SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1051401 9qqa:Aa (2.8) BS01 rna N/A GO:0003735 ... G1SS70 40639378
    1051402 9qqa:Ab (2.8) BS01 rna N/A GO:0003723 ... O18789 40639378
    1051403 9qqa:Ac (2.8) BS01 rna N/A GO:0003723 ... G1TNM3 40639378
    1051404 9qqa:Ad (2.8) BS01 rna N/A GO:0003723 ... G1TK17 40639378
    1051405 9qqa:Ae (2.8) BS01 rna N/A GO:0003723 ... G1TFM5 40639378
    1051406 9qqa:Af (2.8) BS01 rna N/A GO:0003735 ... G1TM55 40639378
    1051407 9qqa:Ag (2.8) BS01 rna N/A GO:0003735 ... G1SVB0 40639378
    1051408 9qqa:Ah (2.8) BS01 rna N/A GO:0003735 ... G1TJW1 40639378
    1051409 9qqa:Ah (2.8) BS02 rna N/A GO:0003735 ... G1TJW1 40639378
    1051410 9qqa:Ai (2.8) BS01 rna N/A GO:0003723 ... B7NZS8 40639378
    1051411 9qqa:Aj (2.8) BS01 rna N/A GO:0003723 ... G1TPV3 40639378
    1051412 9qqa:Ak (2.8) BS01 rna N/A GO:0003735 ... G1TRM4 40639378
    1051413 9qqa:Al (2.8) BS01 rna N/A GO:0003735 ... G1SFR8 40639378
    1051414 9qqa:Am (2.8) BS01 rna N/A GO:0003735 ... G1SP51 40639378
    1051415 9qqa:An (2.8) BS01 rna N/A GO:0003735 ... G1T1F0 40639378
    1051416 9qqa:Ao (2.8) BS01 rna N/A GO:0000028 ... G1U0Q2 40639378
    1051417 9qqa:Ao (2.8) BS02 rna N/A GO:0000028 ... G1U0Q2 40639378
    1051418 9qqa:Ap (2.8) BS01 rna N/A GO:0000462 ... G1SGX4 40639378
    1051419 9qqa:Aq (2.8) BS01 rna N/A GO:0003735 ... G1TU13 40639378
    1051420 9qqa:Ar (2.8) BS01 rna N/A GO:0003676 ... G1TPG3 40639378
    1051421 9qqa:As (2.8) BS01 rna N/A GO:0000028 ... G1TN62 40639378
    1051422 9qqa:At (2.8) BS01 rna N/A GO:0003723 ... G1SIZ2 40639378
    1051423 9qqa:Av (2.8) BS01 rna N/A GO:0003735 ... G1TG89 40639378
    1051424 9qqa:Aw (2.8) BS01 rna N/A GO:0003735 ... G1SZ47 40639378
    1051425 9qqa:Ax (2.8) BS01 rna N/A GO:0003735 ... G1T3D8 40639378
    1051426 9qqa:Ay (2.8) BS01 rna N/A GO:0003735 ... G1TDB3 40639378
    1051427 9qqa:Ay (2.8) BS02 rna N/A GO:0003735 ... G1TDB3 40639378
    1051428 9qqa:BA (2.8) BS01 rna N/A GO:0002181 ... G1TT27 40639378
    1051429 9qqa:BA (2.8) BS02 rna N/A GO:0002181 ... G1TT27 40639378
    1051430 9qqa:BB (2.8) BS01 rna N/A GO:0003723 ... G1TL06 40639378
    1051431 9qqa:BC (2.8) BS01 rna N/A GO:0003735 ... G1SVW5 40639378
    1051432 9qqa:BC (2.8) BS02 rna N/A GO:0003735 ... G1SVW5 40639378
    1051433 9qqa:BE (2.8) BS01 rna N/A GO:0000027 ... G1SKF7 40639378
