SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1053001 9r49:B (1.641) BS01 peptide N/A N/A P01308 41266557
    1053002 9r4a:B (1.45) BS01 peptide N/A N/A P01308 41266557
    1053003 9r4b:B (1.5) BS01 peptide N/A N/A P01308 41266557
    1053004 9r4c:B (1.41) BS01 peptide N/A N/A P01308 41266557
    1053005 9r4e:B (1.3) BS01 peptide N/A N/A P01308 41266557
    1053006 9r4g:A (1.9) BS01 IND N/A GO:0003796 ... A0A7S9SVX7 41266557
    1053007 9r4h:A (1.49) BS01 IND N/A GO:0003796 ... A0A7S9SVX7 41266557
    1053008 9r4i:A (2.92) BS01 IHP N/A GO:0000118 ... Q13547 41290615
    1053009 9r4i:A (2.92) BS02 ZN N/A GO:0000118 ... Q13547 41290615
    1053010 9r4i:B (2.92) BS01 IHP N/A N/A Q6PJG2 41290615
    1053011 9r4i:D (2.92) BS01 ZN N/A GO:0000118 ... Q13547 41290615
    1053012 9r4i:D (2.92) BS02 IHP N/A GO:0000118 ... Q13547 41290615
    1053013 9r4i:E (2.92) BS01 IHP N/A N/A Q6PJG2 41290615
    1053014 9r4j:A (3.36) BS01 dna N/A GO:0000976 ... P47463 41611686
    1053015 9r4j:B (3.36) BS01 dna N/A GO:0000976 ... P47463 41611686
    1053016 9r4j:B (3.36) BS02 dna N/A GO:0000976 ... P47463 41611686
    1053017 9r4j:C (3.36) BS01 dna N/A GO:0000976 ... P47463 41611686
    1053018 9r4j:C (3.36) BS02 dna N/A GO:0000976 ... P47463 41611686
    1053019 9r4j:D (3.36) BS01 dna N/A GO:0000976 ... P47463 41611686
    1053020 9r4l:A (2.1) BS01 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053021 9r4l:A (2.1) BS02 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053022 9r4l:A (2.1) BS03 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053023 9r4m:A (1.95) BS01 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053024 9r4m:A (1.95) BS02 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053025 9r4m:A (1.95) BS03 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053026 9r4n:A (2.55) BS01 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053027 9r4o:A (2.13) BS01 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053028 9r4o:A (2.13) BS02 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053029 9r4o:A (2.13) BS03 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053030 9r4p:A (2.46) BS01 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053031 9r4p:A (2.46) BS02 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053032 9r4p:A (2.46) BS03 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053033 9r4q:A (2.7) BS01 MAN N/A GO:0005975 ... G0S5Y9 40724838
    1053034 9r4r:A (2.35) BS01 PA1 N/A GO:0005975 ... G0S5Y9 40724838
    1053035 9r4s:A (2.2) BS01 BGC N/A GO:0005975 ... G0S5Y9 40724838
    1053036 9r4s:A (2.2) BS02 BGC N/A GO:0005975 ... G0S5Y9 40724838
    1053037 9r4s:A (2.2) BS03 BGC N/A GO:0005975 ... G0S5Y9 40724838
    1053038 9r4s:A (2.2) BS04 BGC N/A GO:0005975 ... G0S5Y9 40724838
    1053039 9r4s:A (2.2) BS05 BGC N/A GO:0005975 ... G0S5Y9 40724838
    1053040 9r4t:A (2.3) BS01 BGC N/A GO:0005975 ... G0S5Y9 40724838
    1053041 9r4t:A (2.3) BS02 BGC N/A GO:0005975 ... G0S5Y9 40724838
    1053042 9r4t:A (2.3) BS03 BGC N/A GO:0005975 ... G0S5Y9 40724838
    1053043 9r4u:A (1.96) BS01 BGC N/A GO:0005975 ... G0S5Y9 40724838
    1053044 9r4u:A (1.96) BS02 BGC N/A GO:0005975 ... G0S5Y9 40724838
    1053045 9r4u:A (1.96) BS03 BGC N/A GO:0005975 ... G0S5Y9 40724838
    1053046 9r4x:A (3.2) BS01 GTP N/A N/A N/A 41786731
    1053047 9r4x:A (3.2) BS02 MG N/A N/A N/A 41786731
    1053048 9r4x:B (3.2) BS01 GDP N/A N/A N/A 41786731
    1053049 9r4x:B (3.2) BS02 TA1 N/A N/A N/A 41786731
