SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1051201 9qnj:A (1.3) BS02 CA N/A GO:0001836 ... P31947 40837623
    1051202 9qnj:A (1.3) BS03 CA N/A GO:0001836 ... P31947 40837623
    1051203 9qnk:A (1.6) BS01 peptide N/A GO:0001836 ... P31947 40837623
    1051204 9qnk:A (1.6) BS02 MG N/A GO:0001836 ... P31947 40837623
    1051205 9qnk:A (1.6) BS03 CA N/A GO:0001836 ... P31947 40837623
    1051206 9qnl:A (1.3) BS01 peptide N/A GO:0001836 ... P31947 40837623
    1051207 9qnl:A (1.3) BS02 CA N/A GO:0001836 ... P31947 40837623
    1051208 9qnn:B (2.65) BS01 A1I72 N/A N/A O68183 41310159
    1051209 9qnp:A (2.3) BS01 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051210 9qnp:A (2.3) BS02 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051211 9qnp:B (2.3) BS01 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051212 9qnp:B (2.3) BS02 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051213 9qnp:C (2.3) BS01 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051214 9qnp:C (2.3) BS02 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051215 9qnp:D (2.3) BS01 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051216 9qnp:D (2.3) BS02 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051217 9qnq:A (2.38) BS01 A1I73 N/A N/A O68183 41310159
    1051218 9qnq:B (2.38) BS01 A1I73 N/A N/A O68183 41310159
    1051219 9qns:A (2.0) BS01 A1I74 N/A N/A O68183 41310159
    1051220 9qns:B (2.0) BS01 A1I74 N/A N/A O68183 41310159
    1051221 9qnt:A (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051222 9qnt:A (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051223 9qnt:B (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051224 9qnt:B (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051225 9qnt:C (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051226 9qnt:C (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051227 9qnt:D (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051228 9qnt:D (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051229 9qnt:E (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051230 9qnt:E (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051231 9qnt:F (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051232 9qnt:F (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051233 9qnt:G (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051234 9qnt:G (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051235 9qnt:H (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051236 9qnt:H (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051237 9qnt:I (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051238 9qnt:I (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051239 9qnt:J (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051240 9qnt:J (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051241 9qnt:K (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051242 9qnt:K (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051243 9qnt:L (3.29) BS01 CLR N/A GO:0005243 ... P08034 41350533
    1051244 9qnt:L (3.29) BS02 CLR N/A GO:0005243 ... P08034 41350533
    1051245 9qnv:A (1.226) BS01 A1I76 N/A N/A O60885 N/A
    1051246 9qnw:A (2.3) BS01 A1I75 N/A N/A O68183 41310159
    1051247 9qnw:B (2.3) BS01 A1I75 N/A N/A O68183 41310159
    1051248 9qnx:A (2.11) BS01 A1I79 N/A N/A O68183 41310159
    1051249 9qnx:B (2.11) BS01 A1I79 N/A N/A O68183 41310159
