SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1052801 9r3a:O (2.86) BS01 rna N/A GO:0000028 ... P0ADZ4 41558483
    1052802 9r3a:P (2.86) BS01 rna N/A GO:0000028 ... P0A7T3 41558483
    1052803 9r3a:Q (2.86) BS01 rna N/A GO:0000028 ... P0AG63 41558483
    1052804 9r3a:R (2.86) BS01 rna N/A GO:0002181 ... P0A7T7 41558483
    1052805 9r3a:S (2.86) BS01 rna N/A GO:0002181 ... P0A7U3 41558483
    1052806 9r3a:T (2.86) BS01 rna N/A GO:0000028 ... P0A7U7 41558483
    1052807 9r3a:U (2.86) BS01 rna N/A GO:0000028 ... P68679 41558483
    1052808 9r3a:V (2.86) BS01 rna N/A GO:0000028 ... P0A7V0 41558483
    1052809 9r3a:c (2.86) BS01 rna N/A GO:0000027 ... P60422 41558483
    1052810 9r3a:d (2.86) BS01 rna N/A GO:0000027 ... P60438 41558483
    1052811 9r3a:e (2.86) BS01 rna N/A GO:0001070 ... P60723 41558483
    1052812 9r3a:f (2.86) BS01 rna N/A GO:0000027 ... P62399 41558483
    1052813 9r3a:f (2.86) BS02 rna N/A GO:0000027 ... P62399 41558483
    1052814 9r3a:f (2.86) BS03 rna N/A GO:0000027 ... P62399 41558483
    1052815 9r3a:g (2.86) BS01 rna N/A GO:0000027 ... P0AG55 41558483
    1052816 9r3a:h (2.86) BS01 rna N/A GO:0002181 ... P0A7R1 41558483
    1052817 9r3a:i (2.86) BS01 rna N/A GO:0002181 ... P0AA10 41558483
    1052818 9r3a:j (2.86) BS01 rna N/A GO:0002181 ... P0ADY3 41558483
    1052819 9r3a:k (2.86) BS01 rna N/A GO:0002181 ... P02413 41558483
    1052820 9r3a:l (2.86) BS01 rna N/A GO:0000027 ... P0ADY7 41558483
    1052821 9r3a:m (2.86) BS01 rna N/A GO:0000027 ... P0AG44 41558483
    1052822 9r3a:n (2.86) BS01 rna N/A GO:0002181 ... P0C018 41558483
    1052823 9r3a:n (2.86) BS02 rna N/A GO:0002181 ... P0C018 41558483
    1052824 9r3a:o (2.86) BS01 rna N/A GO:0000027 ... P0A7K6 41558483
    1052825 9r3a:o (2.86) BS02 rna N/A GO:0000027 ... P0A7K6 41558483
    1052826 9r3a:p (2.86) BS01 rna N/A GO:0000027 ... P0A7L3 41558483
    1052827 9r3a:q (2.86) BS01 rna N/A GO:0002181 ... P0AG48 41558483
    1052828 9r3a:r (2.86) BS01 rna N/A GO:0002181 ... P61175 41558483
    1052829 9r3a:s (2.86) BS01 rna N/A GO:0000027 ... P0ADZ0 41558483
    1052830 9r3a:t (2.86) BS01 rna N/A GO:0000027 ... P60624 41558483
    1052831 9r3a:u (2.86) BS01 rna N/A GO:0000027 ... P68919 41558483
    1052832 9r3a:v (2.86) BS01 rna N/A GO:0000027 ... P0A7L8 41558483
    1052833 9r3a:w (2.86) BS01 rna N/A GO:0000027 ... P0A7M2 41558483
    1052834 9r3a:x (2.86) BS01 rna N/A GO:0000027 ... P0A7M6 41558483
    1052835 9r3a:y (2.86) BS01 rna N/A GO:0000027 ... P0AG51 41558483
    1052836 9r3a:z (2.86) BS01 rna N/A GO:0000027 ... P0A7N4 41558483
    1052837 9r3b:A (2.15) BS01 FUC N/A GO:0001540 ... P06276 40712769
    1052838 9r3b:A (2.15) BS02 FUC N/A GO:0001540 ... P06276 40712769
    1052839 9r3b:A (2.15) BS03 A1JC3 N/A GO:0001540 ... P06276 40712769
    1052840 9r3c:A (2.31) BS01 FUC N/A GO:0001540 ... P06276 40712769
    1052841 9r3c:A (2.31) BS02 FUC N/A GO:0001540 ... P06276 40712769
    1052842 9r3c:A (2.31) BS03 5HF N/A GO:0001540 ... P06276 40712769
    1052843 9r3h:A (2.1) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052844 9r3h:A (2.1) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052845 9r3h:A (2.1) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052846 9r3h:A (2.1) BS04 A1JB3 N/A GO:0000287 ... P30613 40749256
    1052847 9r3h:B (2.1) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052848 9r3h:B (2.1) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052849 9r3h:B (2.1) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052850 9r3h:B (2.1) BS04 A1JB3 N/A GO:0000287 ... P30613 40749256