    1053050 9r4y:A (2.9) BS01 GTP N/A N/A N/A 41786731
    1053051 9r4y:B (2.9) BS01 G2P N/A N/A N/A 41786731
    1053052 9r51:A (2.3) BS01 NFU N/A GO:0008901 ... Q60338 41078086
    1053053 9r51:A (2.3) BS02 FE N/A GO:0008901 ... Q60338 41078086
    1053054 9r51:A (2.3) BS03 SF4 N/A GO:0008901 ... Q60338 41078086
    1053055 9r51:B (2.3) BS01 SF4 N/A GO:0016151 ... Q60341 41078086
    1053056 9r51:B (2.3) BS02 FAD N/A GO:0016151 ... Q60341 41078086
    1053057 9r51:C (2.3) BS01 SF4 N/A GO:0016151 ... Q60340 41078086
    1053058 9r51:C (2.3) BS02 SF4 N/A GO:0016151 ... Q60340 41078086
    1053059 9r51:C (2.3) BS03 SF4 N/A GO:0016151 ... Q60340 41078086
    1053060 9r51:D (2.3) BS01 NFU N/A GO:0008901 ... Q60338 41078086
    1053061 9r51:D (2.3) BS02 FE N/A GO:0008901 ... Q60338 41078086
    1053062 9r51:E (2.3) BS01 SF4 N/A GO:0016151 ... Q60340 41078086
    1053063 9r51:E (2.3) BS02 SF4 N/A GO:0016151 ... Q60340 41078086
    1053064 9r51:E (2.3) BS03 SF4 N/A GO:0016151 ... Q60340 41078086
    1053065 9r51:F (2.3) BS01 SF4 N/A GO:0016151 ... Q60341 41078086
    1053066 9r51:F (2.3) BS02 FAD N/A GO:0016151 ... Q60341 41078086
    1053067 9r51:G (2.3) BS01 NFU N/A GO:0008901 ... Q60338 41078086
    1053068 9r51:G (2.3) BS02 FE N/A GO:0008901 ... Q60338 41078086
    1053069 9r51:H (2.3) BS01 SF4 N/A GO:0016151 ... Q60340 41078086
    1053070 9r51:H (2.3) BS02 SF4 N/A GO:0016151 ... Q60340 41078086
    1053071 9r51:H (2.3) BS03 SF4 N/A GO:0016151 ... Q60340 41078086
    1053072 9r51:I (2.3) BS01 SF4 N/A GO:0016151 ... Q60341 41078086
    1053073 9r51:I (2.3) BS02 FAD N/A GO:0016151 ... Q60341 41078086
    1053074 9r51:J (2.3) BS01 NFU N/A GO:0008901 ... Q60338 41078086
    1053075 9r51:J (2.3) BS02 FE N/A GO:0008901 ... Q60338 41078086
    1053076 9r51:K (2.3) BS01 SF4 N/A GO:0016151 ... Q60340 41078086
    1053077 9r51:K (2.3) BS02 SF4 N/A GO:0016151 ... Q60340 41078086
    1053078 9r51:K (2.3) BS03 SF4 N/A GO:0016151 ... Q60340 41078086
    1053079 9r51:L (2.3) BS01 SF4 N/A GO:0016151 ... Q60341 41078086
    1053080 9r51:L (2.3) BS02 FAD N/A GO:0016151 ... Q60341 41078086
    1053081 9r52:A (1.65) BS01 NFU N/A GO:0008901 ... Q60338 41078086
    1053082 9r52:A (1.65) BS02 FE N/A GO:0008901 ... Q60338 41078086
    1053083 9r52:B (1.65) BS01 SF4 N/A GO:0016151 ... Q60341 41078086
    1053084 9r52:B (1.65) BS02 FAD N/A GO:0016151 ... Q60341 41078086
    1053085 9r52:B (1.65) BS03 FE N/A GO:0016151 ... Q60341 41078086
    1053086 9r52:C (1.65) BS01 SF4 N/A GO:0016151 ... Q60340 41078086
    1053087 9r52:C (1.65) BS02 SF4 N/A GO:0016151 ... Q60340 41078086
    1053088 9r52:C (1.65) BS03 SF4 N/A GO:0016151 ... Q60340 41078086
    1053089 9r57:A (1.1) BS01 7M0 N/A GO:0000785 ... P19784 41461124
    1053090 9r59:A (3.0) BS01 A1JH4 N/A GO:0004672 ... P49137 40756524
    1053091 9r5b:A (1.09) BS01 A1JCY N/A GO:0000785 ... P19784 41461124
    1053092 9r5b:A (1.09) BS02 A1JCY N/A GO:0000785 ... P19784 41461124
    1053093 9r5c:A (1.04) BS01 A1JCZ N/A GO:0000785 ... P19784 41461124
    1053094 9r5c:A (1.04) BS02 4B0 N/A GO:0000785 ... P19784 41461124
    1053095 9r5d:A (1.02) BS01 A1JC0 N/A GO:0000785 ... P19784 41461124
    1053096 9r5f:A (1.19) BS01 A1JCX N/A GO:0000785 ... P19784 41461124
    1053097 9r5i:A (3.13) BS01 NFU N/A GO:0008901 ... Q60338 41078086
    1053098 9r5i:A (3.13) BS02 FE N/A GO:0008901 ... Q60338 41078086
    1053099 9r5i:B (3.13) BS01 FAD N/A GO:0016151 ... Q60341 41078086
    1053100 9r5i:B (3.13) BS02 SF4 N/A GO:0016151 ... Q60341 41078086
