SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1050201 9qgf:B (1.444) BS02 A1I6V N/A GO:0005829 ... A0ACD6B956 40305164
    1050202 9qgg:A (2.58) BS01 peptide N/A N/A A0A0B4KG50 41350950
    1050203 9qgg:B (2.58) BS01 AMP N/A GO:0008641 ... Q8T0L3 41350950
    1050204 9qgi:B (3.16) BS01 AMP N/A GO:0008641 ... Q8T0L3 41350950
    1050205 9qgj:A (2.2) BS01 A1I6R N/A N/A P37231 N/A
    1050206 9qgj:B (2.2) BS01 A1I6R N/A N/A P37231 N/A
    1050207 9qgk:F (2.97) BS01 peptide N/A N/A P68139 N/A
    1050208 9qgk:F (2.97) BS02 peptide N/A N/A P68139 N/A
    1050209 9qgk:F (2.97) BS03 ADP N/A N/A P68139 N/A
    1050210 9qgk:G (2.97) BS01 peptide N/A N/A P68139 N/A
    1050211 9qgk:G (2.97) BS02 peptide N/A N/A P68139 N/A
    1050212 9qgk:G (2.97) BS03 peptide N/A N/A P68139 N/A
    1050213 9qgk:G (2.97) BS04 ADP N/A N/A P68139 N/A
    1050214 9qgk:H (2.97) BS01 peptide N/A N/A P68139 N/A
    1050215 9qgk:H (2.97) BS02 peptide N/A N/A P68139 N/A
    1050216 9qgk:H (2.97) BS03 peptide N/A N/A P68139 N/A
    1050217 9qgk:H (2.97) BS04 peptide N/A N/A P68139 N/A
    1050218 9qgk:H (2.97) BS05 ADP N/A N/A P68139 N/A
    1050219 9qgk:I (2.97) BS01 peptide N/A N/A P68139 N/A
    1050220 9qgk:I (2.97) BS02 ADP N/A N/A P68139 N/A
    1050221 9qgk:J (2.97) BS01 peptide N/A N/A P68139 N/A
    1050222 9qgk:J (2.97) BS02 peptide N/A N/A P68139 N/A
    1050223 9qgk:J (2.97) BS03 peptide N/A N/A P68139 N/A
    1050224 9qgk:J (2.97) BS04 peptide N/A N/A P68139 N/A
    1050225 9qgk:J (2.97) BS05 ADP N/A N/A P68139 N/A
    1050226 9qgm:8A (2.82) BS01 peptide N/A N/A Q7N647 41125615
    1050227 9qgm:8B (2.82) BS01 peptide N/A N/A Q7N647 41125615
    1050228 9qgo:c (6.0) BS01 peptide N/A N/A A0A6L9JN06 41125615
    1050229 9qgo:c (6.0) BS02 peptide N/A N/A A0A6L9JN06 41125615
    1050230 9qgo:c (6.0) BS03 peptide N/A N/A A0A6L9JN06 41125615
    1050231 9qgo:c (6.0) BS04 peptide N/A N/A A0A6L9JN06 41125615
    1050232 9qgr:B (3.1) BS01 AMP N/A GO:0008641 ... Q8T0L3 41350950
    1050233 9qgu:A (3.69) BS01 AV0 N/A N/A N/A 41839883
    1050234 9qgu:A (3.69) BS02 AV0 N/A N/A N/A 41839883
    1050235 9qgu:B (3.69) BS01 AV0 N/A N/A N/A 41839883
    1050236 9qgu:B (3.69) BS02 AV0 N/A N/A N/A 41839883
    1050237 9qgu:C (3.69) BS01 ADP N/A N/A N/A 41839883
