SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1051001 9qm0:A (1.833) BS01 MGD N/A GO:0005515 ... Q72EJ1 N/A
    1051002 9qm0:A (1.833) BS02 MGD N/A GO:0005515 ... Q72EJ1 N/A
    1051003 9qm0:A (1.833) BS03 SF4 N/A GO:0005515 ... Q72EJ1 N/A
    1051004 9qm0:B (1.833) BS01 SF4 N/A GO:0030313 ... Q72EJ0 N/A
    1051005 9qm0:B (1.833) BS02 SF4 N/A GO:0030313 ... Q72EJ0 N/A
    1051006 9qm0:B (1.833) BS03 SF4 N/A GO:0030313 ... Q72EJ0 N/A
    1051007 9qm1:A (1.997) BS01 MGD N/A GO:0005515 ... Q72EJ1 N/A
    1051008 9qm1:A (1.997) BS02 MGD N/A GO:0005515 ... Q72EJ1 N/A
    1051009 9qm1:A (1.997) BS03 SF4 N/A GO:0005515 ... Q72EJ1 N/A
    1051010 9qm1:B (1.997) BS01 SF4 N/A GO:0030313 ... Q72EJ0 N/A
    1051011 9qm1:B (1.997) BS02 SF4 N/A GO:0030313 ... Q72EJ0 N/A
    1051012 9qm1:B (1.997) BS03 SF4 N/A GO:0030313 ... Q72EJ0 N/A
    1051013 9qm2:A (2.4) BS01 FAD N/A GO:0016491 ... W8QLE8 41588612
    1051014 9qm3:A (3.1) BS01 FAD N/A GO:0016491 ... W8QLE8 41588612
    1051015 9qm4:A (2.7) BS01 FAD N/A GO:0016491 ... W8QLE8 41588612
    1051016 9qm5:A (1.8) BS01 TP7 N/A GO:0015948 ... G7WN24 40913044
    1051017 9qm5:A (1.8) BS02 F43 N/A GO:0015948 ... G7WN24 40913044
    1051018 9qm5:A (1.8) BS03 COM N/A GO:0015948 ... G7WN24 40913044
    1051019 9qm5:A (1.8) BS04 TP7 N/A GO:0015948 ... G7WN24 40913044
    1051020 9qm5:A (1.8) BS05 F43 N/A GO:0015948 ... G7WN24 40913044
    1051021 9qm5:B (1.8) BS01 TP7 N/A GO:0015948 ... G7WN21 40913044
    1051022 9qm5:B (1.8) BS02 F43 N/A GO:0015948 ... G7WN21 40913044
    1051023 9qm5:B (1.8) BS03 COM N/A GO:0015948 ... G7WN21 40913044
    1051024 9qm5:C (1.8) BS01 F43 N/A GO:0015948 ... N/A 40913044
    1051025 9qm5:D (1.8) BS01 TP7 N/A GO:0015948 ... G7WN24 40913044
    1051026 9qm5:D (1.8) BS02 F43 N/A GO:0015948 ... G7WN24 40913044
    1051027 9qm5:D (1.8) BS03 TP7 N/A GO:0015948 ... G7WN24 40913044
    1051028 9qm5:D (1.8) BS04 COM N/A GO:0015948 ... G7WN24 40913044
    1051029 9qm5:D (1.8) BS05 F43 N/A GO:0015948 ... G7WN24 40913044
    1051030 9qm5:E (1.8) BS01 TP7 N/A GO:0015948 ... G7WN21 40913044
    1051031 9qm5:E (1.8) BS02 COM N/A GO:0015948 ... G7WN21 40913044
    1051032 9qm5:E (1.8) BS03 F43 N/A GO:0015948 ... G7WN21 40913044
    1051033 9qm5:F (1.8) BS01 F43 N/A GO:0015948 ... N/A 40913044
    1051034 9qm5:G (1.8) BS01 COM N/A GO:0015948 ... G7WN24 40913044
    1051035 9qm5:G (1.8) BS02 TP7 N/A GO:0015948 ... G7WN24 40913044
    1051036 9qm5:G (1.8) BS03 F43 N/A GO:0015948 ... G7WN24 40913044
    1051037 9qm5:G (1.8) BS04 F43 N/A GO:0015948 ... G7WN24 40913044
    1051038 9qm5:G (1.8) BS05 TP7 N/A GO:0015948 ... G7WN24 40913044
    1051039 9qm5:H (1.8) BS01 COM N/A GO:0015948 ... G7WN21 40913044
    1051040 9qm5:H (1.8) BS02 TP7 N/A GO:0015948 ... G7WN21 40913044
    1051041 9qm5:H (1.8) BS03 F43 N/A GO:0015948 ... G7WN21 40913044
    1051042 9qm5:I (1.8) BS01 F43 N/A GO:0015948 ... N/A 40913044
    1051043 9qm5:J (1.8) BS01 TP7 N/A GO:0015948 ... G7WN24 40913044
    1051044 9qm5:J (1.8) BS02 F43 N/A GO:0015948 ... G7WN24 40913044
    1051045 9qm5:J (1.8) BS03 F43 N/A GO:0015948 ... G7WN24 40913044
    1051046 9qm5:J (1.8) BS04 TP7 N/A GO:0015948 ... G7WN24 40913044
    1051047 9qm5:J (1.8) BS05 COM N/A GO:0015948 ... G7WN24 40913044
    1051048 9qm5:K (1.8) BS01 F43 N/A GO:0015948 ... G7WN21 40913044
    1051049 9qm5:K (1.8) BS02 TP7 N/A GO:0015948 ... G7WN21 40913044
    1051050 9qm5:K (1.8) BS03 COM N/A GO:0015948 ... G7WN21 40913044
    1051051 9qm5:L (1.8) BS01 F43 N/A GO:0015948 ... N/A 40913044
