SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1050601 9qky:B (3.86) BS01 dna N/A GO:0003700 ... P70257 41261119
    1050602 9qky:B (3.86) BS02 dna N/A GO:0003700 ... P70257 41261119
    1050603 9qky:B (3.86) BS03 ZN N/A GO:0003700 ... P70257 41261119
    1050604 9qky:E (3.86) BS01 dna N/A GO:0003700 ... P70257 41261119
    1050605 9qky:E (3.86) BS02 dna N/A GO:0003700 ... P70257 41261119
    1050606 9qky:E (3.86) BS03 ZN N/A GO:0003700 ... P70257 41261119
    1050607 9qky:F (3.86) BS01 dna N/A GO:0003700 ... P70257 41261119
    1050608 9qky:F (3.86) BS02 dna N/A GO:0003700 ... P70257 41261119
    1050609 9qky:F (3.86) BS03 ZN N/A GO:0003700 ... P70257 41261119
    1050610 9qky:I (3.86) BS01 dna N/A GO:0003700 ... P70257 41261119
    1050611 9qky:I (3.86) BS02 dna N/A GO:0003700 ... P70257 41261119
    1050612 9qky:I (3.86) BS03 ZN N/A GO:0003700 ... P70257 41261119
    1050613 9qky:J (3.86) BS01 dna N/A GO:0003700 ... P70257 41261119
    1050614 9qky:J (3.86) BS02 dna N/A GO:0003700 ... P70257 41261119
    1050615 9qky:J (3.86) BS03 ZN N/A GO:0003700 ... P70257 41261119
    1050616 9qky:M (3.86) BS01 dna N/A GO:0003700 ... P70257 41261119
    1050617 9qky:M (3.86) BS02 dna N/A GO:0003700 ... P70257 41261119
    1050618 9qky:M (3.86) BS03 ZN N/A GO:0003700 ... P70257 41261119
    1050619 9qky:N (3.86) BS01 dna N/A GO:0003700 ... P70257 41261119
    1050620 9qky:N (3.86) BS02 dna N/A GO:0003700 ... P70257 41261119
    1050621 9qky:N (3.86) BS03 ZN N/A GO:0003700 ... P70257 41261119
    1050622 9qkz:B (2.3) BS01 ANP N/A N/A N/A N/A
    1050623 9qkz:B (2.3) BS02 MG N/A N/A N/A N/A
    1050624 9ql1:B (2.4) BS01 NK3 N/A N/A N/A N/A
    1050625 9qle:D (2.8) BS01 PSF N/A GO:0001778 ... Q9NZM1 40437073
    1050626 9qle:D (2.8) BS02 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050627 9qle:D (2.8) BS03 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050628 9qle:D (2.8) BS04 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050629 9qle:D (2.8) BS05 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050630 9qle:D (2.8) BS06 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050631 9qle:D (2.8) BS07 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050632 9qle:D (2.8) BS08 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050633 9qle:D (2.8) BS09 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050634 9qle:D (2.8) BS10 PSF N/A GO:0001778 ... Q9NZM1 40437073
    1050635 9qle:D (2.8) BS11 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050636 9qle:D (2.8) BS12 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050637 9qlf:D (2.65) BS01 PSF N/A GO:0001778 ... Q9NZM1 40437073
