SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    105001 2ra3:A (1.46) BS01 CA 3.4.21.4 GO:0004252 ... P07477 18077447
    105002 2ra3:B (1.46) BS01 CA 3.4.21.4 GO:0004252 ... P07477 18077447
    105003 2ra4:B (1.7) BS01 TFA ? GO:0005102 ... Q99616 18323622
    105004 2ra6:A (1.5) BS01 ZN ? GO:0005576 ... Q29147 17685895
    105005 2ra6:A (1.5) BS02 ETY ? GO:0005576 ... Q29147 17685895
    105006 2ra6:B (1.5) BS01 ZN ? GO:0005576 ... Q29147 17685895
    105007 2ra6:B (1.5) BS02 ETY ? GO:0005576 ... Q29147 17685895
    105008 2ra6:C (1.5) BS01 ZN ? GO:0005576 ... Q29147 17685895
    105009 2ra6:C (1.5) BS02 ETY ? GO:0005576 ... Q29147 17685895
    105010 2ra6:D (1.5) BS01 ZN ? GO:0005576 ... Q29147 17685895
    105011 2ra6:D (1.5) BS02 ETY ? GO:0005576 ... Q29147 17685895
    105012 2rab:A (2.5) BS01 FAD 1.8.1.16 GO:0004362 ... D0VWY5 17977556
    105013 2rab:A (2.5) BS02 NAD 1.8.1.16 GO:0004362 ... D0VWY5 17977556
    105014 2rab:B (2.5) BS01 FAD 1.8.1.16 GO:0004362 ... D0VWY5 17977556
    105015 2rab:B (2.5) BS02 NAD 1.8.1.16 GO:0004362 ... D0VWY5 17977556
    105016 2rac:A (1.3) BS01 CU1 ? GO:0005507 ... P22364 9860825
    105017 2raf:A (1.6) BS01 NAP 1.-.-.- N/A F9URQ8 N/A
    105018 2rag:A (2.0) BS01 ZN ? GO:0006508 ... Q9A4T4 N/A
    105019 2rag:A (2.0) BS02 ZN ? GO:0006508 ... Q9A4T4 N/A
    105020 2rag:B (2.0) BS01 ZN ? GO:0006508 ... Q9A4T4 N/A
    105021 2rag:B (2.0) BS02 ZN ? GO:0006508 ... Q9A4T4 N/A
    105022 2rag:C (2.0) BS01 ZN ? GO:0006508 ... Q9A4T4 N/A
    105023 2rag:C (2.0) BS02 ZN ? GO:0006508 ... Q9A4T4 N/A
    105024 2rag:D (2.0) BS01 ZN ? GO:0006508 ... Q9A4T4 N/A
    105025 2rag:D (2.0) BS02 ZN ? GO:0006508 ... Q9A4T4 N/A
    105026 2rah:A (2.0) BS01 11P 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 N/A BindingDB: IC50=629.5nM
    105027 2rak:A (3.0) BS01 PIB ? GO:0000281 ... Q9Y5X1 17948057
    105028 2ram:A (2.4) BS01 dna ? GO:0003677 ... Q04207 9437432
    105029 2ram:A (2.4) BS02 dna ? GO:0003677 ... Q04207 9437432
    105030 2ram:B (2.4) BS01 dna ? GO:0003677 ... Q04207 9437432
    105031 2ran:A (1.89) BS01 CA ? GO:0001786 ... P14668 8362244
    105032 2ran:A (1.89) BS02 CA ? GO:0001786 ... P14668 8362244
    105033 2ran:A (1.89) BS03 CA ? GO:0001786 ... P14668 8362244
    105034 2ran:A (1.89) BS04 CA ? GO:0001786 ... P14668 8362244
    105035 2ran:A (1.89) BS05 CA ? GO:0001786 ... P14668 8362244
    105036 2ran:A (1.89) BS06 CA ? GO:0001786 ... P14668 8362244
    105037 2ran:A (1.89) BS07 CA ? GO:0001786 ... P14668 8362244
    105038 2rao:A (2.0) BS01 HEM ? GO:0004601 ... P01948 N/A
    105039 2rao:B (2.0) BS01 HEM ? GO:0004601 ... P02057 N/A
    105040 2rao:C (2.0) BS01 HEM ? GO:0004601 ... P01948 N/A
    105041 2rao:D (2.0) BS01 OXY ? GO:0004601 ... P02057 N/A
    105042 2rao:D (2.0) BS02 HEM ? GO:0004601 ... P02057 N/A
    105043 2rap:A (2.6) BS01 MG 3.6.5.2 GO:0000287 ... P10114 9312017