    1053101 9r5i:C (3.13) BS01 SF4 N/A GO:0016151 ... Q60340 41078086
    1053102 9r5i:C (3.13) BS02 SF4 N/A GO:0016151 ... Q60340 41078086
    1053103 9r5i:C (3.13) BS03 SF4 N/A GO:0016151 ... Q60340 41078086
    1053104 9r5i:C (3.13) BS04 FES N/A GO:0016151 ... Q60340 41078086
    1053105 9r5i:D (3.13) BS01 NFU N/A GO:0008901 ... Q60338 41078086
    1053106 9r5i:D (3.13) BS02 FE N/A GO:0008901 ... Q60338 41078086
    1053107 9r5i:E (3.13) BS01 FES N/A GO:0016151 ... Q60340 41078086
    1053108 9r5i:E (3.13) BS02 SF4 N/A GO:0016151 ... Q60340 41078086
    1053109 9r5i:E (3.13) BS03 SF4 N/A GO:0016151 ... Q60340 41078086
    1053110 9r5i:E (3.13) BS04 SF4 N/A GO:0016151 ... Q60340 41078086
    1053111 9r5i:F (3.13) BS01 FAD N/A GO:0016151 ... Q60341 41078086
    1053112 9r5i:F (3.13) BS02 SF4 N/A GO:0016151 ... Q60341 41078086
    1053113 9r5k:A (4.2) BS01 dna N/A GO:0000786 ... P84233 41439750
    1053114 9r5k:A (4.2) BS02 dna N/A GO:0000786 ... P84233 41439750
    1053115 9r5k:B (4.2) BS01 dna N/A GO:0000786 ... P62799 41439750
    1053116 9r5k:B (4.2) BS02 dna N/A GO:0000786 ... P62799 41439750
    1053117 9r5k:C (4.2) BS01 dna N/A GO:0000786 ... P06897 41439750
    1053118 9r5k:C (4.2) BS02 dna N/A GO:0000786 ... P06897 41439750
    1053119 9r5k:D (4.2) BS01 dna N/A GO:0000786 ... P02281 41439750
    1053120 9r5k:E (4.2) BS01 dna N/A GO:0000786 ... P84233 41439750
    1053121 9r5k:E (4.2) BS02 dna N/A GO:0000786 ... P84233 41439750
    1053122 9r5k:F (4.2) BS01 dna N/A GO:0000786 ... P62799 41439750
    1053123 9r5k:F (4.2) BS02 dna N/A GO:0000786 ... P62799 41439750
    1053124 9r5k:G (4.2) BS01 dna N/A GO:0000786 ... P06897 41439750
    1053125 9r5k:G (4.2) BS02 dna N/A GO:0000786 ... P06897 41439750
    1053126 9r5k:H (4.2) BS01 dna N/A GO:0000786 ... P02281 41439750
    1053127 9r5k:H (4.2) BS02 dna N/A GO:0000786 ... P02281 41439750
    1053128 9r5s:A (3.8) BS01 dna N/A GO:0000786 ... P84233 41439750
    1053129 9r5s:A (3.8) BS02 dna N/A GO:0000786 ... P84233 41439750
    1053130 9r5s:B (3.8) BS01 dna N/A GO:0000786 ... P62799 41439750
    1053131 9r5s:B (3.8) BS02 dna N/A GO:0000786 ... P62799 41439750
    1053132 9r5s:C (3.8) BS01 dna N/A GO:0000786 ... P06897 41439750
    1053133 9r5s:C (3.8) BS02 dna N/A GO:0000786 ... P06897 41439750
    1053134 9r5s:D (3.8) BS01 dna N/A GO:0000786 ... P02281 41439750
    1053135 9r5s:D (3.8) BS02 dna N/A GO:0000786 ... P02281 41439750
    1053136 9r5s:E (3.8) BS01 dna N/A GO:0000786 ... P84233 41439750
    1053137 9r5s:E (3.8) BS02 dna N/A GO:0000786 ... P84233 41439750
    1053138 9r5s:F (3.8) BS01 dna N/A GO:0000786 ... P62799 41439750
    1053139 9r5s:F (3.8) BS02 dna N/A GO:0000786 ... P62799 41439750
    1053140 9r5s:G (3.8) BS01 dna N/A GO:0000786 ... P06897 41439750
    1053141 9r5s:G (3.8) BS02 dna N/A GO:0000786 ... P06897 41439750
    1053142 9r5s:H (3.8) BS01 dna N/A GO:0000786 ... P02281 41439750
    1053143 9r5s:W (3.8) BS01 dna N/A GO:0000124 ... P32657 41439750
    1053144 9r5s:W (3.8) BS02 dna N/A GO:0000124 ... P32657 41439750
    1053145 9r5t:A (1.89) BS01 ZN N/A GO:0000175 ... P0DTD1 40959264
    1053146 9r5t:A (1.89) BS02 ZN N/A GO:0000175 ... P0DTD1 40959264
    1053147 9r5t:A (1.89) BS03 ZN N/A GO:0000175 ... P0DTD1 40959264
    1053148 9r5t:A (1.89) BS04 SAH N/A GO:0000175 ... P0DTD1 40959264
    1053149 9r5t:A (1.89) BS05 A1JDF N/A GO:0000175 ... P0DTD1 40959264
    1053150 9r5t:B (1.89) BS01 ZN N/A GO:0000175 ... P0DTD1 40959264
