SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    104801 2r86:A (2.5) BS01 PO4 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104802 2r86:A (2.5) BS02 PO4 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104803 2r86:A (2.5) BS03 ATP 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104804 2r86:B (2.5) BS01 PO4 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104805 2r86:B (2.5) BS02 PO4 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104806 2r86:B (2.5) BS03 ATP 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104807 2r87:A (2.3) BS01 ADP 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104808 2r87:B (2.3) BS01 ADP 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104809 2r87:C (2.3) BS01 ADP 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104810 2r87:D (2.3) BS01 ADP 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104811 2r87:E (2.3) BS01 ADP 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104812 2r87:F (2.3) BS01 ADP 6.3.4.23 GO:0000287 ... Q8U0R7 18069798
    104813 2r8a:A (3.0) BS01 C8E ? GO:0009279 ... P10384 21593406
    104814 2r8a:A (3.0) BS02 C8E ? GO:0009279 ... P10384 21593406
    104815 2r8a:B (3.0) BS01 C8E ? GO:0009279 ... P10384 21593406
    104816 2r8a:B (3.0) BS02 C8E ? GO:0009279 ... P10384 21593406
    104817 2r8a:B (3.0) BS03 C8E ? GO:0009279 ... P10384 21593406
    104818 2r8d:A (2.0) BS01 MN ? GO:0050660 ... Q87DZ3 N/A
    104819 2r8e:A (1.4) BS01 MG 3.1.3.45 GO:0008781 ... P67653 19726684
    104820 2r8e:B (1.4) BS01 MG 3.1.3.45 GO:0008781 ... P67653 19726684
    104821 2r8e:C (1.4) BS01 MG 3.1.3.45 GO:0008781 ... P67653 19726684
    104822 2r8e:D (1.4) BS01 MG 3.1.3.45 GO:0008781 ... P67653 19726684
    104823 2r8e:E (1.4) BS01 MG 3.1.3.45 GO:0008781 ... P67653 19726684
    104824 2r8e:F (1.4) BS01 MG 3.1.3.45 GO:0008781 ... P67653 19726684
    104825 2r8e:G (1.4) BS01 MG 3.1.3.45 GO:0008781 ... P67653 19726684
    104826 2r8e:H (1.4) BS01 MG 3.1.3.45 GO:0008781 ... P67653 19726684
    104827 2r8f:A (2.8) BS01 PO4 3.6.4.- GO:0000166 ... Q03243 17804496
    104828 2r8f:A (2.8) BS02 AGS 3.6.4.- GO:0000166 ... Q03243 17804496
    104829 2r8g:A (2.7) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104830 2r8g:A (2.7) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104831 2r8g:A (2.7) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104832 2r8g:A (2.7) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104833 2r8g:A (2.7) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104834 2r8g:A (2.7) BS06 DGT 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104835 2r8h:A (2.48) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104836 2r8h:A (2.48) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104837 2r8h:A (2.48) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104838 2r8h:A (2.48) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104839 2r8h:A (2.48) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104840 