    1051434 9qqa:BF (2.8) BS01 rna N/A GO:0000463 ... G1TUB1 40639378
    1051435 9qqa:BF (2.8) BS02 rna N/A GO:0000463 ... G1TUB1 40639378
    1051436 9qqa:BG (2.8) BS01 rna N/A GO:0000470 ... P62424 40639378
    1051437 9qqa:BG (2.8) BS02 rna N/A GO:0000470 ... P62424 40639378
    1051438 9qqa:BH (2.8) BS01 rna N/A GO:0002181 ... G1SWI6 40639378
    1051439 9qqa:BI (2.8) BS01 rna N/A GO:0003735 ... B7NZQ2 40639378
    1051440 9qqa:BI (2.8) BS02 rna N/A GO:0003735 ... B7NZQ2 40639378
    1051441 9qqa:BI (2.8) BS03 rna N/A GO:0003735 ... B7NZQ2 40639378
    1051442 9qqa:BJ (2.8) BS01 rna N/A GO:0003735 ... G1TUB8 40639378
    1051443 9qqa:BJ (2.8) BS02 rna N/A GO:0003735 ... G1TUB8 40639378
    1051444 9qqa:BJ (2.8) BS03 rna N/A GO:0003735 ... G1TUB8 40639378
    1051445 9qqa:BL (2.8) BS01 rna N/A GO:0003723 ... G1TKB3 40639378
    1051446 9qqa:BL (2.8) BS02 rna N/A GO:0003723 ... G1TKB3 40639378
    1051447 9qqa:BM (2.8) BS01 rna N/A GO:0003723 ... G1SZ12 40639378
    1051448 9qqa:BN (2.8) BS01 rna N/A GO:0002181 ... G1T0C1 40639378
    1051449 9qqa:BN (2.8) BS02 rna N/A GO:0002181 ... G1T0C1 40639378
    1051450 9qqa:BO (2.8) BS01 rna N/A GO:0003729 ... G1TVS8 40639378
    1051451 9qqa:BP (2.8) BS01 rna N/A GO:0002181 ... G1SCJ6 40639378
    1051452 9qqa:BP (2.8) BS02 rna N/A GO:0002181 ... G1SCJ6 40639378
    1051453 9qqa:BP (2.8) BS03 MG N/A GO:0002181 ... G1SCJ6 40639378
    1051454 9qqa:BQ (2.8) BS01 rna N/A GO:0002181 ... F6QKI9 40639378
    1051455 9qqa:BR (2.8) BS01 rna N/A GO:0003723 ... G1TJR3 40639378
    1051456 9qqa:BR (2.8) BS02 rna N/A GO:0003723 ... G1TJR3 40639378
    1051457 9qqa:BS (2.8) BS01 rna N/A GO:0003735 ... G1TTY7 40639378
    1051458 9qqa:BS (2.8) BS02 rna N/A GO:0003735 ... G1TTY7 40639378
    1051459 9qqa:BT (2.8) BS01 rna N/A GO:0003735 ... G1SHQ2 40639378
    1051460 9qqa:BU (2.8) BS01 rna N/A GO:0002181 ... G1TSG1 40639378
    1051461 9qqa:BV (2.8) BS01 rna N/A GO:0000122 ... G1T6D1 40639378
    1051462 9qqa:BW (2.8) BS01 rna N/A GO:0002181 ... G1SE28 40639378
    1051463 9qqa:BW (2.8) BS02 rna N/A GO:0002181 ... G1SE28 40639378
    1051464 9qqa:BX (2.8) BS01 rna N/A GO:0003735 ... G1SE76 40639378
    1051465 9qqa:BX (2.8) BS02 rna N/A GO:0003735 ... G1SE76 40639378
    1051466 9qqa:BY (2.8) BS01 rna N/A GO:0003723 ... G1SQH0 40639378
    1051467 9qqa:BY (2.8) BS02 rna N/A GO:0003723 ... G1SQH0 40639378