    1050638 9qlf:D (2.65) BS02 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050639 9qlf:D (2.65) BS03 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050640 9qlf:D (2.65) BS04 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050641 9qlf:D (2.65) BS05 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050642 9qlf:D (2.65) BS06 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050643 9qlf:D (2.65) BS07 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050644 9qlf:D (2.65) BS08 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050645 9qlf:D (2.65) BS09 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050646 9qlf:D (2.65) BS10 PSF N/A GO:0001778 ... Q9NZM1 40437073
    1050647 9qlf:D (2.65) BS11 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050648 9qlf:D (2.65) BS12 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050649 9qlm:A (-1.00) BS01 peptide N/A N/A Q5HZG4 40637225
    1050650 9qlm:A (-1.00) BS02 ZN N/A N/A Q5HZG4 40637225
    1050651 9qlm:A (-1.00) BS03 ZN N/A N/A Q5HZG4 40637225
    1050652 9qlm:A (-1.00) BS04 SRO N/A N/A Q5HZG4 40637225
    1050653 9qln:E (3.2) BS01 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050654 9qln:E (3.2) BS02 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050655 9qln:E (3.2) BS03 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050656 9qln:E (3.2) BS04 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050657 9qln:E (3.2) BS05 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050658 9qln:E (3.2) BS06 CA N/A GO:0001778 ... Q9NZM1 40437073
    1050659 9qlo:CR (2.47) BS01 rna N/A GO:0002184 ... P62495 41577716
    1050660 9qlo:CR (2.47) BS02 rna N/A GO:0002184 ... P62495 41577716
    1050661 9qlo:CR (2.47) BS03 rna N/A GO:0002184 ... P62495 41577716
    1050662 9qlo:CR (2.47) BS04 rna N/A GO:0002184 ... P62495 41577716
    1050663 9qlo:CZ (2.47) BS01 rna N/A GO:0000139 ... P84077 41577716
    1050664 9qlo:CZ (2.47) BS02 G3D N/A GO:0000139 ... P84077 41577716
    1050665 9qlo:LA (2.47) BS01 rna N/A GO:0002181 ... P62917 41577716
    1050666 9qlo:LA (2.47) BS02 rna N/A GO:0002181 ... P62917 41577716
    1050667 9qlo:LA (2.47) BS03 MG N/A GO:0002181 ... P62917 41577716
    1050668 9qlo:LB (2.47) BS01 rna N/A GO:0002181 ... P39023 41577716
    1050669 9qlo:LC (2.47) BS01 rna N/A GO:0002181 ... P36578 41577716
    1050670 9qlo:LC (2.47) BS02 rna N/A GO:0002181 ... P36578 41577716
    1050671 9qlo:LD (2.47) BS01 rna N/A GO:0000027 ... P46777 41577716
    1050672 9qlo:LD (2.47) BS02 rna N/A GO:0000027 ... P46777 41577716
    1050673 9qlo:LE (2.47) BS01 rna N/A GO:0002181 ... Q02878 41577716
    1050674 9qlo:LF (2.47) BS01 rna N/A GO:0000463 ... P18124 41577716
    1050675 9qlo:LF (2.47) BS02 rna N/A GO:0000463 ... P18124 41577716
    1050676 9qlo:LG (2.47) BS01 rna N/A GO:0000470 ... P62424 41577716
    1050677 9qlo:LG (2.47) BS02 rna N/A GO:0000470 ... P62424 41577716
    1050678 9qlo:LH (2.47) BS01 rna N/A GO:0002181 ... P32969 41577716
    1050679 9qlo:LI (2.47) BS01 rna N/A GO:0000027 ... Q96L21 41577716