    1050238 9qgu:D (3.69) BS01 ADP N/A N/A N/A 41839883
    1050239 9qgv:A (1.55) BS01 dna N/A N/A N/A N/A
    1050240 9qgv:A (1.55) BS02 dna N/A N/A N/A N/A
    1050241 9qgv:A (1.55) BS03 ZN N/A N/A N/A N/A
    1050242 9qgv:A (1.55) BS04 ZN N/A N/A N/A N/A
    1050243 9qgw:B (3.62) BS01 IHP N/A GO:0004839 ... A0AVT1 41350950
    1050244 9qgw:B (3.62) BS02 ATP N/A GO:0004839 ... A0AVT1 41350950
    1050245 9qgx:A (2.35) BS01 dna N/A N/A N/A N/A
    1050246 9qgx:A (2.35) BS02 ZN N/A N/A N/A N/A
    1050247 9qgx:A (2.35) BS03 ZN N/A N/A N/A N/A
    1050248 9qgy:A (2.48) BS01 Z41 N/A N/A P02930 N/A
    1050249 9qgy:B (2.48) BS01 Z41 N/A N/A P02930 N/A
    1050250 9qgy:C (2.48) BS01 Z41 N/A N/A P02930 N/A
    1050251 9qgz:A (2.84) BS01 FAD N/A N/A A0A975LBX7 41231970
    1050252 9qgz:A (2.84) BS02 FE N/A N/A A0A975LBX7 41231970
    1050253 9qgz:B (2.84) BS01 FAD N/A N/A A0A975LBX7 41231970
    1050254 9qgz:B (2.84) BS02 FE N/A N/A A0A975LBX7 41231970
    1050255 9qgz:C (2.84) BS01 FAD N/A N/A A0A975LBX7 41231970
    1050256 9qgz:C (2.84) BS02 FE N/A N/A A0A975LBX7 41231970
    1050257 9qgz:D (2.84) BS01 FAD N/A N/A A0A975LBX7 41231970
    1050258 9qgz:D (2.84) BS02 FE N/A N/A A0A975LBX7 41231970
    1050259 9qgz:E (2.84) BS01 FAD N/A N/A A0A975LBX7 41231970
    1050260 9qgz:E (2.84) BS02 FE N/A N/A A0A975LBX7 41231970
    1050261 9qgz:F (2.84) BS01 FAD N/A N/A A0A975LBX7 41231970
    1050262 9qgz:F (2.84) BS02 FE N/A N/A A0A975LBX7 41231970
    1050263 9qgz:G (2.84) BS01 FAD N/A N/A A0A975LBX7 41231970
    1050264 9qgz:G (2.84) BS02 FE N/A N/A A0A975LBX7 41231970
    1050265 9qgz:H (2.84) BS01 FAD N/A N/A A0A975LBX7 41231970
    1050266 9qgz:H (2.84) BS02 FE N/A N/A A0A975LBX7 41231970
    1050267 9qh1:C (3.44) BS01 ATP N/A N/A N/A 41839883
    1050268 9qh1:C (3.44) BS02 ATP N/A N/A N/A 41839883
    1050269 9qh1:D (3.44) BS01 ATP N/A N/A N/A 41839883
    1050270 9qh1:D (3.44) BS02 ATP N/A N/A N/A 41839883
    1050271 9qh3:A (2.4) BS01 peptide N/A GO:0003723 ... Q9HV59 41036625
    1050272 9qh3:A (2.4) BS02 A N/A GO:0003723 ... Q9HV59 41036625
    1050273 9qh4:A (3.7) BS01 ATP N/A N/A N/A N/A
    1050274 9qh4:B (3.7) BS01 ATP N/A N/A N/A N/A
    1050275 9qh4:C (3.7) BS01 ATP N/A N/A N/A N/A