    105044 2rap:A (2.6) BS02 GTP 3.6.5.2 GO:0000287 ... P10114 9312017
    105045 2raq:A (3.11) BS01 CA ? N/A O26975 N/A
    105046 2raq:A (3.11) BS02 CA ? N/A O26975 N/A
    105047 2raq:B (3.11) BS01 CA ? N/A O26975 N/A
    105048 2raq:B (3.11) BS02 CA ? N/A O26975 N/A
    105049 2raq:E (3.11) BS01 CA ? N/A O26975 N/A
    105050 2raq:E (3.11) BS02 CA ? N/A O26975 N/A
    105051 2raq:F (3.11) BS01 CA ? N/A O26975 N/A
    105052 2rar:A (1.52) BS01 MG ? GO:0000287 ... Q8A090 18398008
    105053 2rar:A (1.52) BS02 VN4 ? GO:0000287 ... Q8A090 18398008 MOAD: Ki=700uM
    105054 2rau:A (1.85) BS01 CA ? GO:0016020 ... Q97VU1 N/A
    105055 2rau:A (1.85) BS02 CA ? GO:0016020 ... Q97VU1 N/A
    105056 2rau:A (1.85) BS03 CA ? GO:0016020 ... Q97VU1 N/A
    105057 2rav:A (1.07) BS01 MG ? GO:0000287 ... Q8A090 18398008
    105058 2rav:A (1.07) BS02 WO6 ? GO:0000287 ... Q8A090 18398008 MOAD: Ki=26uM
    105059 2raw:A (2.4) BS01 ZN ? GO:0000228 ... O15392 17881355
    105060 2rax:A (3.3) BS01 ZN ? N/A O15392 17881355
    105061 2rax:E (3.3) BS01 ZN ? N/A O15392 17881355
    105062 2rax:X (3.3) BS01 ZN ? N/A O15392 17881355
    105063 2ray:X (1.798) BS01 258 3.2.1.17 GO:0003796 ... P00720 18280498
    105064 2raz:X (1.641) BS01 259 3.2.1.17 GO:0003796 ... P00720 18280498
    105065 2rb0:X (1.84) BS01 260 3.2.1.17 GO:0003796 ... P00720 18280498
    105066 2rb1:X (1.7) BS01 261 3.2.1.17 GO:0003796 ... P00720 18280498
    105067 2rb1:X (1.7) BS02 261 3.2.1.17 GO:0003796 ... P00720 18280498
    105068 2rb2:X (1.463) BS01 263 3.2.1.17 GO:0003796 ... P00720 18280498
    105069 2rb4:A (2.8) BS01 ZN 3.6.4.13 N/A Q9UHL0 20941364
    105070 2rb5:A (1.03) BS01 MG ? GO:0000287 ... Q8A090 18398008
    105071 2rb5:A (1.03) BS02 WO6 ? GO:0000287 ... Q8A090 18398008 MOAD: Ki=65uM
    105072 2rba:A (2.79) BS01 dna 3.2.2.29 GO:0000700 ... Q13569 18587051
    105073 2rba:A (2.79) BS02 dna 3.2.2.29 GO:0000700 ... Q13569 18587051
    105074 2rba:B (2.79) BS01 dna 3.2.2.29 GO:0000700 ... Q13569 18587051
    105075 2rba:B (2.79) BS02 dna 3.2.2.29 GO:0000700 ... Q13569 18587051
    105076 2rbe:A (1.9) BS01 ZMG 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 17919905 MOAD: Ki=17nM
    105077 2rbe:A (1.9) BS02 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 17919905
    105078 2rbe:B (1.9) BS01 ZMG 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 17919905 MOAD: Ki=17nM
    105079 2rbe:B (1.9) BS02 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 17919905
    105080 2rbe:C (1.9) BS01 ZMG 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 17919905 MOAD: Ki=17nM
    105081 2rbe:C (1.9) BS02 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 17919905
    105082 2rbe:D (1.9) BS01 ZMG 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 17919905 MOAD: Ki=17nM
    105083 2rbe:D (1.9) BS02 NDP 1.1.1.146
    1.1.1.201
    GO:0005496 ... P28845 17919905