    1050680 9qlo:LI (2.47) BS02 rna N/A GO:0000027 ... Q96L21 41577716
    1050681 9qlo:LJ (2.47) BS01 rna N/A GO:0000027 ... P62913 41577716
    1050682 9qlo:LJ (2.47) BS02 rna N/A GO:0000027 ... P62913 41577716
    1050683 9qlo:LJ (2.47) BS03 rna N/A GO:0000027 ... P62913 41577716
    1050684 9qlo:LL (2.47) BS01 rna N/A GO:0002181 ... P26373 41577716
    1050685 9qlo:LL (2.47) BS02 rna N/A GO:0002181 ... P26373 41577716
    1050686 9qlo:LM (2.47) BS01 rna N/A GO:0002181 ... P50914 41577716
    1050687 9qlo:LN (2.47) BS01 rna N/A GO:0002181 ... P61313 41577716
    1050688 9qlo:LN (2.47) BS02 rna N/A GO:0002181 ... P61313 41577716
    1050689 9qlo:LO (2.47) BS01 rna N/A GO:0002181 ... P40429 41577716
    1050690 9qlo:LP (2.47) BS01 rna N/A GO:0002181 ... P18621 41577716
    1050691 9qlo:LP (2.47) BS02 rna N/A GO:0002181 ... P18621 41577716
    1050692 9qlo:LQ (2.47) BS01 rna N/A GO:0002181 ... Q07020 41577716
    1050693 9qlo:LR (2.47) BS01 rna N/A GO:0002181 ... P84098 41577716
    1050694 9qlo:LR (2.47) BS02 rna N/A GO:0002181 ... P84098 41577716
    1050695 9qlo:LS (2.47) BS01 rna N/A GO:0002181 ... Q02543 41577716
    1050696 9qlo:LS (2.47) BS02 rna N/A GO:0002181 ... Q02543 41577716
    1050697 9qlo:LT (2.47) BS01 rna N/A GO:0001650 ... P46778 41577716
    1050698 9qlo:LT (2.47) BS02 rna N/A GO:0001650 ... P46778 41577716
    1050699 9qlo:LU (2.47) BS01 rna N/A GO:0002181 ... P35268 41577716
    1050700 9qlo:LV (2.47) BS01 rna N/A GO:0000122 ... P62829 41577716
    1050701 9qlo:LW (2.47) BS01 rna N/A GO:0002181 ... P83731 41577716
    1050702 9qlo:LX (2.47) BS01 rna N/A GO:0002181 ... P62750 41577716
    1050703 9qlo:LX (2.47) BS02 rna N/A GO:0002181 ... P62750 41577716
    1050704 9qlo:LY (2.47) BS01 rna N/A GO:0002181 ... P61254 41577716
    1050705 9qlo:LY (2.47) BS02 rna N/A GO:0002181 ... P61254 41577716
    1050706 9qlo:LZ (2.47) BS01 rna N/A GO:0002181 ... P61353 41577716
    1050707 9qlo:La (2.47) BS01 rna N/A GO:0002181 ... P46776 41577716
    1050708 9qlo:Lb (2.47) BS01 rna N/A GO:0002181 ... P47914 41577716
    1050709 9qlo:Lc (2.47) BS01 rna N/A GO:0002181 ... P62888 41577716
    1050710 9qlo:Ld (2.47) BS01 rna N/A GO:0002181 ... P62899 41577716
    1050711 9qlo:Le (2.47) BS01 rna N/A GO:0002181 ... P62910 41577716
    1050712 9qlo:Lf (2.47) BS01 rna N/A GO:0002181 ... P18077 41577716
    1050713 9qlo:Lg (2.47) BS01 rna N/A GO:0002181 ... P49207 41577716
    1050714 9qlo:Lg (2.47) BS02 ZN N/A GO:0002181 ... P49207 41577716
    1050715 9qlo:Lh (2.47) BS01 rna N/A GO:0000463 ... P42766 41577716
    1050716 9qlo:Lh (2.47) BS02 rna N/A GO:0000463 ... P42766 41577716
    1050717 9qlo:Li (2.47) BS01 rna N/A GO:0002181 ... Q9Y3U8 41577716
    1050718 9qlo:Lj (2.47) BS01 rna N/A GO:0000448 ... P61927 41577716
    1050719 9qlo:Lj (2.47) BS02 rna N/A GO:0000448 ... P61927 41577716
    1050720 9qlo:Lj (2.47) BS03 ZN N/A GO:0000448 ... P61927 41577716