    1050276 9qh4:D (3.7) BS01 ADP N/A N/A N/A N/A
    1050277 9qh4:E (3.7) BS01 ADP N/A N/A N/A N/A
    1050278 9qh4:F (3.7) BS01 ADP N/A N/A N/A N/A
    1050279 9qh5:A (3.09) BS01 peptide N/A N/A Q9NR09 41350950
    1050280 9qh5:B (3.09) BS01 IHP N/A GO:0004839 ... A0AVT1 41350950
    1050281 9qh5:B (3.09) BS02 AMP N/A GO:0004839 ... A0AVT1 41350950
    1050282 9qh6:A (3.2) BS01 ATP N/A N/A N/A N/A
    1050283 9qh6:B (3.2) BS01 ATP N/A N/A N/A N/A
    1050284 9qh6:C (3.2) BS01 ATP N/A N/A N/A N/A
    1050285 9qh6:D (3.2) BS01 ADP N/A N/A N/A N/A
    1050286 9qh6:E (3.2) BS01 ADP N/A N/A N/A N/A
    1050287 9qh7:A (2.9) BS01 ATP N/A N/A N/A N/A
    1050288 9qh7:B (2.9) BS01 ATP N/A N/A N/A N/A
    1050289 9qh7:C (2.9) BS01 ATP N/A N/A N/A N/A
    1050290 9qh7:D (2.9) BS01 ATP N/A N/A N/A N/A
    1050291 9qh7:E (2.9) BS01 ATP N/A N/A N/A N/A
    1050292 9qh8:A (3.8) BS01 ATP N/A N/A N/A N/A
    1050293 9qh8:B (3.8) BS01 ATP N/A N/A N/A N/A
    1050294 9qh8:C (3.8) BS01 ATP N/A N/A N/A N/A
    1050295 9qh8:D (3.8) BS01 ADP N/A N/A N/A N/A
    1050296 9qh8:E (3.8) BS01 ADP N/A N/A N/A N/A
    1050297 9qh9:A (3.0) BS01 ATP N/A N/A N/A N/A
    1050298 9qh9:B (3.0) BS01 ATP N/A N/A N/A N/A
    1050299 9qh9:C (3.0) BS01 ATP N/A N/A N/A N/A
    1050300 9qh9:D (3.0) BS01 ATP N/A N/A N/A N/A
    1050301 9qhb:A (1.97) BS01 CA N/A GO:0006396 ... N/A 41077847
    1050302 9qhd:A (3.3) BS01 ATP N/A N/A N/A N/A
    1050303 9qhd:B (3.3) BS01 ATP N/A N/A N/A N/A
    1050304 9qhd:C (3.3) BS01 ATP N/A N/A N/A N/A
    1050305 9qhd:D (3.3) BS01 ADP N/A N/A N/A N/A
    1050306 9qhd:E (3.3) BS01 ADP N/A N/A N/A N/A
    1050307 9qhe:A (3.8) BS01 ATP N/A N/A N/A N/A
    1050308 9qhe:B (3.8) BS01 ATP N/A N/A N/A N/A
    1050309 9qhe:C (3.8) BS01 ATP N/A N/A N/A N/A
    1050310 9qhe:D (3.8) BS01 ADP N/A N/A N/A N/A
    1050311 9qhe:E (3.8) BS01 ADP N/A N/A N/A N/A
    1050312 9qhf:A (3.9) BS01 ATP N/A N/A N/A N/A
    1050313 9qhf:B (3.9) BS01 ATP N/A N/A N/A N/A
    1050314 9qhf:C (3.9) BS01 ATP N/A N/A N/A N/A
    1050315 9qhf:D (3.9) BS01 ADP N/A N/A N/A N/A
    1050316 9qhf:E (3.9) BS01 ADP N/A N/A N/A N/A
    1050317 9qhg:A (3.9) BS01 ATP N/A N/A N/A N/A
    1050318 9qhg:B (3.9) BS01 ATP N/A N/A N/A N/A
    1050319 9qhg:C (3.9) BS01 ATP N/A N/A N/A N/A