2r8h:A (2.48) BS06 DGT 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104841 2r8i:A (2.38) BS01 dna 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104842 2r8i:A (2.38) BS02 dna 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104843 2r8i:A (2.38) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104844 2r8i:A (2.38) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104845 2r8i:A (2.38) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104846 2r8i:A (2.38) BS06 DTP 2.7.7.7 GO:0000287 ... Q97W02 18563918
    104847 2r8j:A (3.1) BS01 dna 2.7.7.7 GO:0003684 ... Q04049 17991862
    104848 2r8j:A (3.1) BS02 dna 2.7.7.7 GO:0003684 ... Q04049 17991862
    104849 2r8j:A (3.1) BS03 CA 2.7.7.7 GO:0003684 ... Q04049 17991862
    104850 2r8j:A (3.1) BS04 CA 2.7.7.7 GO:0003684 ... Q04049 17991862
    104851 2r8j:A (3.1) BS05 DCP 2.7.7.7 GO:0003684 ... Q04049 17991862
    104852 2r8j:B (3.1) BS01 dna 2.7.7.7 GO:0003684 ... Q04049 17991862
    104853 2r8j:B (3.1) BS02 dna 2.7.7.7 GO:0003684 ... Q04049 17991862
    104854 2r8j:B (3.1) BS03 CA 2.7.7.7 GO:0003684 ... Q04049 17991862
    104855 2r8j:B (3.1) BS04 CA 2.7.7.7 GO:0003684 ... Q04049 17991862
    104856 2r8j:B (3.1) BS05 DCP 2.7.7.7 GO:0003684 ... Q04049 17991862
    104857 2r8k:A (3.3) BS01 dna 2.7.7.7 GO:0003684 ... Q04049 17991862
    104858 2r8k:A (3.3) BS02 dna 2.7.7.7 GO:0003684 ... Q04049 17991862
    104859 2r8k:A (3.3) BS03 CA 2.7.7.7 GO:0003684 ... Q04049 17991862
    104860 2r8k:A (3.3) BS04 CA 2.7.7.7 GO:0003684 ... Q04049 17991862
    104861 2r8k:A (3.3) BS05 DTP 2.7.7.7 GO:0003684 ... Q04049 17991862
    104862 2r8k:B (3.3) BS01 dna 2.7.7.7 GO:0003684 ... Q04049 17991862
    104863 2r8k:B (3.3) BS02 dna 2.7.7.7 GO:0003684 ... Q04049 17991862
    104864 2r8k:B (3.3) BS03 CA 2.7.7.7 GO:0003684 ... Q04049 17991862
    104865 2r8k:B (3.3) BS04 CA 2.7.7.7 GO:0003684 ... Q04049 17991862
    104866 2r8k:B (3.3) BS05 DTP 2.7.7.7 GO:0003684 ... Q04049 17991862
    104867 2r8o:A (1.47) BS01 CA 2.2.1.1 GO:0000287 ... P27302 17914867
    104868 2r8o:A (1.47) BS02 T5X 2.2.1.1 GO:0000287 ... P27302 17914867
    104869 2r8o:A (1.47) BS03 T5X 2.2.1.1 GO:0000287 ... P27302 17914867
    104870 2r8o:B (1.47) BS01 T5X 2.2.1.1 GO:0000287 ... P27302 17914867
    104871 2r8o:B (1.47) BS02 CA 2.2.1.1 GO:0000287 ... P27302 17914867
    104872 2r8o:B (1.47) BS03 T5X 2.2.1.1 GO:0000287 ... P27302 17914867
    104873 2r8p:A (1.65) BS01 CA 2.2.1.1 GO:0000287 ... P27302 17914867
    104874 2r8p:A (1.65) BS02 T6F 2.2.1.1 GO:0000287 ... P27302 17914867
    104875 2r8p:A (1.65) BS03 T6F 2.2.1.1 GO:0000287 ... P27302 17914867
    104876 2r8p:B (1.65) BS01 T6F 2.2.1.1 GO:0000287 ... P27302 17914867
    104877 2r8p:B (1.65) BS02 CA 2.2.1.1 GO:0000287 ... P27302 17914867
    104878 2r8p:B (1.65) BS03 T6F 2.2.1.1 GO:0000287 ... P27302 17914867
    104879 2r8q:A (1.5) BS01 ZN 3.1.4.- GO:0004114 ... Q6S996 17944832