    1053151 9r5t:B (1.89) BS02 ZN N/A GO:0000175 ... P0DTD1 40959264
    1053152 9r5t:B (1.89) BS03 ZN N/A GO:0000175 ... P0DTD1 40959264
    1053153 9r5t:B (1.89) BS04 SAH N/A GO:0000175 ... P0DTD1 40959264
    1053154 9r5t:B (1.89) BS05 A1JDF N/A GO:0000175 ... P0DTD1 40959264
    1053155 9r5w:A (3.8) BS01 dna N/A GO:0000786 ... P84233 41439750
    1053156 9r5w:A (3.8) BS02 dna N/A GO:0000786 ... P84233 41439750
    1053157 9r5w:B (3.8) BS01 dna N/A GO:0000786 ... P62799 41439750
    1053158 9r5w:C (3.8) BS01 dna N/A GO:0000786 ... P06897 41439750
    1053159 9r5w:C (3.8) BS02 dna N/A GO:0000786 ... P06897 41439750
    1053160 9r5w:D (3.8) BS01 dna N/A GO:0000786 ... P02281 41439750
    1053161 9r5w:E (3.8) BS01 dna N/A GO:0000786 ... P84233 41439750
    1053162 9r5w:E (3.8) BS02 dna N/A GO:0000786 ... P84233 41439750
    1053163 9r5w:F (3.8) BS01 dna N/A GO:0000786 ... P62799 41439750
    1053164 9r5w:F (3.8) BS02 dna N/A GO:0000786 ... P62799 41439750
    1053165 9r5w:G (3.8) BS01 dna N/A GO:0000786 ... P06897 41439750
    1053166 9r5w:H (3.8) BS01 dna N/A GO:0000786 ... P02281 41439750
    1053167 9r5w:H (3.8) BS02 dna N/A GO:0000786 ... P02281 41439750
    1053168 9r5z:A (1.8) BS01 A1JJU N/A GO:0004672 ... P52333 40756524
    1053169 9r5z:A (1.8) BS02 PHU N/A GO:0004672 ... P52333 40756524
    1053170 9r5z:B (1.8) BS01 A1JJU N/A GO:0004672 ... P52333 40756524
    1053171 9r5z:B (1.8) BS02 PHU N/A GO:0004672 ... P52333 40756524
    1053172 9r62:I (3.4) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053173 9r62:J (3.4) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053174 9r62:K (3.4) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053175 9r62:L (3.4) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053176 9r62:M (3.4) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053177 9r62:N (3.4) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053178 9r62:O (3.4) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053179 9r62:P (3.4) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053180 9r63:I (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053181 9r63:J (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053182 9r63:K (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053183 9r63:L (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053184 9r63:M (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053185 9r63:N (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053186 9r63:O (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053187 9r63:P (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053188 9r64:I (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053189 9r64:J (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053190 9r64:K (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053191 9r64:L (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053192 9r64:M (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053193 9r64:N (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053194 9r64:N (3.5) BS02 MG N/A GO:0004713 ... P76387 N/A
    1053195 9r64:O (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053196 9r64:P (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053197 9r64:P (3.5) BS02 MG N/A GO:0004713 ... P76387 N/A
    1053198 9r65:I (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053199 9r65:J (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053200 9r65:K (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).