    1051468 9qqa:BZ (2.8) BS01 rna N/A GO:0002181 ... G1TXF6 40639378
    1051469 9qqa:Ba (2.8) BS01 rna N/A GO:0003735 ... G1SNY0 40639378
    1051470 9qqa:Bb (2.8) BS01 rna N/A GO:0002181 ... G1SGR6 40639378
    1051471 9qqa:Bc (2.8) BS01 rna N/A GO:0003723 ... G1TDL2 40639378
    1051472 9qqa:Bd (2.8) BS01 rna N/A GO:0002181 ... G1SHG0 40639378
    1051473 9qqa:Be (2.8) BS01 rna N/A GO:0003735 ... A0AAA9WVN6 40639378
    1051474 9qqa:Bf (2.8) BS01 rna N/A GO:0003735 ... G1SF08 40639378
    1051475 9qqa:Bg (2.8) BS01 rna N/A GO:0003735 ... G1TXG5 40639378
    1051476 9qqa:Bg (2.8) BS02 ZN N/A GO:0003735 ... G1TXG5 40639378
    1051477 9qqa:Bh (2.8) BS01 rna N/A GO:0000463 ... G1SIT5 40639378
    1051478 9qqa:Bh (2.8) BS02 rna N/A GO:0000463 ... G1SIT5 40639378
    1051479 9qqa:Bi (2.8) BS01 rna N/A GO:0003735 ... G1TTQ5 40639378
    1051480 9qqa:Bj (2.8) BS01 rna N/A GO:0002181 ... U3KPD5 40639378
    1051481 9qqa:Bj (2.8) BS02 rna N/A GO:0002181 ... U3KPD5 40639378
    1051482 9qqa:Bj (2.8) BS03 ZN N/A GO:0002181 ... U3KPD5 40639378
    1051483 9qqa:Bk (2.8) BS01 rna N/A GO:0003735 ... G1U001 40639378
    1051484 9qqa:Bl (2.8) BS01 rna N/A GO:0003735 ... G1TTN1 40639378
    1051485 9qqa:Bl (2.8) BS02 rna N/A GO:0003735 ... G1TTN1 40639378
    1051486 9qqa:Bm (2.8) BS01 rna N/A GO:0003735 ... P0DXC2 40639378
    1051487 9qqa:Bm (2.8) BS02 ZN N/A GO:0003735 ... P0DXC2 40639378
    1051488 9qqa:Bo (2.8) BS01 rna N/A GO:0003735 ... A0AAA9WX15 40639378
    1051489 9qqa:Bo (2.8) BS02 rna N/A GO:0003735 ... A0AAA9WX15 40639378
    1051490 9qqa:Bo (2.8) BS03 ZN N/A GO:0003735 ... A0AAA9WX15 40639378
    1051491 9qqa:Bp (2.8) BS01 rna N/A GO:0003735 ... G1SY53 40639378
    1051492 9qqa:Bp (2.8) BS02 ZN N/A GO:0003735 ... G1SY53 40639378
    1051493 9qqa:Br (2.8) BS01 rna N/A GO:0003735 ... A0A8C0DF35 40639378
    1051494 9qqa:Bs (2.8) BS01 rna N/A GO:0000027 ... G1SPK4 40639378
    1051495 9qqa:Bt (2.8) BS01 rna N/A GO:0003735 ... G1SMR7 40639378
    1051496 9qqa:Bv (2.8) BS01 rna N/A GO:0003723 ... G1SKZ8 40639378
    1051497 9qqa:Nt (2.8) BS01 rna N/A GO:0000122 ... Q13765 40639378
    1051498 9qqa:Nu (2.8) BS01 rna N/A N/A P20290 40639378
    1051499 9qqb:AA (3.43) BS01 rna N/A GO:0003735 ... G1TZ76 40639378
    1051500 9qqb:AB (3.43) BS01 rna N/A GO:0000028 ... G1TIB4 40639378
    1051501 9qqb:AC (3.43) BS01 rna N/A GO:0003735 ... G1SK22 40639378