    1050721 9qlo:Lk (2.47) BS01 rna N/A GO:0002181 ... P63173 41577716
    1050722 9qlo:Ll (2.47) BS01 rna N/A GO:0002181 ... P62891 41577716
    1050723 9qlo:Ll (2.47) BS02 rna N/A GO:0002181 ... P62891 41577716
    1050724 9qlo:Lm (2.47) BS01 rna N/A GO:0002181 ... P62987 41577716
    1050725 9qlo:Lm (2.47) BS02 ZN N/A GO:0002181 ... P62987 41577716
    1050726 9qlo:Lo (2.47) BS01 rna N/A GO:0002181 ... P83881 41577716
    1050727 9qlo:Lo (2.47) BS02 rna N/A GO:0002181 ... P83881 41577716
    1050728 9qlo:Lo (2.47) BS03 ZN N/A GO:0002181 ... P83881 41577716
    1050729 9qlo:Lp (2.47) BS01 rna N/A GO:0002181 ... P61513 41577716
    1050730 9qlo:Lp (2.47) BS02 ZN N/A GO:0002181 ... P61513 41577716
    1050731 9qlo:Lr (2.47) BS01 rna N/A GO:0002181 ... P46779 41577716
    1050732 9qlo:Ls (2.47) BS01 rna N/A GO:0002181 ... P05388 41577716
    1050733 9qlo:Lt (2.47) BS01 rna N/A GO:0002181 ... P30050 41577716
    1050734 9qlo:NA (2.47) BS01 rna N/A GO:0000122 ... Q13765 41577716
    1050735 9qlo:NB (2.47) BS01 rna N/A N/A P20290 41577716
    1050736 9qlo:SA (2.47) BS01 rna N/A GO:0000028 ... P08865 41577716
    1050737 9qlo:SB (2.47) BS01 rna N/A GO:0002181 ... P61247 41577716
    1050738 9qlo:SC (2.47) BS01 rna N/A GO:0002181 ... P15880 41577716
    1050739 9qlo:SD (2.47) BS01 rna N/A GO:0001228 ... P23396 41577716
    1050740 9qlo:SE (2.47) BS01 rna N/A GO:0002181 ... P62701 41577716
    1050741 9qlo:SF (2.47) BS01 rna N/A GO:0002181 ... P46782 41577716
    1050742 9qlo:SG (2.47) BS01 rna N/A GO:0002181 ... P62753 41577716
    1050743 9qlo:SH (2.47) BS01 rna N/A GO:0002181 ... P62081 41577716
    1050744 9qlo:SI (2.47) BS01 rna N/A GO:0002181 ... P62241 41577716
    1050745 9qlo:SI (2.47) BS02 rna N/A GO:0002181 ... P62241 41577716
    1050746 9qlo:SJ (2.47) BS01 rna N/A GO:0002181 ... P46781 41577716
    1050747 9qlo:SK (2.47) BS01 rna N/A GO:0002181 ... P46783 41577716
    1050748 9qlo:SL (2.47) BS01 rna N/A GO:0002181 ... P62280 41577716
    1050749 9qlo:SM (2.47) BS01 rna N/A GO:0002181 ... P25398 41577716
    1050750 9qlo:SN (2.47) BS01 rna N/A GO:0000462 ... P62277 41577716
    1050751 9qlo:SO (2.47) BS01 rna N/A GO:0000028 ... P62263 41577716
    1050752 9qlo:SP (2.47) BS01 rna N/A GO:0000056 ... P62841 41577716
    1050753 9qlo:SQ (2.47) BS01 rna N/A GO:0000462 ... P62249 41577716
    1050754 9qlo:SR (2.47) BS01 rna N/A GO:0002181 ... P08708 41577716
    1050755 9qlo:SS (2.47) BS01 rna N/A GO:0002181 ... P62269 41577716
    1050756 9qlo:ST (2.47) BS01 rna N/A GO:0000028 ... P39019 41577716
    1050757 9qlo:SU (2.47) BS01 rna N/A GO:0002181 ... P60866 41577716
    1050758 9qlo:SW (2.47) BS01 rna N/A GO:0002181 ... P62244 41577716
    1050759 9qlo:SX (2.47) BS01 rna N/A GO:0002181 ... P62266 41577716
    1050760 9qlo:SY (2.47) BS01 rna N/A GO:0002181 ... P62847 41577716