    1051250 9qny:A (2.41) BS01 A1I78 N/A N/A O68183 41310159
    1051251 9qny:B (2.41) BS01 A1I78 N/A N/A O68183 41310159
    1051252 9qnz:A (1.88) BS01 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051253 9qnz:A (1.88) BS02 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051254 9qnz:B (1.88) BS01 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051255 9qnz:B (1.88) BS02 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051256 9qnz:C (1.88) BS01 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051257 9qnz:C (1.88) BS02 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051258 9qnz:D (1.88) BS01 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051259 9qnz:D (1.88) BS02 A1I7Y N/A GO:0005576 ... P22629 41182164
    1051260 9qo0:B (3.26) BS01 IHP N/A GO:0000122 ... P61201 41577659
    1051261 9qo0:C (3.26) BS01 peptide N/A GO:0000338 ... Q9UNS2 41577659
    1051262 9qo0:H (3.26) BS01 peptide N/A GO:0000338 ... Q99627 41577659
    1051263 9qo0:J (3.26) BS01 ZN N/A GO:0000082 ... P62877 41577659
    1051264 9qo0:J (3.26) BS02 ZN N/A GO:0000082 ... P62877 41577659
    1051265 9qo0:J (3.26) BS03 ZN N/A GO:0000082 ... P62877 41577659
    1051266 9qo1:B (3.23) BS01 IHP N/A GO:0000122 ... P61201 41577659
    1051267 9qo1:C (3.23) BS01 peptide N/A GO:0000338 ... Q9UNS2 41577659
    1051268 9qo1:H (3.23) BS01 peptide N/A GO:0000338 ... Q99627 41577659
    1051269 9qo1:J (3.23) BS01 ZN N/A GO:0000082 ... P62877 41577659
    1051270 9qo1:J (3.23) BS02 ZN N/A GO:0000082 ... P62877 41577659
    1051271 9qo1:J (3.23) BS03 ZN N/A GO:0000082 ... P62877 41577659
    1051272 9qo2:C (3.8) BS01 peptide N/A GO:0000338 ... Q9UNS2 41577659
    1051273 9qo2:H (3.8) BS01 peptide N/A GO:0000338 ... Q99627 41577659
    1051274 9qo2:J (3.8) BS01 ZN N/A GO:0000082 ... P62877 41577659
    1051275 9qo2:J (3.8) BS02 ZN N/A GO:0000082 ... P62877 41577659
    1051276 9qo2:J (3.8) BS03 ZN N/A GO:0000082 ... P62877 41577659
    1051277 9qo3:C (4.6) BS01 peptide N/A GO:0000338 ... Q9UNS2 41577659
    1051278 9qo3:E (4.6) BS01 ZN N/A GO:0000338 ... Q92905 41577659
    1051279 9qo4:B (2.95) BS01 IHP N/A GO:0000122 ... P61201 41577659
    1051280 9qo4:C (2.95) BS01 peptide N/A GO:0000338 ... Q9UNS2 41577659
    1051281 9qo4:E (2.95) BS01 ZN N/A GO:0000338 ... Q92905 41577659
    1051282 9qo4:H (2.95) BS01 peptide N/A GO:0000338 ... Q99627 41577659
    1051283 9qo4:J (2.95) BS01 ZN N/A GO:0000082 ... P62877 41577659
    1051284 9qo4:J (2.95) BS02 ZN N/A GO:0000082 ... P62877 41577659
    1051285 9qo4:J (2.95) BS03 ZN N/A GO:0000082 ... P62877 41577659
    1051286 9qo5:B (4.0) BS01 IHP N/A GO:0000122 ... P61201 41577659
    1051287 9qo5:C (4.0) BS01 peptide N/A GO:0000338 ... Q9UNS2 41577659
    1051288 9qo5:E (4.0) BS01 ZN N/A GO:0000338 ... Q92905 41577659
    1051289 9qo5:H (4.0) BS01 peptide N/A GO:0000338 ... Q99627 41577659
    1051290 9qo5:I (4.0) BS01 peptide N/A GO:0000082 ... Q13616 41577659
    1051291 9qo6:C (3.0) BS01 peptide N/A GO:0000338 ... Q9UNS2 41577659
    1051292 9qo6:E (3.0) BS01 ZN N/A GO:0000338 ... Q92905 41577659
    1051293 9qo6:H (3.0) BS01 peptide N/A GO:0000338 ... Q99627 41577659
    1051294 9qo8:A (2.9) BS01 A1I87 N/A GO:0001504 ... P48066 41611703
    1051295 9qo9:A (3.2) BS01 ABU N/A GO:0001504 ... P48066 41611703
    1051296 9qob:A (1.37) BS01 A1I8D N/A N/A O60885 N/A