    1050320 9qhg:D (3.9) BS01 ADP N/A N/A N/A N/A
    1050321 9qhg:E (3.9) BS01 ADP N/A N/A N/A N/A
    1050322 9qhi:B (4.27) BS01 IHP N/A GO:0004839 ... A0AVT1 41350950
    1050323 9qhi:B (4.27) BS02 AMP N/A GO:0004839 ... A0AVT1 41350950
    1050324 9qhj:C (3.4) BS01 ATP N/A N/A N/A 41839883
    1050325 9qhj:C (3.4) BS02 ATP N/A N/A N/A 41839883
    1050326 9qhj:D (3.4) BS01 ATP N/A N/A N/A 41839883
    1050327 9qhj:D (3.4) BS02 ATP N/A N/A N/A 41839883
    1050328 9qhl:A (1.93) BS01 peptide N/A N/A N/A N/A
    1050329 9qhl:A (1.93) BS02 peptide N/A N/A N/A N/A
    1050330 9qhl:E (1.93) BS01 peptide N/A N/A N/A N/A
    1050331 9qhl:E (1.93) BS02 peptide N/A N/A N/A N/A
    1050332 9qhl:G (1.93) BS01 peptide N/A N/A N/A N/A
    1050333 9qhl:G (1.93) BS02 peptide N/A N/A N/A N/A
    1050334 9qhm:A (2.61) BS01 A1D6M N/A N/A Q69ZE8 N/A
    1050335 9qhm:A (2.61) BS02 YUV N/A N/A Q69ZE8 N/A
    1050336 9qhm:A (2.61) BS03 YUV N/A N/A Q69ZE8 N/A
    1050337 9qhm:B (2.61) BS01 YUV N/A N/A Q69ZE8 N/A
    1050338 9qhm:B (2.61) BS02 YUV N/A N/A Q69ZE8 N/A
    1050339 9qhm:B (2.61) BS03 A1D6M N/A N/A Q69ZE8 N/A
    1050340 9qhm:B (2.61) BS04 YUV N/A N/A Q69ZE8 N/A
    1050341 9qhm:C (2.61) BS01 YUV N/A N/A Q69ZE8 N/A
    1050342 9qhm:C (2.61) BS02 YUV N/A N/A Q69ZE8 N/A
    1050343 9qhm:C (2.61) BS03 YUV N/A N/A Q69ZE8 N/A
    1050344 9qhm:C (2.61) BS04 A1D6M N/A N/A Q69ZE8 N/A
    1050345 9qhm:C (2.61) BS05 YUV N/A N/A Q69ZE8 N/A
    1050346 9qhm:D (2.61) BS01 YUV N/A N/A Q69ZE8 N/A
    1050347 9qhm:D (2.61) BS02 YUV N/A N/A Q69ZE8 N/A
    1050348 9qhm:D (2.61) BS03 A1D6M N/A N/A Q69ZE8 N/A
    1050349 9qhn:A (3.2) BS01 CLR N/A N/A J9SQF3 N/A
    1050350 9qhn:B (3.2) BS01 CLR N/A N/A J9SQF3 N/A
    1050351 9qhn:C (3.2) BS01 CLR N/A N/A J9SQF3 N/A
    1050352 9qhn:D (3.2) BS01 CLR N/A N/A J9SQF3 N/A
    1050353 9qho:A (3.28) BS01 9Z9 N/A N/A Q69ZE8 N/A
    1050354 9qho:A (3.28) BS02 A1AIA N/A N/A Q69ZE8 N/A
    1050355 9qho:A (3.28) BS03 9Z9 N/A N/A Q69ZE8 N/A
    1050356 9qho:B (3.28) BS01 9Z9 N/A N/A Q69ZE8 N/A
    1050357 9qho:B (3.28) BS02 A1AIA N/A N/A Q69ZE8 N/A
    1050358 9qho:C (3.28) BS01 9Z9 N/A N/A Q69ZE8 N/A
    1050359 9qho:C (3.28) BS02 A1AIA N/A N/A Q69ZE8 N/A
    1050360 9qho:C (3.28) BS03 9Z9 N/A N/A Q69ZE8 N/A