    1051502 9qqb:AC (3.43) BS02 ZN N/A GO:0003735 ... G1SK22 40639378
    1051503 9qqb:AD (3.43) BS01 rna N/A GO:0003735 ... G1T8A2 40639378
    1051504 9qqb:AE (3.43) BS01 rna N/A GO:0003729 ... A0A1S3ADI9 40639378
    1051505 9qqb:AE (3.43) BS02 ZN N/A GO:0003729 ... A0A1S3ADI9 40639378
    1051506 9qqb:AF (3.43) BS01 rna N/A GO:0001891 ... G1SJB4 40639378
    1051507 9qqb:AG (3.43) BS01 rna N/A GO:0002181 ... G1U7M4 40639378
    1051508 9qqb:AG (3.43) BS02 ZN N/A GO:0002181 ... G1U7M4 40639378
    1051509 9qqb:AZ (3.43) BS01 rna N/A GO:0000028 ... G1TLT8 40639378
    1051510 9qqb:Aa (3.43) BS01 rna N/A GO:0003735 ... G1SS70 40639378
    1051511 9qqb:Ab (3.43) BS01 rna N/A GO:0003723 ... O18789 40639378
    1051512 9qqb:Ac (3.43) BS01 rna N/A GO:0003723 ... G1TNM3 40639378
    1051513 9qqb:Ad (3.43) BS01 rna N/A GO:0003723 ... G1TK17 40639378
    1051514 9qqb:Ae (3.43) BS01 rna N/A GO:0003723 ... G1TFM5 40639378
    1051515 9qqb:Af (3.43) BS01 rna N/A GO:0003735 ... G1TM55 40639378
    1051516 9qqb:Ag (3.43) BS01 rna N/A GO:0003735 ... G1SVB0 40639378
    1051517 9qqb:Ah (3.43) BS01 rna N/A GO:0003735 ... G1TJW1 40639378
    1051518 9qqb:Ah (3.43) BS02 rna N/A GO:0003735 ... G1TJW1 40639378
    1051519 9qqb:Ai (3.43) BS01 rna N/A GO:0003723 ... B7NZS8 40639378
    1051520 9qqb:Aj (3.43) BS01 rna N/A GO:0003723 ... G1TPV3 40639378
    1051521 9qqb:Ak (3.43) BS01 rna N/A GO:0003735 ... G1TRM4 40639378
    1051522 9qqb:Al (3.43) BS01 rna N/A GO:0003735 ... G1SFR8 40639378
    1051523 9qqb:Am (3.43) BS01 rna N/A GO:0003735 ... G1SP51 40639378
    1051524 9qqb:An (3.43) BS01 rna N/A GO:0003735 ... G1T1F0 40639378
    1051525 9qqb:Ao (3.43) BS01 rna N/A GO:0000028 ... G1U0Q2 40639378
    1051526 9qqb:Ap (3.43) BS01 rna N/A GO:0000462 ... G1SGX4 40639378
    1051527 9qqb:Aq (3.43) BS01 rna N/A GO:0003735 ... G1TU13 40639378
    1051528 9qqb:Ar (3.43) BS01 rna N/A GO:0003676 ... G1TPG3 40639378
    1051529 9qqb:As (3.43) BS01 rna N/A GO:0000028 ... G1TN62 40639378
    1051530 9qqb:At (3.43) BS01 rna N/A GO:0003723 ... G1SIZ2 40639378
    1051531 9qqb:Av (3.43) BS01 rna N/A GO:0003735 ... G1TG89 40639378
    1051532 9qqb:Aw (3.43) BS01 rna N/A GO:0003735 ... G1SZ47 40639378
    1051533 9qqb:Ax (3.43) BS01 rna N/A GO:0003735 ... G1T3D8 40639378
    1051534 9qqb:Ay (3.43) BS01 rna N/A GO:0003735 ... G1TDB3 40639378