    105084 2rbf:A (2.25) BS01 dna 1.2.1.88
    1.5.5.2
    GO:0006355 ... P09546 18586269
    105085 2rbf:A (2.25) BS02 dna 1.2.1.88
    1.5.5.2
    GO:0006355 ... P09546 18586269
    105086 2rbf:B (2.25) BS01 dna 1.2.1.88
    1.5.5.2
    GO:0006355 ... P09546 18586269
    105087 2rbf:B (2.25) BS02 dna 1.2.1.88
    1.5.5.2
    GO:0006355 ... P09546 18586269
    105088 2rbk:A (1.0) BS01 MG ? GO:0000287 ... Q8A090 18398008
    105089 2rbk:A (1.0) BS02 VN4 ? GO:0000287 ... Q8A090 18398008 MOAD: Ki=510nM
    105090 2rbm:A (1.9) BS01 CA 3.1.31.1 GO:0003676 ... P00644 N/A
    105091 2rbm:A (1.9) BS02 THP 3.1.31.1 GO:0003676 ... P00644 N/A
    105092 2rbn:A (1.29) BS01 264 3.2.1.17 GO:0003796 ... P00720 18280498
    105093 2rbo:A (1.29) BS01 265 3.2.1.17 GO:0003796 ... P00720 18280498
    105094 2rbp:A (1.467) BS01 266 3.2.1.17 GO:0003796 ... P00720 18280498
    105095 2rbq:A (1.633) BS01 263 3.2.1.17 GO:0003796 ... P00720 18280498
    105096 2rbr:A (1.433) BS01 268 3.2.1.17 GO:0003796 ... P00720 18280498
    105097 2rbs:A (1.557) BS01 269 3.2.1.17 GO:0003796 ... P00720 18280498
    105098 2rbt:X (1.24) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 18280498
    105099 2rbt:X (1.24) BS02 271 1.11.1.5 GO:0004601 ... P00431 18280498
    105100 2rbu:X (1.8) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 18280498
    105101 2rbu:X (1.8) BS02 273 1.11.1.5 GO:0004601 ... P00431 18280498
    105102 2rbv:X (1.39) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 18280498
    105103 2rbv:X (1.39) BS02 278 1.11.1.5 GO:0004601 ... P00431 18280498
    105104 2rbw:X (1.5) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 18280498
    105105 2rbw:X (1.5) BS02 275 1.11.1.5 GO:0004601 ... P00431 18280498
    105106 2rbx:X (1.5) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 18280498
    105107 2rbx:X (1.5) BS02 3AY 1.11.1.5 GO:0004601 ... P00431 18280498
    105108 2rby:X (1.5) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 18280498
    105109 2rby:X (1.5) BS02 280 1.11.1.5 GO:0004601 ... P00431 18280498
    105110 2rbz:X (1.8) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 18280498
    105111 2rbz:X (1.8) BS02 282 1.11.1.5 GO:0004601 ... P00431 18280498
    105112 2rc0:X (1.5) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 18280498
    105113 2rc0:X (1.5) BS02 284 1.11.1.5 GO:0004601 ... P00431 18280498
    105114 2rc1:X (2.49) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 18280498
    105115 2rc1:X (2.49) BS02 285 1.11.1.5 GO:0004601 ... P00431 18280498
    105116 2rc2:X (1.5) BS01 HEM 1.11.1.5 GO:0004601 ... P00431 18280498
    105117 2rc2:X (1.5) BS02 286 1.11.1.5 GO:0004601 ... P00431 18280498
    105118 2rc3:A (1.6) BS01 NAD ? N/A Q82SE2 N/A
    105119 2rc3:A (1.6) BS02 NAD ? N/A Q82SE2 N/A
    105120 2rc3:B (1.6) BS01 NAD ? N/A Q82SE2 N/A
    105121 2rc3:B (1.6) BS02 NAD ? N/A Q82SE2 N/A
    105122 2rc3:C (1.6) BS01 NAD ? N/A Q82SE2 N/A