    1051052 9qm6:A (2.607) BS01 NLE N/A GO:0000096 ... R7RTI8 41005402
    1051053 9qm6:B (2.607) BS01 NLE N/A GO:0000096 ... R7RTI8 41005402
    1051054 9qm6:C (2.607) BS01 NLE N/A GO:0000096 ... R7RTI8 41005402
    1051055 9qm6:D (2.607) BS01 NLE N/A GO:0000096 ... R7RTI8 41005402
    1051056 9qm9:A (1.55) BS01 peptide N/A GO:0034597 ... Q86T03 41314214
    1051057 9qm9:A (1.55) BS02 ZN N/A GO:0034597 ... Q86T03 41314214
    1051058 9qm9:A (1.55) BS03 ZN N/A GO:0034597 ... Q86T03 41314214
    1051059 9qm9:B (1.55) BS01 ZN N/A GO:0034597 ... Q86T03 41314214
    1051060 9qm9:B (1.55) BS02 ZN N/A GO:0034597 ... Q86T03 41314214
    1051061 9qme:A (2.25) BS01 HEC N/A N/A G1UBD5 40843530
    1051062 9qme:A (2.25) BS02 NO N/A N/A G1UBD5 40843530
    1051063 9qme:B (2.25) BS01 HEC N/A N/A G1UBD5 40843530
    1051064 9qme:B (2.25) BS02 NO N/A N/A G1UBD5 40843530
    1051065 9qmr:A (1.78) BS01 A1I7K N/A N/A O68183 41310159
    1051066 9qmr:B (1.78) BS01 A1I7K N/A N/A O68183 41310159
    1051067 9qms:A (5.0) BS01 dna N/A GO:0000786 ... P68431 41444611
    1051068 9qms:A (5.0) BS02 dna N/A GO:0000786 ... P68431 41444611
    1051069 9qms:B (5.0) BS01 dna N/A GO:0000781 ... P62805 41444611
    1051070 9qms:B (5.0) BS02 dna N/A GO:0000781 ... P62805 41444611
    1051071 9qms:C (5.0) BS01 dna N/A GO:0000077 ... P16104 41444611
    1051072 9qms:C (5.0) BS02 dna N/A GO:0000077 ... P16104 41444611
    1051073 9qms:D (5.0) BS01 dna N/A GO:0000786 ... P06899 41444611
    1051074 9qms:D (5.0) BS02 dna N/A GO:0000786 ... P06899 41444611
    1051075 9qms:E (5.0) BS01 dna N/A GO:0000786 ... P68431 41444611
    1051076 9qms:E (5.0) BS02 dna N/A GO:0000786 ... P68431 41444611
    1051077 9qms:F (5.0) BS01 dna N/A GO:0000781 ... P62805 41444611
    1051078 9qms:F (5.0) BS02 dna N/A GO:0000781 ... P62805 41444611
    1051079 9qms:G (5.0) BS01 dna N/A GO:0000077 ... P16104 41444611
    1051080 9qms:G (5.0) BS02 dna N/A GO:0000077 ... P16104 41444611
    1051081 9qms:H (5.0) BS01 dna N/A GO:0000786 ... P06899 41444611
    1051082 9qms:H (5.0) BS02 dna N/A GO:0000786 ... P06899 41444611
    1051083 9qms:K (5.0) BS01 dna N/A GO:0000723 ... P12956 41444611
    1051084 9qms:L (5.0) BS01 dna N/A GO:0000723 ... P13010 41444611
    1051085 9qms:L (5.0) BS02 dna N/A GO:0000723 ... P13010 41444611
    1051086 9qms:M (5.0) BS01 dna N/A GO:0000723 ... P12956 41444611
    1051087 9qms:M (5.0) BS02 dna N/A GO:0000723 ... P12956 41444611
    1051088 9qms:N (5.0) BS01 dna N/A GO:0000723 ... P13010 41444611
    1051089 9qms:N (5.0) BS02 dna N/A GO:0000723 ... P13010 41444611
    1051090 9qms:O (5.0) BS01 dna N/A GO:0000460 ... P78527 41444611
    1051091 9qms:O (5.0) BS02 dna N/A GO:0000460 ... P78527 41444611
    1051092 9qms:a (5.0) BS01 dna N/A GO:0000786 ... P68431 41444611
    1051093 9qms:a (5.0) BS02 dna N/A GO:0000786 ... P68431 41444611
    1051094 9qms:b (5.0) BS01 dna N/A GO:0000781 ... P62805 41444611
    1051095 9qms:b (5.0) BS02 dna N/A GO:0000781 ... P62805 41444611
    1051096 9qms:c (5.0) BS01 dna N/A GO:0000077 ... P16104 41444611
    1051097 9qms:c (5.0) BS02 dna N/A GO:0000077 ... P16104 41444611
    1051098 9qms:d (5.0) BS01 dna N/A GO:0000786 ... P06899 41444611
    1051099 9qms:e (5.0) BS01 dna N/A GO:0000786 ... P68431 41444611
    1051100 9qms:e (5.0) BS02 dna N/A GO:0000786 ... P68431 41444611
    1051101 9qms:f (5.0) BS01 dna N/A GO:0000781 ... P62805 41444611
    1051102 9qms:f (5.0) BS02 dna N/A GO:0000781 ... P62805 41444611