    104880 2r8q:A (1.5) BS02 IBM 3.1.4.- GO:0004114 ... Q6S996 17944832 MOAD: ic50=580uM
    BindingDB: IC50=580000nM
    104881 2r8q:B (1.5) BS01 ZN 3.1.4.- GO:0004114 ... Q6S996 17944832
    104882 2r8s:H (1.95) BS01 rna N/A N/A N/A 18162543
    104883 2r8s:L (1.95) BS01 rna N/A N/A N/A 18162543
    104884 2r8t:A (2.3) BS01 FBP 3.1.3.11 GO:0005737 ... P0A9C9 N/A
    104885 2r8u:A (1.35) BS01 MOO ? GO:0000132 ... Q15691 N/A
    104886 2r8v:A (2.5) BS01 ACO 2.3.1.1 GO:0004042 ... Q5FAK7 18184660
    104887 2r8y:A (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104888 2r8y:B (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104889 2r8y:C (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104890 2r8y:D (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104891 2r8y:E (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104892 2r8y:F (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104893 2r8y:G (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104894 2r8y:H (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104895 2r8y:I (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104896 2r8y:J (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104897 2r8y:K (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104898 2r8y:L (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104899 2r8y:M (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104900 2r8y:N (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104901 2r8y:O (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104902 2r8y:P (1.85) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104903 2r8z:A (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104904 2r8z:B (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104905 2r8z:C (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104906 2r8z:D (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104907 2r8z:E (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104908 2r8z:F (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104909 2r8z:G (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104910 2r8z:H (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104911 2r8z:I (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104912 2r8z:J (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104913 2r8z:K (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104914 2r8z:L (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104915 2r8z:M (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104916 2r8z:N (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104917 2r8z:O (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104918 2r8z:P (2.1) BS01 CA 3.1.3.45 GO:0008781 ... P67653 19726684
    104919 2r92:A (3.8) BS01 rna 2.7.7.6 GO:0001172 ... P04050 18004386
    104920 2r92:A (3.8) BS02 ZN 2.7.7.6 GO:0001172 ... P04050 18004386
    104921 2r92:A (3.8) BS03 MG 2.7.7.6 GO:0001172 ... P04050 18004386
    104922 2r92:B (3.8) BS01 rna 2.7.7.6 GO:0001172 ... P08518 18004386
