 9qeh:M (2.08) BS02 rna N/A GO:0003735 ... Q2FEQ5 40490363
    1049669 9qeh:N (2.08) BS01 rna N/A GO:0003735 ... Q2FHJ7 40490363
    1049670 9qeh:O (2.08) BS01 rna N/A GO:0000027 ... Q2FG58 40490363
    1049671 9qeh:P (2.08) BS01 rna N/A GO:0003723 ... Q2FG80 40490363
    1049672 9qeh:Q (2.08) BS01 rna N/A GO:0003735 ... Q2FEP4 40490363
    1049673 9qeh:R (2.08) BS01 rna N/A GO:0003735 ... Q2FEP1 40490363
    1049674 9qeh:S (2.08) BS01 rna N/A GO:0003723 ... Q2FEQ0 40490363
    1049675 9qeh:T (2.08) BS01 rna N/A GO:0003723 ... Q2FJE0 40490363
    1049676 9qeh:U (2.08) BS01 rna N/A GO:0003735 ... Q2FG82 40490363
    1049677 9qeh:U (2.08) BS02 rna N/A GO:0003735 ... Q2FG82 40490363
    1049678 9qeh:V (2.08) BS01 rna N/A GO:0003735 ... Q2FHL4 40490363
    1049679 9qeh:V (2.08) BS02 rna N/A GO:0003735 ... Q2FHL4 40490363
    1049680 9qeh:W (2.08) BS01 rna N/A GO:0003735 ... A0A0H2XHC7 40490363
    1049681 9qeh:X (2.08) BS01 rna N/A GO:0003735 ... Q2FEQ7 40490363
    1049682 9qeh:X (2.08) BS02 rna N/A GO:0003735 ... Q2FEQ7 40490363
    1049683 9qeh:Z (2.08) BS01 rna N/A GO:0003735 ... Q2FHV3 40490363
    1049684 9qeh:Z (2.08) BS02 ZN N/A GO:0003735 ... Q2FHV3 40490363
    1049685 9qei:A (2.4) BS01 LYS N/A GO:0000049 ... P9WFU9 40749104
    1049686 9qei:A (2.4) BS02 A1I62 N/A GO:0000049 ... P9WFU9 40749104
    1049687 9qek:A (2.205) BS01 A1I6Z N/A GO:0004672 ... P08922 40299789
    1049688 9qel:B (1.86) BS01 S76 N/A GO:0003723 ... Q9Y5A9 40860041
    1049689 9qem:A (2.26) BS01 A1I56 N/A GO:0003723 ... Q9Y5A9 40860041
    1049690 9qem:B (2.26) BS01 A1I56 N/A GO:0003723 ... Q9Y5A9 40860041
    1049691 9qeo:A (1.98) BS01 A1I6E N/A GO:0003723 ... Q9Y5A9 40860041
    1049692 9qeq:A (3.5) BS01 dna N/A GO:0001172 ... A0A8D1DPV6 40595577
    1049693 9qeq:A (3.5) BS02 rna N/A GO:0001172 ... A0A8D1DPV6 40595577
    1049694 9qeq:A (3.5) BS03 dna N/A GO:0001172 ... A0A8D1DPV6 40595577
    1049695 9qeq:A (3.5) BS04 ZN N/A GO:0001172 ... A0A8D1DPV6 40595577
    1049696 9qeq:A (3.5) BS05 ZN N/A GO:0001172 ... A0A8D1DPV6 40595577
    1049697 9qeq:A (3.5) BS06 MG N/A GO:0001172 ... A0A8D1DPV6 40595577
    1049698 9qeq:B (3.5) BS01 dna N/A GO:0001172 ... A0A0B8RVL1 40595577
    1049699 9qeq:B (3.5) BS02 rna N/A GO:0001172 ... A0A0B8RVL1 40595577
    1049700 9qeq:B (3.5) BS03 dna N/A GO:0001172 ... A0A0B8RVL1 40595577
    1049701 9qeq:B (3.5) BS04 ZN N/A GO:0001172 ... A0A0B8RVL1 40595577
    1049702 9qeq:C (3.5) BS01 ZN N/A GO:0003677 ... I3LCH3 40595577
    1049703 9qeq:E (3.5) BS01 dna N/A GO:0003677 ... I3LSI7 40595577
    1049704 9qeq:I (3.5) BS01 ZN N/A GO:0001193 ... P60899 40595577
    1049705 9qeq:I (3.5) BS02 ZN N/A GO:0001193 ... P60899 40595577
    1049706 9qeq:J (3.5) BS01 ZN N/A GO:0003677 ... A0A8W4F9W9 40595577
    1049707 9qeq:L (3.5) BS01 ZN N/A GO:0001650 ... A0A4X1TRS6 40595577
    1049708 9qeq:b (3.5) BS01 rna N/A GO:0000387 ... P08621 40595577
    1049709 9qeq:c (3.5) BS01 rna N/A GO:0000387 ... P09012 40595577
    1049710 9qeq:e (3.5) BS01 rna N/A GO:0000244 ... P62316 40595577
    1049711 9qeq:f (3.5) BS01 rna N/A GO:0000244 ... P62306 40595577