    1051103 9qms:g (5.0) BS01 dna N/A GO:0000077 ... P16104 41444611
    1051104 9qms:g (5.0) BS02 dna N/A GO:0000077 ... P16104 41444611
    1051105 9qms:h (5.0) BS01 dna N/A GO:0000786 ... P06899 41444611
    1051106 9qms:k (5.0) BS01 dna N/A GO:0000723 ... P12956 41444611
    1051107 9qms:k (5.0) BS02 dna N/A GO:0000723 ... P12956 41444611
    1051108 9qms:l (5.0) BS01 dna N/A GO:0000723 ... P13010 41444611
    1051109 9qms:l (5.0) BS02 dna N/A GO:0000723 ... P13010 41444611
    1051110 9qms:m (5.0) BS01 dna N/A GO:0000723 ... P12956 41444611
    1051111 9qms:m (5.0) BS02 dna N/A GO:0000723 ... P12956 41444611
    1051112 9qms:n (5.0) BS01 dna N/A GO:0000723 ... P13010 41444611
    1051113 9qms:n (5.0) BS02 dna N/A GO:0000723 ... P13010 41444611
    1051114 9qms:o (5.0) BS01 dna N/A GO:0000460 ... P78527 41444611
    1051115 9qn6:A (2.3) BS01 A1I7W N/A N/A O68183 41310159
    1051116 9qn6:B (2.3) BS01 A1I7W N/A N/A O68183 41310159
    1051117 9qn7:A (2.76) BS01 peptide N/A GO:0007155 ... P26039 41269158
    1051118 9qn7:B (2.76) BS01 peptide N/A GO:0007155 ... P26039 41269158
    1051119 9qn7:B (2.76) BS02 peptide N/A GO:0007155 ... P26039 41269158
    1051120 9qn8:A (3.14) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051121 9qn8:A (3.14) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051122 9qn8:A (3.14) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051123 9qn8:A (3.14) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051124 9qn8:C (3.14) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051125 9qn8:C (3.14) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051126 9qn8:C (3.14) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051127 9qn8:C (3.14) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051128 9qn8:E (3.14) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051129 9qn8:E (3.14) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051130 9qn8:E (3.14) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051131 9qn8:E (3.14) BS04 CA N/A GO:0000150 ... Q06609 41337480
    1051132 9qn8:E (3.14) BS05 ATP N/A GO:0000150 ... Q06609 41337480
    1051133 9qn8:G (3.14) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051134 9qn8:G (3.14) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051135 9qn8:G (3.14) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051136 9qn8:G (3.14) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051137 9qn8:I (3.14) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051138 9qn8:I (3.14) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051139 9qn8:I (3.14) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051140 9qn8:I (3.14) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051141 9qn8:K (3.14) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051142 9qn8:K (3.14) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051143 9qn8:K (3.14) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051144 9qn8:K (3.14) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051145 9qn8:K (3.14) BS05 CA N/A GO:0000150 ... Q06609 41337480
    1051146 9qna:A (3.26) BS01 dna N/A GO:0000150 ... Q06609 41337480
    1051147 9qna:A (3.26) BS02 ATP N/A GO:0000150 ... Q06609 41337480
    1051148 9qna:A (3.26) BS03 MG N/A GO:0000150 ... Q06609 41337480
    1051149 9qna:A (3.26) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051150 9qna:C (3.26) BS01 dna N/A GO:0000150 ... Q06609 41337480
    1051151 9qna:C (3.26) BS02 ATP N/A GO:0000150 ... Q06609 41337480