    105123 2rc3:C (1.6) BS02 NAD ? N/A Q82SE2 N/A
    105124 2rc3:D (1.6) BS01 NAD ? N/A Q82SE2 N/A
    105125 2rc3:D (1.6) BS02 NAD ? N/A Q82SE2 N/A
    105126 2rc4:A (3.0) BS01 ZN 2.3.1.48 GO:0004402 ... Q92794 17925393
    105127 2rc4:A (3.0) BS02 ACO 2.3.1.48 GO:0004402 ... Q92794 17925393
    105128 2rc5:A (2.431) BS01 ZN 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105129 2rc5:A (2.431) BS02 FAD 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105130 2rc5:B (2.431) BS01 FAD 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105131 2rc5:C (2.431) BS01 FAD 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105132 2rc5:D (2.431) BS01 FAD 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105133 2rc6:A (2.7) BS01 ZN 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105134 2rc6:A (2.7) BS02 FAD 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105135 2rc6:A (2.7) BS03 NAP 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105136 2rc6:B (2.7) BS01 FAD 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105137 2rc6:B (2.7) BS02 NAP 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105138 2rc6:C (2.7) BS01 FAD 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105139 2rc6:C (2.7) BS02 NAP 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105140 2rc6:D (2.7) BS01 FAD 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105141 2rc6:D (2.7) BS02 NAP 1.18.1.2 GO:0016491 ... Q8EY89 17958910
    105142 2rc7:A (1.58) BS01 GLY ? GO:0015276 ... Q9R1M7 18636091
    105143 2rc7:B (1.58) BS01 GLY ? GO:0015276 ... Q9R1M7 18636091
    105144 2rc8:A (1.45) BS01 DSN ? GO:0015276 ... Q9R1M7 18636091
    105145 2rc8:B (1.45) BS01 DSN ? GO:0015276 ... Q9R1M7 18636091
    105146 2rc9:A (1.96) BS01 1AC ? GO:0015276 ... Q9R1M7 18636091
    105147 2rc9:B (1.96) BS01 1AC ? GO:0015276 ... Q9R1M7 18636091
    105148 2rca:A (1.58) BS01 GLY ? GO:0015276 ... Q8VHN2 18636091 MOAD: Kd=16.4nM
    105149 2rca:B (1.58) BS01 GLY ? GO:0015276 ... Q8VHN2 18636091
    105150 2rcb:A (1.62) BS01 DSN ? GO:0015276 ... Q8VHN2 18636091
    105151 2rcb:B (1.62) BS01 DSN ? GO:0015276 ... Q8VHN2 18636091
    105152 2rcc:B (1.9) BS01 ZN 1.17.4.1 GO:0004748 ... Q9KFH7 N/A
    105153 2rcc:B (1.9) BS02 ZN 1.17.4.1 GO:0004748 ... Q9KFH7 N/A
    105154 2rcc:C (1.9) BS01 ZN 1.17.4.1 GO:0004748 ... Q9KFH7 N/A
    105155 2rcc:C (1.9) BS02 ZN 1.17.4.1 GO:0004748 ... Q9KFH7 N/A
    105156 2rch:A (1.85) BS01 HEM 4.2.1.92 GO:0004497 ... Q96242 18716621
    105157 2rch:A (1.85) BS02 243 4.2.1.92 GO:0004497 ... Q96242 18716621
    105158 2rch:B (1.85) BS01 HEM 4.2.1.92 GO:0004497 ... Q96242 18716621
    105159 2rcl:A (2.41) BS01 HEM 4.2.1.92 GO:0004497 ... Q96242 18716621
    105160 2rcl:A (2.41) BS02 T25 4.2.1.92 GO:0004497 ... Q96242 18716621
    105161 2rcl:B (2.41) BS01 HEM 4.2.1.92 GO:0004497 ... Q96242 18716621