    1049712 9qeq:g (3.5) BS01 rna N/A GO:0000244 ... P62304 40595577
    1049713 9qeq:h (3.5) BS01 rna N/A GO:0000244 ... P62308 40595577
    1049714 9qeq:i (3.5) BS01 rna N/A GO:0000243 ... P62318 40595577
    1049715 9qeq:j (3.5) BS01 rna N/A GO:0003723 ... Q66K91 40595577
    1049716 9qeq:k (3.5) BS01 rna N/A GO:0000243 ... P62314 40595577
    1049717 9qeu:A (1.353) BS01 A1I6K N/A N/A Q9UNE7 40832528
    1049718 9qev:A (1.11) BS01 ZN N/A N/A G0V3M6 41294346
    1049719 9qev:B (1.11) BS01 ZN N/A N/A G0V3M6 41294346
    1049720 9qev:C (1.11) BS01 ZN N/A N/A G0V3M6 41294346
    1049721 9qew:A (2.18) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049722 9qew:A (2.18) BS02 PO4 N/A GO:0000776 ... P60709 41075793
    1049723 9qew:B (2.18) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049724 9qew:B (2.18) BS02 PO4 N/A GO:0000776 ... P60709 41075793
    1049725 9qew:C (2.18) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049726 9qew:C (2.18) BS02 PO4 N/A GO:0000776 ... P60709 41075793
    1049727 9qew:D (2.18) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049728 9qew:D (2.18) BS02 PO4 N/A GO:0000776 ... P60709 41075793
    1049729 9qew:E (2.18) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049730 9qew:E (2.18) BS02 PO4 N/A GO:0000776 ... P60709 41075793
    1049731 9qex:A (1.903) BS01 HEM N/A GO:0004601 ... P05164 41043752
    1049732 9qex:A (1.903) BS02 SCN N/A GO:0004601 ... P05164 41043752
    1049733 9qex:B (1.903) BS01 MAN N/A GO:0004601 ... P05164 41043752
    1049734 9qex:B (1.903) BS02 CA N/A GO:0004601 ... P05164 41043752
    1049735 9qex:B (1.903) BS03 SCN N/A GO:0004601 ... P05164 41043752
    1049736 9qex:B (1.903) BS04 SCN N/A GO:0004601 ... P05164 41043752
    1049737 9qex:B (1.903) BS05 SCN N/A GO:0004601 ... P05164 41043752
    1049738 9qex:B (1.903) BS06 SCN N/A GO:0004601 ... P05164 41043752
    1049739 9qex:B (1.903) BS07 SCN N/A GO:0004601 ... P05164 41043752
    1049740 9qex:B (1.903) BS08 SCN N/A GO:0004601 ... P05164 41043752
    1049741 9qex:B (1.903) BS09 HEM N/A GO:0004601 ... P05164 41043752
    1049742 9qex:B (1.903) BS10 SCN N/A GO:0004601 ... P05164 41043752
    1049743 9qex:C (1.903) BS01 HEM N/A GO:0004601 ... P05164 41043752
    1049744 9qex:C (1.903) BS02 SCN N/A GO:0004601 ... P05164 41043752
    1049745 9qex:D (1.903) BS01 MAN N/A GO:0004601 ... P05164 41043752
    1049746 9qex:D (1.903) BS02 FUC N/A GO:0004601 ... P05164 41043752
    1049747 9qex:D (1.903) BS03 CA N/A GO:0004601 ... P05164 41043752
    1049748 9qex:D (1.903) BS04 SCN N/A GO:0004601 ... P05164 41043752
    1049749 9qex:D (1.903) BS05 HEM N/A GO:0004601 ... P05164 41043752
    1049750 9qex:D (1.903) BS06 SCN N/A GO:0004601 ... P05164 41043752
    1049751 9qey:A (2.74) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049752 9qey:A (2.74) BS02 PO4 N/A GO:0000776 ... P60709 41075793
    1049753 9qey:B (2.74) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049754 9qey:B (2.74) BS02 PO4 N/A GO:0000776 ... P60709 41075793
    1049755 9qey:C (2.74) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049756 9qey:C (2.74) BS02 PO4 N/A GO:0000776 ... P60709 41075793