    1051297 9qoc:A (1.99) BS01 A1I8A N/A N/A O68183 41310159
    1051298 9qoc:B (1.99) BS01 A1I8A N/A N/A O68183 41310159
    1051299 9qod:A (2.29) BS01 A1I8B N/A N/A O68183 41310159
    1051300 9qod:B (2.29) BS01 A1I8B N/A N/A O68183 41310159
    1051301 9qoe:A (2.3) BS01 A1I77 N/A N/A O68183 41310159
    1051302 9qoe:B (2.3) BS01 A1I77 N/A N/A O68183 41310159
    1051303 9qof:A (2.32) BS01 SSA N/A GO:0000166 ... P0A8L1 8065908
    1051304 9qof:B (2.32) BS01 SSA N/A GO:0000166 ... P0A8L1 8065908
    1051305 9qoi:A (1.81) BS01 A1I8G N/A N/A O68183 41310159
    1051306 9qoi:B (1.81) BS01 A1I8G N/A N/A O68183 41310159
    1051307 9qok:A (1.88) BS01 A1I8F N/A N/A O68183 41310159
    1051308 9qok:B (1.88) BS01 A1I8F N/A N/A O68183 41310159
    1051309 9qol:A (2.13) BS01 PWD N/A N/A O68183 41310159
    1051310 9qol:B (2.13) BS01 PWD N/A N/A O68183 41310159
    1051311 9qom:A (2.13) BS01 A1I8E N/A N/A O68183 41310159
    1051312 9qom:B (2.13) BS01 A1I8E N/A N/A O68183 41310159
    1051313 9qor:A (2.44) BS01 A1I8H N/A N/A O68183 41345223
    1051314 9qor:B (2.44) BS01 A1I8H N/A N/A O68183 41345223
    1051315 9qos:A (1.97) BS01 A1I8B N/A GO:0008910 ... Q9HWR2 41310159
    1051316 9qos:B (1.97) BS01 A1I8B N/A GO:0008910 ... Q9HWR2 41310159
    1051317 9qot:A (2.3) BS01 A1I8M N/A N/A O68183 41345223
    1051318 9qot:B (2.3) BS01 A1I8M N/A N/A O68183 41345223
    1051319 9qou:A (2.55) BS01 A1I8O N/A N/A O68183 41345223
    1051320 9qou:B (2.55) BS01 A1I8O N/A N/A O68183 41345223
    1051321 9qow:A (2.45) BS01 A1I8X N/A N/A O68183 41345223
    1051322 9qow:B (2.45) BS01 A1I8X N/A N/A O68183 41345223
    1051323 9qox:A (2.06) BS01 A1I8S N/A N/A O68183 41345223
    1051324 9qox:B (2.06) BS01 A1I8S N/A N/A O68183 41345223
    1051325 9qoz:A (2.5) BS01 A1I8T N/A N/A O68183 41345223
    1051326 9qoz:B (2.5) BS01 A1I8T N/A N/A O68183 41345223
    1051327 9qp0:A (2.68) BS01 A1I8U N/A N/A O68183 41345223
    1051328 9qp0:B (2.68) BS01 A1I8U N/A N/A O68183 41345223
    1051329 9qp1:A (2.65) BS01 A1I8V N/A N/A O68183 41345223
    1051330 9qp1:B (2.65) BS01 A1I8V N/A N/A O68183 41345223
    1051331 9qp2:A (2.05) BS01 A1I8W N/A N/A O68183 41345223
    1051332 9qp2:B (2.05) BS01 A1I8W N/A N/A O68183 41345223
    1051333 9qp3:A (2.0) BS01 A1I8Y N/A N/A O68183 41345223
    1051334 9qp3:B (2.0) BS01 A1I8Y N/A N/A O68183 41345223
    1051335 9qp5:A (2.35) BS01 A1I8Z N/A N/A O68183 41345223
    1051336 9qp5:B (2.35) BS01 A1I8Z N/A N/A O68183 41345223
    1051337 9qp6:A (2.35) BS01 A1I80 N/A N/A O68183 41345223
    1051338 9qp6:B (2.35) BS01 A1I80 N/A N/A O68183 41345223
    1051339 9qp7:A (2.5) BS01 A1I81 N/A N/A O68183 41345223
    1051340 9qp7:B (2.5) BS01 A1I81 N/A N/A O68183 41345223
    1051341 9qp9:A (2.3) BS01 A1I84 N/A N/A O68183 41310159
    1051342 9qp9:B (2.3) BS01 A1I84 N/A N/A O68183 41310159
    1051343 9qpa:A (2.5) BS01 A1I82 N/A N/A O68183 41345223
    1051344 9qpa:B (2.5) BS01 A1I82 N/A N/A O68183 41345223
    1051345 9qpb:A (1.86) BS01 A1I83 N/A N/A O68183 41310159
    1051346 9qpb:B (1.86) BS01 A1I83 N/A N/A O68183 41310159
    1051347 9qpc:A (2.8) BS01 dna N/A GO:0003676 ... N/A N/A
    1051348 9qpc:A (2.8) BS02 dna N/A GO:0003676 ... N/A N/A
    1051349 9qpc:A (2.8) BS03 dna N/A GO:0003676 ... N/A N/A
    1051350 9qpc:A (2.8) BS04 A1I88 N/A GO:0003676 ... N/A N/A
    1051351 9qpc:A (2.8) BS05 ZN N/A GO:0003676 ... N/A N/A