    1051152 9qna:C (3.26) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051153 9qna:E (3.26) BS01 dna N/A GO:0000150 ... Q06609 41337480
    1051154 9qna:E (3.26) BS02 ATP N/A GO:0000150 ... Q06609 41337480
    1051155 9qna:E (3.26) BS03 MG N/A GO:0000150 ... Q06609 41337480
    1051156 9qna:E (3.26) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051157 9qna:G (3.26) BS01 dna N/A GO:0000150 ... Q06609 41337480
    1051158 9qna:G (3.26) BS02 ATP N/A GO:0000150 ... Q06609 41337480
    1051159 9qna:I (3.26) BS01 dna N/A GO:0000150 ... Q06609 41337480
    1051160 9qna:I (3.26) BS02 ATP N/A GO:0000150 ... Q06609 41337480
    1051161 9qna:I (3.26) BS03 MG N/A GO:0000150 ... Q06609 41337480
    1051162 9qna:K (3.26) BS01 dna N/A GO:0000150 ... Q06609 41337480
    1051163 9qna:K (3.26) BS02 ATP N/A GO:0000150 ... Q06609 41337480
    1051164 9qna:K (3.26) BS03 MG N/A GO:0000150 ... Q06609 41337480
    1051165 9qnb:A (3.63) BS01 ADP N/A GO:0000150 ... Q06609 41337480
    1051166 9qnb:C (3.63) BS01 ADP N/A GO:0000150 ... Q06609 41337480
    1051167 9qnb:E (3.63) BS01 ADP N/A GO:0000150 ... Q06609 41337480
    1051168 9qnb:G (3.63) BS01 ADP N/A GO:0000150 ... Q06609 41337480
    1051169 9qnb:I (3.63) BS01 ADP N/A GO:0000150 ... Q06609 41337480
    1051170 9qnb:K (3.63) BS01 ADP N/A GO:0000150 ... Q06609 41337480
    1051171 9qnc:A (2.98) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051172 9qnc:A (2.98) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051173 9qnc:A (2.98) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051174 9qnc:A (2.98) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051175 9qnc:C (2.98) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051176 9qnc:C (2.98) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051177 9qnc:C (2.98) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051178 9qnc:C (2.98) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051179 9qnc:E (2.98) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051180 9qnc:E (2.98) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051181 9qnc:E (2.98) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051182 9qnc:E (2.98) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051183 9qnc:G (2.98) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051184 9qnc:G (2.98) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051185 9qnc:G (2.98) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051186 9qnc:G (2.98) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051187 9qnc:I (2.98) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051188 9qnc:I (2.98) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051189 9qnc:I (2.98) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051190 9qnc:K (2.98) BS01 peptide N/A GO:0000150 ... Q06609 41337480
    1051191 9qnc:K (2.98) BS02 dna N/A GO:0000150 ... Q06609 41337480
    1051192 9qnc:K (2.98) BS03 ATP N/A GO:0000150 ... Q06609 41337480
    1051193 9qnc:K (2.98) BS04 ATP N/A GO:0000150 ... Q06609 41337480
    1051194 9qne:A (1.84) BS01 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051195 9qng:A (1.35) BS01 peptide N/A GO:0001836 ... P31947 40837623
    1051196 9qnh:A (1.3) BS01 peptide N/A GO:0001836 ... P31947 40837623
    1051197 9qnh:A (1.3) BS02 CA N/A GO:0001836 ... P31947 40837623
    1051198 9qni:A (1.8) BS01 peptide N/A GO:0001836 ... P31947 40837623
    1051199 9qni:A (1.8) BS02 CA N/A GO:0001836 ... P31947 40837623
    1051200 9qnj:A (1.3) BS01 peptide N/A GO:0001836 ... P31947 40837623

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).