    1052851 9r3h:C (2.1) BS01 A1JB3 N/A GO:0000287 ... P30613 40749256
    1052852 9r3h:C (2.1) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052853 9r3h:C (2.1) BS03 OXL N/A GO:0000287 ... P30613 40749256
    1052854 9r3h:C (2.1) BS04 MG N/A GO:0000287 ... P30613 40749256
    1052855 9r3h:D (2.1) BS01 A1JB3 N/A GO:0000287 ... P30613 40749256
    1052856 9r3h:D (2.1) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052857 9r3h:D (2.1) BS03 OXL N/A GO:0000287 ... P30613 40749256
    1052858 9r3h:D (2.1) BS04 MG N/A GO:0000287 ... P30613 40749256
    1052859 9r3h:E (2.1) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052860 9r3h:E (2.1) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052861 9r3h:E (2.1) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052862 9r3h:E (2.1) BS04 A1JB3 N/A GO:0000287 ... P30613 40749256
    1052863 9r3h:F (2.1) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052864 9r3h:F (2.1) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052865 9r3h:F (2.1) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052866 9r3h:F (2.1) BS04 A1JB3 N/A GO:0000287 ... P30613 40749256
    1052867 9r3h:G (2.1) BS01 A1JB3 N/A GO:0000287 ... P30613 40749256
    1052868 9r3h:G (2.1) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052869 9r3h:G (2.1) BS03 OXL N/A GO:0000287 ... P30613 40749256
    1052870 9r3h:G (2.1) BS04 MG N/A GO:0000287 ... P30613 40749256
    1052871 9r3h:H (2.1) BS01 A1JB3 N/A GO:0000287 ... P30613 40749256
    1052872 9r3h:H (2.1) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052873 9r3h:H (2.1) BS03 OXL N/A GO:0000287 ... P30613 40749256
    1052874 9r3h:H (2.1) BS04 MG N/A GO:0000287 ... P30613 40749256
    1052875 9r3i:A (2.579) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052876 9r3i:A (2.579) BS02 A1JB2 N/A GO:0000287 ... P30613 40749256
    1052877 9r3i:B (2.579) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052878 9r3i:B (2.579) BS02 A1JB2 N/A GO:0000287 ... P30613 40749256
    1052879 9r3i:C (2.579) BS01 A1JB2 N/A GO:0000287 ... P30613 40749256
    1052880 9r3i:C (2.579) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052881 9r3i:D (2.579) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052882 9r3i:D (2.579) BS02 A1JB2 N/A GO:0000287 ... P30613 40749256
    1052883 9r3j:AAA (1.7) BS01 FAD N/A GO:0005515 ... P27338 40738081
    1052884 9r3j:AAA (1.7) BS02 C15 N/A GO:0005515 ... P27338 40738081
    1052885 9r3j:AAA (1.7) BS03 A1JC8 N/A GO:0005515 ... P27338 40738081
    1052886 9r3j:BBB (1.7) BS01 FAD N/A GO:0005515 ... P27338 40738081
    1052887 9r3j:BBB (1.7) BS02 C15 N/A GO:0005515 ... P27338 40738081
    1052888 9r3j:BBB (1.7) BS03 A1JC8 N/A GO:0005515 ... P27338 40738081
    1052889 9r3k:AAA (1.6) BS01 FAD N/A GO:0005515 ... P27338 40738081
    1052890 9r3k:AAA (1.6) BS02 A1JC6 N/A GO:0005515 ... P27338 40738081
    1052891 9r3k:AAA (1.6) BS03 C15 N/A GO:0005515 ... P27338 40738081
    1052892 9r3k:BBB (1.6) BS01 FAD N/A GO:0005515 ... P27338 40738081
    1052893 9r3k:BBB (1.6) BS02 A1JC6 N/A GO:0005515 ... P27338 40738081
    1052894 9r3k:BBB (1.6) BS03 C15 N/A GO:0005515 ... P27338 40738081
    1052895 9r3l:A (2.158) BS01 OXL N/A GO:0000287 ... P30613 40749256
    1052896 9r3l:A (2.158) BS02 A1JB0 N/A GO:0000287 ... P30613 40749256
    1052897 9r3l:A (2.158) BS03 FBP N/A GO:0000287 ... P30613 40749256
    1052898 9r3l:A (2.158) BS04 MG N/A GO:0000287 ... P30613 40749256
    1052899 9r3l:B (2.158) BS01 OXL N/A GO:0000287 ... P30613 40749256
    1052900 9r3l:B (2.158) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052901 9r3l:B (2.158) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052902 9r3l:B (2.158) BS04 A1JB0 N/A GO:0000287 ... P30613 40749256