    1051535 9qqb:Ay (3.43) BS02 rna N/A GO:0003735 ... G1TDB3 40639378
    1051536 9qqb:BA (3.43) BS01 rna N/A GO:0002181 ... G1TT27 40639378
    1051537 9qqb:BA (3.43) BS02 rna N/A GO:0002181 ... G1TT27 40639378
    1051538 9qqb:BB (3.43) BS01 rna N/A GO:0003723 ... G1TL06 40639378
    1051539 9qqb:BC (3.43) BS01 rna N/A GO:0003735 ... G1SVW5 40639378
    1051540 9qqb:BC (3.43) BS02 rna N/A GO:0003735 ... G1SVW5 40639378
    1051541 9qqb:BD (3.43) BS01 rna N/A GO:0000027 ... P19949 40639378
    1051542 9qqb:BD (3.43) BS02 rna N/A GO:0000027 ... P19949 40639378
    1051543 9qqb:BE (3.43) BS01 rna N/A GO:0000027 ... G1SKF7 40639378
    1051544 9qqb:BF (3.43) BS01 rna N/A GO:0000463 ... G1TUB1 40639378
    1051545 9qqb:BF (3.43) BS02 rna N/A GO:0000463 ... G1TUB1 40639378
    1051546 9qqb:BG (3.43) BS01 rna N/A GO:0000470 ... P62424 40639378
    1051547 9qqb:BG (3.43) BS02 rna N/A GO:0000470 ... P62424 40639378
    1051548 9qqb:BH (3.43) BS01 rna N/A GO:0002181 ... G1SWI6 40639378
    1051549 9qqb:BI (3.43) BS01 rna N/A GO:0003735 ... B7NZQ2 40639378
    1051550 9qqb:BI (3.43) BS02 rna N/A GO:0003735 ... B7NZQ2 40639378
    1051551 9qqb:BI (3.43) BS03 rna N/A GO:0003735 ... B7NZQ2 40639378
    1051552 9qqb:BJ (3.43) BS01 rna N/A GO:0003735 ... G1TUB8 40639378
    1051553 9qqb:BJ (3.43) BS02 rna N/A GO:0003735 ... G1TUB8 40639378
    1051554 9qqb:BJ (3.43) BS03 rna N/A GO:0003735 ... G1TUB8 40639378
    1051555 9qqb:BL (3.43) BS01 rna N/A GO:0003723 ... G1TKB3 40639378
    1051556 9qqb:BL (3.43) BS02 rna N/A GO:0003723 ... G1TKB3 40639378
    1051557 9qqb:BM (3.43) BS01 rna N/A GO:0003723 ... G1SZ12 40639378
    1051558 9qqb:BN (3.43) BS01 rna N/A GO:0002181 ... G1T0C1 40639378
    1051559 9qqb:BN (3.43) BS02 rna N/A GO:0002181 ... G1T0C1 40639378
    1051560 9qqb:BO (3.43) BS01 rna N/A GO:0003729 ... G1TVS8 40639378
    1051561 9qqb:BP (3.43) BS01 rna N/A GO:0002181 ... G1SCJ6 40639378
    1051562 9qqb:BP (3.43) BS02 rna N/A GO:0002181 ... G1SCJ6 40639378
    1051563 9qqb:BQ (3.43) BS01 rna N/A GO:0002181 ... F6QKI9 40639378
    1051564 9qqb:BR (3.43) BS01 rna N/A GO:0003723 ... G1TJR3 40639378
    1051565 9qqb:BR (3.43) BS02 rna N/A GO:0003723 ... G1TJR3 40639378
    1051566 9qqb:BS (3.43) BS01 rna N/A GO:0003735 ... G1TTY7 40639378
    1051567 9qqb:BS (3.43) BS02 rna N/A GO:0003735 ... G1TTY7 40639378
    1051568 9qqb:BT (3.43) BS01 rna N/A GO:0003735 ... G1SHQ2 40639378