    104923 2r92:B (3.8) BS02 rna 2.7.7.6 GO:0001172 ... P08518 18004386
    104924 2r92:B (3.8) BS03 ZN 2.7.7.6 GO:0001172 ... P08518 18004386
    104925 2r92:C (3.8) BS01 ZN 2.7.7.6 GO:0000428 ... P16370 18004386
    104926 2r92:I (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P27999 18004386
    104927 2r92:I (3.8) BS02 ZN 2.7.7.6 GO:0001172 ... P27999 18004386
    104928 2r92:J (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P22139 18004386
    104929 2r92:L (3.8) BS01 ZN 2.7.7.6 GO:0001172 ... P40422 18004386
    104930 2r93:A (4.0) BS01 rna 2.7.7.6 GO:0001172 ... P04050 18004386
    104931 2r93:A (4.0) BS02 ZN 2.7.7.6 GO:0001172 ... P04050 18004386
    104932 2r93:A (4.0) BS03 MG 2.7.7.6 GO:0001172 ... P04050 18004386
    104933 2r93:B (4.0) BS01 rna 2.7.7.6 GO:0001172 ... P08518 18004386
    104934 2r93:B (4.0) BS02 ZN 2.7.7.6 GO:0001172 ... P08518 18004386
    104935 2r93:C (4.0) BS01 ZN 2.7.7.6 GO:0000428 ... P16370 18004386
    104936 2r93:J (4.0) BS01 ZN 2.7.7.6 GO:0001172 ... P22139 18004386
    104937 2r93:L (4.0) BS01 ZN 2.7.7.6 GO:0001172 ... P40422 18004386
    104938 2r94:A (2.2) BS01 PYR 4.1.2.14
    4.1.2.51    		 GO:0008675 ... Q704D1 18186475
    104939 2r94:B (2.2) BS01 PYR 4.1.2.14
    4.1.2.51    		 GO:0008675 ... Q704D1 18186475
    104940 2r94:C (2.2) BS01 PYR 4.1.2.14
    4.1.2.51    		 GO:0008675 ... Q704D1 18186475
    104941 2r94:D (2.2) BS01 PYR 4.1.2.14
    4.1.2.51    		 GO:0008675 ... Q704D1 18186475
    104942 2r96:A (2.6) BS01 FMN 1.6.5.2 GO:0003955 ... P0A8G6 19665595
    104943 2r96:C (2.6) BS01 FMN 1.6.5.2 GO:0003955 ... P0A8G6 19665595
    104944 2r97:A (2.0) BS01 FMN 1.6.5.2 GO:0003955 ... P0A8G6 19665595
    104945 2r97:A (2.0) BS02 FMN 1.6.5.2 GO:0003955 ... P0A8G6 19665595
    104946 2r97:C (2.0) BS01 FMN 1.6.5.2 GO:0003955 ... P0A8G6 19665595
    104947 2r97:C (2.0) BS02 FMN 1.6.5.2 GO:0003955 ... P0A8G6 19665595
    104948 2r98:A (2.4) BS01 ACO 2.3.1.1 GO:0004042 ... Q5FAK7 18184660
    104949 2r9b:A (2.8) BS01 peptide 3.4.23.39 GO:0004190 ... P46925 19271776
    104950 2r9b:B (2.8) BS01 peptide 3.4.23.39 GO:0004190 ... P46925 19271776
    104951 2r9c:A (1.8) BS01 CA 3.4.22.52 GO:0004198 ... P97571 18702462
    104952 2r9c:A (1.8) BS02 CA 3.4.22.52 GO:0004198 ... P97571 18702462
    104953 2r9c:A (1.8) BS03 GRD 3.4.22.52 GO:0004198 ... P97571 18702462
    104954 2r9e:A (1.95) BS01 SDX 2.3.3.16 GO:0005737 ... P21553 N/A
    104955 2r9e:A (1.95) BS02 SDX 2.3.3.16 GO:0005737 ... P21553 N/A
    104956 2r9e:B (1.95) BS01 SDX 2.3.3.16 GO:0005737 ... P21553 N/A
    104957 2r9e:B (1.95) BS02 SDX 2.3.3.16 GO:0005737 ... P21553 N/A
    104958 2r9e:C (1.95) BS01 SDX 2.3.3.16 GO:0005737 ... P21553 N/A
    104959 2r9e:C (1.95) BS02 SDX 2.3.3.16 GO:0005737 ... P21553 N/A
    104960 2r9e:D (1.95) BS01 SDX 2.3.3.16 GO:0005737 ... P21553 N/A
    104961 2r9e:D (1.95) BS02 SDX 2.3.3.16 GO:0005737 ... P21553 N/A
    104962 2r9f:A (1.6) BS01 CA 3.4.22.52 GO:0004198 ... P97571 18702462