    1052903 9r3l:C (2.158) BS01 OXL N/A GO:0000287 ... P30613 40749256
    1052904 9r3l:C (2.158) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052905 9r3l:C (2.158) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052906 9r3l:C (2.158) BS04 A1JB0 N/A GO:0000287 ... P30613 40749256
    1052907 9r3l:D (2.158) BS01 OXL N/A GO:0000287 ... P30613 40749256
    1052908 9r3l:D (2.158) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052909 9r3l:D (2.158) BS03 A1JB0 N/A GO:0000287 ... P30613 40749256
    1052910 9r3l:E (2.158) BS01 A1JB0 N/A GO:0000287 ... P30613 40749256
    1052911 9r3l:E (2.158) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052912 9r3l:E (2.158) BS03 FBP N/A GO:0000287 ... P30613 40749256
    1052913 9r3l:E (2.158) BS04 MG N/A GO:0000287 ... P30613 40749256
    1052914 9r3l:F (2.158) BS01 OXL N/A GO:0000287 ... P30613 40749256
    1052915 9r3l:F (2.158) BS02 A1JB0 N/A GO:0000287 ... P30613 40749256
    1052916 9r3l:F (2.158) BS03 FBP N/A GO:0000287 ... P30613 40749256
    1052917 9r3l:G (2.158) BS01 A1JB0 N/A GO:0000287 ... P30613 40749256
    1052918 9r3l:G (2.158) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052919 9r3l:G (2.158) BS03 FBP N/A GO:0000287 ... P30613 40749256
    1052920 9r3l:G (2.158) BS04 MG N/A GO:0000287 ... P30613 40749256
    1052921 9r3l:H (2.158) BS01 A1JB0 N/A GO:0000287 ... P30613 40749256
    1052922 9r3l:H (2.158) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052923 9r3l:H (2.158) BS03 FBP N/A GO:0000287 ... P30613 40749256
    1052924 9r3m:A (2.062) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052925 9r3m:A (2.062) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052926 9r3m:A (2.062) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052927 9r3m:A (2.062) BS04 A1JBZ N/A GO:0000287 ... P30613 40749256
    1052928 9r3m:B (2.062) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052929 9r3m:B (2.062) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052930 9r3m:B (2.062) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052931 9r3m:B (2.062) BS04 A1JBZ N/A GO:0000287 ... P30613 40749256
    1052932 9r3m:C (2.062) BS01 A1JBZ N/A GO:0000287 ... P30613 40749256
    1052933 9r3m:C (2.062) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052934 9r3m:C (2.062) BS03 OXL N/A GO:0000287 ... P30613 40749256
    1052935 9r3m:C (2.062) BS04 MG N/A GO:0000287 ... P30613 40749256
    1052936 9r3m:D (2.062) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052937 9r3m:D (2.062) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052938 9r3m:D (2.062) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052939 9r3m:D (2.062) BS04 A1JBZ N/A GO:0000287 ... P30613 40749256
    1052940 9r3m:E (2.062) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052941 9r3m:E (2.062) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052942 9r3m:E (2.062) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052943 9r3m:E (2.062) BS04 A1JBZ N/A GO:0000287 ... P30613 40749256
    1052944 9r3m:F (2.062) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052945 9r3m:F (2.062) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052946 9r3m:F (2.062) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052947 9r3m:F (2.062) BS04 A1JBZ N/A GO:0000287 ... P30613 40749256
    1052948 9r3m:G (2.062) BS01 A1JBZ N/A GO:0000287 ... P30613 40749256
    1052949 9r3m:G (2.062) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052950 9r3m:G (2.062) BS03 OXL N/A GO:0000287 ... P30613 40749256