    1051352 9qpc:A (2.8) BS06 ZN N/A GO:0003676 ... N/A N/A
    1051353 9qpc:A (2.8) BS07 ZN N/A GO:0003676 ... N/A N/A
    1051354 9qpc:A (2.8) BS08 ZN N/A GO:0003676 ... N/A N/A
    1051355 9qpc:A (2.8) BS09 MG N/A GO:0003676 ... N/A N/A
    1051356 9qpd:A (2.3) BS01 GVH N/A N/A O68183 41310159
    1051357 9qpd:B (2.3) BS01 GVH N/A N/A O68183 41310159
    1051358 9qpl:A (2.04) BS01 A1I86 N/A N/A O68183 41310159
    1051359 9qpl:B (2.04) BS01 A1I86 N/A N/A O68183 41310159
    1051360 9qpm:A (1.4) BS01 CNC N/A N/A Q8A7N3 41831674
    1051361 9qpn:A (1.47) BS01 CBY N/A N/A Q8A7N3 41831674
    1051362 9qpq:H (7.5) BS01 peptide N/A GO:0000139 ... Q9JIF7 41042862
    1051363 9qpt:C (3.2) BS01 RHQ N/A GO:0005886 ... P37637 40236129
    1051364 9qpu:A (2.5) BS01 FUC N/A GO:0001540 ... P06276 41229096
    1051365 9qpu:A (2.5) BS02 FUC N/A GO:0001540 ... P06276 41229096
    1051366 9qpu:A (2.5) BS03 A1I9A N/A GO:0001540 ... P06276 41229096
    1051367 9qpu:A (2.5) BS04 ETM N/A GO:0001540 ... P06276 41229096
    1051368 9qpu:A (2.5) BS05 ETM N/A GO:0001540 ... P06276 41229096
    1051369 9qpu:A (2.5) BS06 A1I9A N/A GO:0001540 ... P06276 41229096
    1051370 9qpu:A (2.5) BS07 ETM N/A GO:0001540 ... P06276 41229096
    1051371 9qpw:A (3.8) BS01 E2Q N/A GO:0004970 ... P19493 40954371
    1051372 9qpw:B (3.8) BS01 E2Q N/A GO:0004970 ... P19493 40954371
    1051373 9qpw:C (3.8) BS01 E2Q N/A GO:0004970 ... P19493 40954371
    1051374 9qpw:D (3.8) BS01 E2Q N/A GO:0004970 ... P19493 40954371
    1051375 9qpx:A (3.0) BS01 peptide N/A N/A P38398 41354346
    1051376 9qpx:B (3.0) BS01 peptide N/A N/A P38398 41354346
    1051377 9qpx:C (3.0) BS01 peptide N/A N/A P38398 41354346
    1051378 9qpy:E (4.3) BS01 MG N/A N/A P06681 41413058
    1051379 9qpz:A (1.312) BS01 A1I89 N/A GO:0003924 ... P01116 40635203
    1051380 9qpz:A (1.312) BS02 GDP N/A GO:0003924 ... P01116 40635203
    1051381 9qq0:A (1.546) BS01 A1I9E N/A GO:0003924 ... P01116 40635203
    1051382 9qq0:A (1.546) BS02 GDP N/A GO:0003924 ... P01116 40635203
    1051383 9qq1:A (1.3) BS01 A1I9F N/A GO:0003924 ... P01116 40635203
    1051384 9qq1:A (1.3) BS02 GDP N/A GO:0003924 ... P01116 40635203
    1051385 9qq6:A (6.45) BS01 FAD N/A GO:0004673 ... C1DMA9 40915976
    1051386 9qq6:A (6.45) BS02 ADP N/A GO:0004673 ... C1DMA9 40915976
    1051387 9qq6:B (6.45) BS01 FAD N/A GO:0004673 ... C1DMA9 40915976
    1051388 9qq6:B (6.45) BS02 ADP N/A GO:0004673 ... C1DMA9 40915976
    1051389 9qq6:C (6.45) BS01 ADP N/A GO:0000160 ... C1DMB0 40915976
    1051390 9qqa:AA (2.8) BS01 rna N/A GO:0003735 ... G1TZ76 40639378
    1051391 9qqa:AB (2.8) BS01 rna N/A GO:0000028 ... G1TIB4 40639378
    1051392 9qqa:AC (2.8) BS01 rna N/A GO:0003735 ... G1SK22 40639378
    1051393 9qqa:AC (2.8) BS02 ZN N/A GO:0003735 ... G1SK22 40639378
    1051394 9qqa:AD (2.8) BS01 rna N/A GO:0003735 ... G1T8A2 40639378
    1051395 9qqa:AE (2.8) BS01 rna N/A GO:0003729 ... A0A2K5LQY6 40639378
    1051396 9qqa:AE (2.8) BS02 ZN N/A GO:0003729 ... A0A2K5LQY6 40639378
    1051397 9qqa:AF (2.8) BS01 rna N/A GO:0001891 ... G1SJB4 40639378
    1051398 9qqa:AG (2.8) BS01 rna N/A GO:0002181 ... G1U7M4 40639378
    1051399 9qqa:AG (2.8) BS02 ZN N/A GO:0002181 ... G1U7M4 40639378
    1051400 9qqa:AZ (2.8) BS01 rna N/A GO:0000028 ... G1TLT8 40639378

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).