    1050761 9qlo:SZ (2.47) BS01 rna N/A GO:0002181 ... P62851 41577716
    1050762 9qlo:Sa (2.47) BS01 rna N/A GO:0002181 ... P62854 41577716
    1050763 9qlo:Sa (2.47) BS02 ZN N/A GO:0002181 ... P62854 41577716
    1050764 9qlo:Sb (2.47) BS01 rna N/A GO:0002181 ... P42677 41577716
    1050765 9qlo:Sc (2.47) BS01 rna N/A GO:0000028 ... P62857 41577716
    1050766 9qlo:Sd (2.47) BS01 rna N/A GO:0002181 ... P62273 41577716
    1050767 9qlo:Sd (2.47) BS02 ZN N/A GO:0002181 ... P62273 41577716
    1050768 9qlo:Se (2.47) BS01 rna N/A GO:0002181 ... P62861 41577716
    1050769 9qlo:Sf (2.47) BS01 rna N/A GO:0002181 ... P62979 41577716
    1050770 9qlo:Sg (2.47) BS01 rna N/A GO:0001891 ... P63244 41577716
    1050771 9qlp:CR (2.75) BS01 rna N/A GO:0002184 ... P62495 41577716
    1050772 9qlp:CR (2.75) BS02 rna N/A GO:0002184 ... P62495 41577716
    1050773 9qlp:CR (2.75) BS03 rna N/A GO:0002184 ... P62495 41577716
    1050774 9qlp:CR (2.75) BS04 rna N/A GO:0002184 ... P62495 41577716
    1050775 9qlp:CZ (2.75) BS01 rna N/A GO:0000139 ... P84077 41577716
    1050776 9qlp:CZ (2.75) BS02 G3D N/A GO:0000139 ... P84077 41577716
    1050777 9qlp:LA (2.75) BS01 rna N/A GO:0002181 ... P62917 41577716
    1050778 9qlp:LA (2.75) BS02 rna N/A GO:0002181 ... P62917 41577716
    1050779 9qlp:LA (2.75) BS03 MG N/A GO:0002181 ... P62917 41577716
    1050780 9qlp:LB (2.75) BS01 rna N/A GO:0002181 ... P39023 41577716
    1050781 9qlp:LC (2.75) BS01 rna N/A GO:0002181 ... P36578 41577716
    1050782 9qlp:LC (2.75) BS02 rna N/A GO:0002181 ... P36578 41577716
    1050783 9qlp:LD (2.75) BS01 rna N/A GO:0000027 ... P46777 41577716
    1050784 9qlp:LD (2.75) BS02 rna N/A GO:0000027 ... P46777 41577716
    1050785 9qlp:LE (2.75) BS01 rna N/A GO:0002181 ... Q02878 41577716
    1050786 9qlp:LF (2.75) BS01 rna N/A GO:0000463 ... P18124 41577716
    1050787 9qlp:LF (2.75) BS02 rna N/A GO:0000463 ... P18124 41577716
    1050788 9qlp:LG (2.75) BS01 rna N/A GO:0000470 ... P62424 41577716
    1050789 9qlp:LG (2.75) BS02 rna N/A GO:0000470 ... P62424 41577716
    1050790 9qlp:LH (2.75) BS01 rna N/A GO:0002181 ... P32969 41577716
    1050791 9qlp:LI (2.75) BS01 rna N/A GO:0000027 ... Q96L21 41577716
    1050792 9qlp:LI (2.75) BS02 rna N/A GO:0000027 ... Q96L21 41577716
    1050793 9qlp:LJ (2.75) BS01 rna N/A GO:0000027 ... P62913 41577716
    1050794 9qlp:LJ (2.75) BS02 rna N/A GO:0000027 ... P62913 41577716
    1050795 9qlp:LJ (2.75) BS03 rna N/A GO:0000027 ... P62913 41577716
    1050796 9qlp:LL (2.75) BS01 rna N/A GO:0002181 ... P26373 41577716
    1050797 9qlp:LL (2.75) BS02 rna N/A GO:0002181 ... P26373 41577716
    1050798 9qlp:LM (2.75) BS01 rna N/A GO:0002181 ... P50914 41577716
    1050799 9qlp:LN (2.75) BS01 rna N/A GO:0002181 ... P61313 41577716
    1050800 9qlp:LN (2.75) BS02 rna N/A GO:0002181 ... P61313 41577716

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).