    1050361 9qho:D (3.28) BS01 9Z9 N/A N/A Q69ZE8 N/A
    1050362 9qho:D (3.28) BS02 A1AIA N/A N/A Q69ZE8 N/A
    1050363 9qhp:A (2.35) BS01 A1JBK N/A N/A Q69ZE8 N/A
    1050364 9qhp:A (2.35) BS02 YUV N/A N/A Q69ZE8 N/A
    1050365 9qhp:A (2.35) BS03 YUV N/A N/A Q69ZE8 N/A
    1050366 9qhp:A (2.35) BS04 YUV N/A N/A Q69ZE8 N/A
    1050367 9qhp:A (2.35) BS05 YUV N/A N/A Q69ZE8 N/A
    1050368 9qhp:B (2.35) BS01 YUV N/A N/A Q69ZE8 N/A
    1050369 9qhp:B (2.35) BS02 YUV N/A N/A Q69ZE8 N/A
    1050370 9qhp:B (2.35) BS03 YUV N/A N/A Q69ZE8 N/A
    1050371 9qhp:B (2.35) BS04 A1JBK N/A N/A Q69ZE8 N/A
    1050372 9qhp:B (2.35) BS05 YUV N/A N/A Q69ZE8 N/A
    1050373 9qhp:C (2.35) BS01 YUV N/A N/A Q69ZE8 N/A
    1050374 9qhp:C (2.35) BS02 YUV N/A N/A Q69ZE8 N/A
    1050375 9qhp:C (2.35) BS03 YUV N/A N/A Q69ZE8 N/A
    1050376 9qhp:C (2.35) BS04 A1JBK N/A N/A Q69ZE8 N/A
    1050377 9qhp:C (2.35) BS05 YUV N/A N/A Q69ZE8 N/A
    1050378 9qhp:D (2.35) BS01 YUV N/A N/A Q69ZE8 N/A
    1050379 9qhp:D (2.35) BS02 YUV N/A N/A Q69ZE8 N/A
    1050380 9qhp:D (2.35) BS03 YUV N/A N/A Q69ZE8 N/A
    1050381 9qhp:D (2.35) BS04 A1JBK N/A N/A Q69ZE8 N/A
    1050382 9qhp:D (2.35) BS05 YUV N/A N/A Q69ZE8 N/A
    1050383 9qhq:A (3.07) BS01 A1I8P N/A N/A Q69ZE8 N/A
    1050384 9qhq:A (3.07) BS02 A8W N/A N/A Q69ZE8 N/A
    1050385 9qhq:A (3.07) BS03 CLR N/A N/A Q69ZE8 N/A
    1050386 9qhq:B (3.07) BS01 A8W N/A N/A Q69ZE8 N/A
    1050387 9qhq:B (3.07) BS02 A1I8P N/A N/A Q69ZE8 N/A
    1050388 9qhq:C (3.07) BS01 A1I8P N/A N/A Q69ZE8 N/A
    1050389 9qhq:C (3.07) BS02 A8W N/A N/A Q69ZE8 N/A
    1050390 9qhq:D (3.07) BS01 A8W N/A N/A Q69ZE8 N/A
    1050391 9qhq:D (3.07) BS02 A1I8P N/A N/A Q69ZE8 N/A
    1050392 9qhs:A (3.8) BS01 dna N/A N/A N/A N/A
    1050393 9qhs:A (3.8) BS02 dna N/A N/A N/A N/A
    1050394 9qhs:A (3.8) BS03 MG N/A N/A N/A N/A
    1050395 9qhs:A (3.8) BS04 DCT N/A N/A N/A N/A
    1050396 9qhv:C (4.04) BS01 ADP N/A N/A N/A 41839883
    1050397 9qhv:D (4.04) BS01 ADP N/A N/A N/A 41839883
    1050398 9qhw:C (3.3) BS01 MG N/A N/A N/A 41839883
    1050399 9qhw:C (3.3) BS02 ATP N/A N/A N/A 41839883
    1050400 9qhw:C (3.3) BS03 ATP N/A N/A N/A 41839883

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).