    1052951 9r3m:G (2.062) BS04 MG N/A GO:0000287 ... P30613 40749256
    1052952 9r3m:H (2.062) BS01 A1JBZ N/A GO:0000287 ... P30613 40749256
    1052953 9r3m:H (2.062) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052954 9r3m:H (2.062) BS03 OXL N/A GO:0000287 ... P30613 40749256
    1052955 9r3m:H (2.062) BS04 MG N/A GO:0000287 ... P30613 40749256
    1052956 9r3o:A (2.045) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052957 9r3o:A (2.045) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052958 9r3o:A (2.045) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052959 9r3o:A (2.045) BS04 A1JBW N/A GO:0000287 ... P30613 40749256
    1052960 9r3o:B (2.045) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052961 9r3o:B (2.045) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052962 9r3o:B (2.045) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052963 9r3o:B (2.045) BS04 A1JBW N/A GO:0000287 ... P30613 40749256
    1052964 9r3o:C (2.045) BS01 A1JBW N/A GO:0000287 ... P30613 40749256
    1052965 9r3o:C (2.045) BS02 FBP N/A GO:0000287 ... P30613 40749256
    1052966 9r3o:C (2.045) BS03 OXL N/A GO:0000287 ... P30613 40749256
    1052967 9r3o:C (2.045) BS04 MG N/A GO:0000287 ... P30613 40749256
    1052968 9r3o:D (2.045) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052969 9r3o:D (2.045) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052970 9r3o:D (2.045) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052971 9r3o:D (2.045) BS04 A1JBW N/A GO:0000287 ... P30613 40749256
    1052972 9r3o:E (2.045) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052973 9r3o:E (2.045) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052974 9r3o:E (2.045) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052975 9r3o:E (2.045) BS04 A1JBW N/A GO:0000287 ... P30613 40749256
    1052976 9r3o:F (2.045) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052977 9r3o:F (2.045) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052978 9r3o:F (2.045) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052979 9r3o:F (2.045) BS04 A1JBW N/A GO:0000287 ... P30613 40749256
    1052980 9r3o:G (2.045) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052981 9r3o:G (2.045) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052982 9r3o:G (2.045) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052983 9r3o:G (2.045) BS04 A1JBW N/A GO:0000287 ... P30613 40749256
    1052984 9r3o:H (2.045) BS01 FBP N/A GO:0000287 ... P30613 40749256
    1052985 9r3o:H (2.045) BS02 OXL N/A GO:0000287 ... P30613 40749256
    1052986 9r3o:H (2.045) BS03 MG N/A GO:0000287 ... P30613 40749256
    1052987 9r3o:H (2.045) BS04 A1JBW N/A GO:0000287 ... P30613 40749256
    1052988 9r3w:A (1.89) BS01 GDP N/A GO:0003972 ... G0S6G2 40983467
    1052989 9r3w:A (1.89) BS02 APC N/A GO:0003972 ... G0S6G2 40983467
    1052990 9r40:A (2.043) BS01 A1JC1 N/A GO:0003824 ... P0A3G3 N/A
    1052991 9r43:A (2.1) BS01 FAD N/A N/A P43485 N/A
    1052992 9r43:B (2.1) BS01 FAD N/A N/A P43485 N/A
    1052993 9r45:A (1.79) BS01 MN N/A GO:0000287 ... P24300 41266557
    1052994 9r46:A (2.1) BS01 MG N/A GO:0000287 ... P24300 41266557
    1052995 9r46:A (2.1) BS02 MN N/A GO:0000287 ... P24300 41266557
    1052996 9r46:A (2.1) BS03 BGC N/A GO:0000287 ... P24300 41266557
    1052997 9r47:A (1.8) BS01 MG N/A GO:0000287 ... P24300 41266557
    1052998 9r47:A (1.8) BS02 MN N/A GO:0000287 ... P24300 41266557
    1052999 9r47:A (1.8) BS03 BGC N/A GO:0000287 ... P24300 41266557
    1053000 9r48:B (1.65) BS01 peptide N/A N/A P01308 41266557

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).