    105162 2rcm:A (1.73) BS01 HEM 4.2.1.92 GO:0004497 ... Q96242 18716621
    105163 2rcm:B (1.73) BS01 HEM 4.2.1.92 GO:0004497 ... Q96242 18716621
    105164 2rcn:A (2.25) BS01 ZN 3.6.1.- GO:0000028 ... Q8ZKB0 18007041
    105165 2rcn:A (2.25) BS02 GDP 3.6.1.- GO:0000028 ... Q8ZKB0 18007041 MOAD: Kd=1uM
    105166 2rcr:L (3.1) BS01 BCL ? GO:0009772 ... P0C0Y8 2036404
    105167 2rcr:L (3.1) BS02 BCL ? GO:0009772 ... P0C0Y8 2036404
    105168 2rcr:L (3.1) BS03 BPH ? GO:0009772 ... P0C0Y8 2036404
    105169 2rcr:L (3.1) BS04 UQ ? GO:0009772 ... P0C0Y8 2036404
    105170 2rcr:L (3.1) BS05 FE ? GO:0009772 ... P0C0Y8 2036404
    105171 2rcr:L (3.1) BS06 BCL ? GO:0009772 ... P0C0Y8 2036404
    105172 2rcr:L (3.1) BS07 BPH ? GO:0009772 ... P0C0Y8 2036404
    105173 2rcr:M (3.1) BS01 BCL ? GO:0009772 ... P0C0Y9 2036404
    105174 2rcr:M (3.1) BS02 BPH ? GO:0009772 ... P0C0Y9 2036404
    105175 2rcr:M (3.1) BS03 UQ ? GO:0009772 ... P0C0Y9 2036404
    105176 2rcr:M (3.1) BS04 FE ? GO:0009772 ... P0C0Y9 2036404
    105177 2rcr:M (3.1) BS05 BCL ? GO:0009772 ... P0C0Y9 2036404
    105178 2rcr:M (3.1) BS06 BCL ? GO:0009772 ... P0C0Y9 2036404
    105179 2rcr:M (3.1) BS07 BPH ? GO:0009772 ... P0C0Y9 2036404
    105180 2rcr:M (3.1) BS08 UQ ? GO:0009772 ... P0C0Y9 2036404
    105181 2rct:A (1.2) BS01 RTL ? GO:0001523 ... P50120 18076076
    105182 2rcu:A (1.78) BS01 BUJ 2.3.1.21 GO:0001676 ... P18886 17585909 MOAD: ic50=210nM
    105183 2rcu:B (1.78) BS01 BUJ 2.3.1.21 GO:0001676 ... P18886 17585909 MOAD: ic50=210nM
    105184 2rcv:A (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P54375 18084079
    105185 2rcv:B (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P54375 18084079
    105186 2rcv:C (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P54375 18084079
    105187 2rcv:D (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P54375 18084079
    105188 2rcv:E (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P54375 18084079
    105189 2rcv:F (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P54375 18084079
    105190 2rcv:G (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P54375 18084079
    105191 2rcv:H (1.6) BS01 MN 1.15.1.1 GO:0004784 ... P54375 18084079
    105192 2rcw:A (2.8) BS01 AAI 2.4.2.-
    2.4.2.30
    GO:0003950 ... P09874 N/A BindingDB: Ki=8nM, EC50=3nM
    105193 2rcx:A (2.0) BS01 SM4 3.5.2.6 GO:0008800 ... P00811 17997318
    105194 2rcx:B (2.0) BS01 SM4 3.5.2.6 GO:0008800 ... P00811 17997318
    105195 2rcy:A (2.3) BS01 NAP 1.5.1.2 GO:0004735 ... Q8IDC6 N/A
    105196 2rcy:A (2.3) BS02 NAP 1.5.1.2 GO:0004735 ... Q8IDC6 N/A
    105197 2rcy:B (2.3) BS01 NAP 1.5.1.2 GO:0004735 ... Q8IDC6 N/A
    105198 2rcy:B (2.3) BS02 NAP 1.5.1.2 GO:0004735 ... Q8IDC6 N/A
    105199 2rcy:C (2.3) BS01 NAP 1.5.1.2 GO:0004735 ... Q8IDC6 N/A
    105200 2rcy:C (2.3) BS02 NAP 1.5.1.2 GO:0004735 ... Q8IDC6 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).