    104963 2r9f:A (1.6) BS02 CA 3.4.22.52 GO:0004198 ... P97571 18702462
    104964 2r9f:A (1.6) BS03 K2Z 3.4.22.52 GO:0004198 ... P97571 18702462
    104965 2r9j:A (2.55) BS01 FE 3.4.21.- GO:0005576 ... P24627 N/A
    104966 2r9j:A (2.55) BS02 CO3 3.4.21.- GO:0005576 ... P24627 N/A
    104967 2r9j:A (2.55) BS03 NCA 3.4.21.- GO:0005576 ... P24627 N/A
    104968 2r9k:A (2.7) BS01 SGI 3.2.2.22 GO:0017148 ... P81446 17937929
    104969 2r9k:B (2.7) BS01 SGI 3.2.2.22 N/A P81446 17937929
    104970 2r9l:A (2.4) BS01 dna 6.5.1.1 N/A P9WNV3 17947582
    104971 2r9l:A (2.4) BS02 dna 6.5.1.1 N/A P9WNV3 17947582
    104972 2r9l:B (2.4) BS01 dna 6.5.1.1 N/A P9WNV3 17947582
    104973 2r9l:B (2.4) BS02 dna 6.5.1.1 N/A P9WNV3 17947582
    104974 2r9m:A (1.97) BS01 Y11 3.4.22.27 GO:0006508 ... P25774 N/A BindingDB: IC50=1.5nM
    104975 2r9m:B (1.97) BS01 Y11 3.4.22.27 GO:0006508 ... P25774 N/A BindingDB: IC50=1.5nM
    104976 2r9n:A (2.0) BS01 Y14 3.4.22.27 GO:0006508 ... P25774 N/A
    104977 2r9n:B (2.0) BS01 Y14 3.4.22.27 GO:0006508 ... P25774 N/A
    104978 2r9o:A (2.0) BS01 Y15 3.4.22.27 GO:0006508 ... P25774 N/A
    104979 2r9o:B (2.0) BS01 Y15 3.4.22.27 GO:0006508 ... P25774 N/A
    104980 2r9q:B (2.2) BS01 peptide ? GO:0008829 ... A9CKA1 N/A
    104981 2r9q:C (2.2) BS01 peptide ? GO:0008829 ... A9CKA1 N/A
    104982 2r9r:A (2.4) BS01 NAP 1.1.1.- GO:0005249 ... P62483 18004376
    104983 2r9r:B (2.4) BS01 PGW N/A GO:0005216 ... N/A 18004376
    104984 2r9r:B (2.4) BS02 PGW N/A GO:0005216 ... N/A 18004376
    104985 2r9r:B (2.4) BS03 PGW N/A GO:0005216 ... N/A 18004376
    104986 2r9r:B (2.4) BS04 PGW N/A GO:0005216 ... N/A 18004376
    104987 2r9r:G (2.4) BS01 NAP 1.1.1.- GO:0005249 ... P62483 18004376
    104988 2r9r:H (2.4) BS01 PGW N/A GO:0005216 ... N/A 18004376
    104989 2r9s:A (2.4) BS01 255 2.7.11.24 GO:0004672 ... P53779 17911023 MOAD: ic50=0.15uM
    BindingDB: IC50=150nM
    104990 2r9s:A (2.4) BS02 TFA 2.7.11.24 GO:0004672 ... P53779 17911023
    104991 2r9s:B (2.4) BS01 255 2.7.11.24 GO:0004672 ... P53779 17911023 MOAD: ic50=0.15uM
    BindingDB: IC50=150nM
    104992 2r9s:B (2.4) BS02 TFA 2.7.11.24 GO:0004672 ... P53779 17911023
    104993 2r9v:A (2.1) BS01 ATP 7.1.2.2 GO:0005524 ... Q9X1U7 N/A
    104994 2r9w:A (1.8) BS01 23C 3.5.2.6 GO:0008800 ... P00811 18333608 MOAD: Ki=8uM
    BindingDB: Ki=5000nM
    104995 2r9w:B (1.8) BS01 23C 3.5.2.6 GO:0008800 ... P00811 18333608 MOAD: Ki=8uM
    BindingDB: Ki=5000nM
    104996 2r9x:A (1.9) BS01 WH6 3.5.2.6 GO:0008800 ... P00811 18333608 MOAD: Ki=14uM
    104997 2r9x:B (1.9) BS01 WH6 3.5.2.6 GO:0008800 ... P00811 18333608 MOAD: Ki=14uM
    104998 2r9z:A (2.1) BS01 FAD 1.8.1.16 GO:0004362 ... D0VWY5 17977556
    104999 2r9z:B (2.1) BS01 FAD 1.8.1.16 GO:0004362 ... D0VWY5 17977556
    105000 2ra0:A (2.3) BS01 JNJ 3.4.21.6 GO:0004252 ... P00742 18159923 MOAD: Ki=15.9nM
    BindingDB: Ki=15.9nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).