    1049757 9qey:D (2.74) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049758 9qey:D (2.74) BS02 PO4 N/A GO:0000776 ... P60709 41075793
    1049759 9qey:E (2.74) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049760 9qey:E (2.74) BS02 PO4 N/A GO:0000776 ... P60709 41075793
    1049761 9qez:A (2.1) BS01 peptide N/A N/A G0V3M6 41294346
    1049762 9qez:A (2.1) BS02 ZN N/A N/A G0V3M6 41294346
    1049763 9qez:B (2.1) BS01 ZN N/A N/A G0V3M6 41294346
    1049764 9qez:C (2.1) BS01 ZN N/A N/A G0V3M6 41294346
    1049765 9qez:D (2.1) BS01 ZN N/A N/A G0V3M6 41294346
    1049766 9qez:E (2.1) BS01 ZN N/A N/A G0V3M6 41294346
    1049767 9qez:F (2.1) BS01 peptide N/A N/A G0V3M6 41294346
    1049768 9qez:F (2.1) BS02 ZN N/A N/A G0V3M6 41294346
    1049769 9qez:G (2.1) BS01 ZN N/A N/A G0V3M6 41294346
    1049770 9qez:H (2.1) BS01 ZN N/A N/A G0V3M6 41294346
    1049771 9qez:I (2.1) BS01 ZN N/A N/A G0V3M6 41294346
    1049772 9qf1:A (1.511) BS01 A1I5T N/A N/A Q9UNE7 40832528
    1049773 9qf2:A (2.42) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049774 9qf2:B (2.42) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049775 9qf2:C (2.42) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049776 9qf2:D (2.42) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049777 9qf2:E (2.42) BS01 ADP N/A GO:0000776 ... P60709 41075793
    1049778 9qf4:Aa (2.59) BS01 rna N/A GO:0003735 ... Q8U0F0 41130207
    1049779 9qf4:Ab (2.59) BS01 rna N/A GO:0003676 ... Q8U004 41130207
    1049780 9qf4:Ac (2.59) BS01 rna N/A GO:0003735 ... Q8TZE1 41130207
    1049781 9qf4:Ad (2.59) BS01 rna N/A GO:0003723 ... P61993 41130207
    1049782 9qf4:Ae (2.59) BS01 rna N/A GO:0003723 ... Q8U011 41130207
    1049783 9qf4:Af (2.59) BS01 rna N/A GO:0003723 ... Q8U017 41130207
    1049784 9qf4:Af (2.59) BS02 ZN N/A GO:0003723 ... Q8U017 41130207
    1049785 9qf4:Ag (2.59) BS01 rna N/A GO:0003735 ... Q8U3H8 41130207
    1049786 9qf4:Ah (2.59) BS01 rna N/A GO:0003735 ... Q8U0M8 41130207
    1049787 9qf4:Ai (2.59) BS01 rna N/A GO:0003735 ... Q8U014 41130207
    1049788 9qf4:Aj (2.59) BS01 rna N/A GO:0003735 ... Q8U1Y5 41130207
    1049789 9qf4:Aj (2.59) BS02 rna N/A GO:0003735 ... Q8U1Y5 41130207
    1049790 9qf4:Ak (2.59) BS01 rna N/A GO:0000462 ... Q8U0E7 41130207
    1049791 9qf4:Al (2.59) BS01 rna N/A GO:0000049 ... P61885 41130207
    1049792 9qf4:Am (2.59) BS01 rna N/A GO:0003735 ... Q8U0E3 41130207
    1049793 9qf4:An (2.59) BS01 rna N/A GO:0003735 ... P61995 41130207
    1049794 9qf4:Ao (2.59) BS01 rna N/A GO:0003676 ... Q8U0E2 41130207
    1049795 9qf4:Ao (2.59) BS02 rna N/A GO:0003676 ... Q8U0E2 41130207
    1049796 9qf4:Ap (2.59) BS01 rna N/A GO:0002181 ... Q8U013 41130207
    1049797 9qf4:Ap (2.59) BS02 ZN N/A GO:0002181 ... Q8U013 41130207
    1049798 9qf4:Aq (2.59) BS01 rna N/A GO:0003735 ... Q8TZD9 41130207
    1049799 9qf4:Aq (2.59) BS02 rna N/A GO:0003735 ... Q8TZD9 41130207
    1049800 9qf4:Ar (2.59) BS01 rna N/A GO:0003735 ... Q8U008 41130207

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).