    1051569 9qqb:BT (3.43) BS02 rna N/A GO:0003735 ... G1SHQ2 40639378
    1051570 9qqb:BU (3.43) BS01 rna N/A GO:0002181 ... G1TSG1 40639378
    1051571 9qqb:BV (3.43) BS01 rna N/A GO:0000122 ... G1T6D1 40639378
    1051572 9qqb:BW (3.43) BS01 rna N/A GO:0002181 ... G1SE28 40639378
    1051573 9qqb:BW (3.43) BS02 rna N/A GO:0002181 ... G1SE28 40639378
    1051574 9qqb:BX (3.43) BS01 rna N/A GO:0003735 ... G1SE76 40639378
    1051575 9qqb:BX (3.43) BS02 rna N/A GO:0003735 ... G1SE76 40639378
    1051576 9qqb:BY (3.43) BS01 rna N/A GO:0003723 ... G1SQH0 40639378
    1051577 9qqb:BY (3.43) BS02 rna N/A GO:0003723 ... G1SQH0 40639378
    1051578 9qqb:BZ (3.43) BS01 rna N/A GO:0002181 ... G1TXF6 40639378
    1051579 9qqb:Ba (3.43) BS01 rna N/A GO:0003735 ... G1SNY0 40639378
    1051580 9qqb:Bb (3.43) BS01 rna N/A GO:0002181 ... G1SGR6 40639378
    1051581 9qqb:Bc (3.43) BS01 rna N/A GO:0003723 ... G1TDL2 40639378
    1051582 9qqb:Bd (3.43) BS01 rna N/A GO:0002181 ... G1SHG0 40639378
    1051583 9qqb:Be (3.43) BS01 rna N/A GO:0003735 ... A0AAA9WVN6 40639378
    1051584 9qqb:Bf (3.43) BS01 rna N/A GO:0003735 ... G1SF08 40639378
    1051585 9qqb:Bg (3.43) BS01 rna N/A GO:0003735 ... G1TXG5 40639378
    1051586 9qqb:Bg (3.43) BS02 ZN N/A GO:0003735 ... G1TXG5 40639378
    1051587 9qqb:Bh (3.43) BS01 rna N/A GO:0000463 ... G1SIT5 40639378
    1051588 9qqb:Bh (3.43) BS02 rna N/A GO:0000463 ... G1SIT5 40639378
    1051589 9qqb:Bi (3.43) BS01 rna N/A GO:0003735 ... G1TTQ5 40639378
    1051590 9qqb:Bj (3.43) BS01 rna N/A GO:0002181 ... U3KPD5 40639378
    1051591 9qqb:Bj (3.43) BS02 rna N/A GO:0002181 ... U3KPD5 40639378
    1051592 9qqb:Bj (3.43) BS03 ZN N/A GO:0002181 ... U3KPD5 40639378
    1051593 9qqb:Bk (3.43) BS01 rna N/A GO:0003735 ... G1U001 40639378
    1051594 9qqb:Bl (3.43) BS01 rna N/A GO:0003735 ... G1TTN1 40639378
    1051595 9qqb:Bl (3.43) BS02 rna N/A GO:0003735 ... G1TTN1 40639378
    1051596 9qqb:Bm (3.43) BS01 rna N/A GO:0003735 ... P0DXC2 40639378
    1051597 9qqb:Bm (3.43) BS02 ZN N/A GO:0003735 ... P0DXC2 40639378
    1051598 9qqb:Bo (3.43) BS01 rna N/A GO:0003735 ... A0AAA9WX15 40639378
    1051599 9qqb:Bo (3.43) BS02 ZN N/A GO:0003735 ... A0AAA9WX15 40639378
    1051600 9qqb:Bp (3.43) BS01 rna N/A GO:0003735 ... G1SY53 40639378

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).