SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1053201 9r65:L (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053202 9r65:M (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053203 9r65:N (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053204 9r65:O (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053205 9r65:P (3.2) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053206 9r66:I (3.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053207 9r66:J (3.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053208 9r66:K (3.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053209 9r66:L (3.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053210 9r66:M (3.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053211 9r66:N (3.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053212 9r66:O (3.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053213 9r66:P (3.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053214 9r67:I (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053215 9r67:J (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053216 9r67:K (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053217 9r67:L (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053218 9r67:M (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053219 9r67:N (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053220 9r67:O (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053221 9r67:P (3.5) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053222 9r68:I (5.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053223 9r68:J (5.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053224 9r68:K (5.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053225 9r68:L (5.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053226 9r68:M (5.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053227 9r68:N (5.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053228 9r68:O (5.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053229 9r68:P (5.8) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053230 9r69:I (4.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053231 9r69:J (4.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053232 9r69:K (4.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053233 9r69:L (4.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053234 9r69:M (4.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053235 9r69:N (4.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053236 9r69:O (4.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053237 9r69:P (4.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053238 9r6a:I (6.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053239 9r6a:J (6.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053240 9r6a:K (6.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053241 9r6a:L (6.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053242 9r6a:M (6.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053243 9r6a:N (6.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053244 9r6a:O (6.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053245 9r6a:P (6.3) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053246 9r6b:I (4.6) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053247 9r6b:J (4.6) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053248 9r6b:K (4.6) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053249 9r6b:L (4.6) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053250 9r6b:M (4.6) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053251 9r6b:N (4.6) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053252 9r6b:O (4.6) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053253 9r6b:P (4.6) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053254 9r6c:I (6.7) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053255 9r6c:J (6.7) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053256 9r6c:K (6.7) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053257 9r6c:L (6.7) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053258 9r6c:M (6.7) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053259 9r6c:N (6.7) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053260 9r6c:O (6.7) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053261 9r6c:P (6.7) BS01 ADP N/A GO:0004713 ... P76387 N/A
    1053262 9r6i:A (1.7) BS01 A1JDE N/A N/A P37231 41650247
    1053263 9r6k:A (2.3) BS01 A1JDD N/A N/A P37231 41650247
    1053264 9r6m:A (3.55) BS01 PO4 N/A GO:0004807 ... Q5S7Y5 40946919
    1053265 9r6m:B (3.55) BS01 PO4 N/A GO:0004807 ... Q5S7Y5 40946919
    1053266 9r6m:B (3.55) BS02 PO4 N/A GO:0004807 ... Q5S7Y5 40946919
    1053267 9r6n:A (1.4) BS01 A1IDQ N/A GO:0001758 ... O94788 41491403
    1053268 9r6n:B (1.4) BS01 A1IDQ N/A GO:0001758 ... O94788 41491403
    1053269 9r6n:C (1.4) BS01 A1IDQ N/A GO:0001758 ... O94788 41491403
    1053270 9r6n:D (1.4) BS01 A1IDQ N/A GO:0001758 ... O94788 41491403
    1053271 9r6p:A (3.1) BS01 5N6 N/A GO:0016020 ... Q2QKN3 41073662
    1053272 9r6p:C (3.1) BS01 5N6 N/A GO:0016020 ... Q2QKN3 41073662
    1053273 9r6p:H (3.1) BS01 5N6 N/A GO:0016020 ... Q2QKN3 41073662
    1053274 9r6q:A (3.5) BS01 5N6 N/A GO:0016020 ... Q2QKN3 41073662
    1053275 9r6r:A (3.3) BS01 5N6 N/A GO:0016020 ... Q2QKN3 41073662
    1053276 9r6s:A (3.1) BS01 8Z9 N/A N/A N/A N/A
    1053277 9r6s:A (3.1) BS02 8Z9 N/A N/A N/A N/A
    1053278 9r6s:B (3.1) BS01 8Z9 N/A N/A N/A N/A
    1053279 9r6s:B (3.1) BS02 8Z9 N/A N/A N/A N/A
    1053280 9r6s:C (3.1) BS01 8Z9 N/A N/A N/A N/A
    1053281 9r6s:C (3.1) BS02 8Z9 N/A N/A N/A N/A
    1053282 9r6t:A (2.76) BS01 8Z9 N/A N/A N/A N/A
    1053283 9r6t:A (2.76) BS02 8Z9 N/A N/A N/A N/A
    1053284 9r6t:B (2.76) BS01 8Z9 N/A N/A N/A N/A
    1053285 9r6t:B (2.76) BS02 8Z9 N/A N/A N/A N/A
    1053286 9r6t:C (2.76) BS01 8Z9 N/A N/A N/A N/A
    1053287 9r6t:C (2.76) BS02 8Z9 N/A N/A N/A N/A
    1053288 9r6u:A (1.77) BS01 AP5 N/A GO:0000287 ... P69441 41042980
    1053289 9r6u:B (1.77) BS01 AP5 N/A GO:0000287 ... P69441 41042980
    1053290 9r6v:A (1.61) BS01 MG N/A N/A Q5T447 41690955
    1053291 9r6v:B (1.61) BS01 MG N/A N/A Q5T447 41690955
    1053292 9r6z:A (2.85) BS01 NFU N/A GO:0008901 ... Q60338 41078086
    1053293 9r6z:B (2.85) BS01 FAD N/A GO:0016151 ... Q60341 41078086
    1053294 9r6z:B (2.85) BS02 SF4 N/A GO:0016151 ... Q60341 41078086
    1053295 9r6z:C (2.85) BS01 SF4 N/A GO:0016151 ... Q60340 41078086
    1053296 9r6z:C (2.85) BS02 SF4 N/A GO:0016151 ... Q60340 41078086
    1053297 9r6z:C (2.85) BS03 SF4 N/A GO:0016151 ... Q60340 41078086
    1053298 9r6z:D (2.85) BS01 NFU N/A GO:0008901 ... Q60338 41078086
    1053299 9r6z:D (2.85) BS02 SF4 N/A GO:0008901 ... Q60338 41078086
    1053300 9r6z:E (2.85) BS01 FAD N/A GO:0016151 ... Q60341 41078086
    1053301 9r6z:E (2.85) BS02 SF4 N/A GO:0016151 ... Q60341 41078086
    1053302 9r6z:F (2.85) BS01 SF4 N/A GO:0016151 ... Q60340 41078086
    1053303 9r6z:F (2.85) BS02 SF4 N/A GO:0016151 ... Q60340 41078086
    1053304 9r6z:F (2.85) BS03 SF4 N/A GO:0016151 ... Q60340 41078086
    1053305 9r6z:G (2.85) BS01 NFU N/A GO:0008901 ... Q60338 41078086
    1053306 9r6z:H (2.85) BS01 FAD N/A GO:0016151 ... Q60341 41078086
    1053307 9r6z:H (2.85) BS02 SF4 N/A GO:0016151 ... Q60341 41078086
    1053308 9r6z:I (2.85) BS01 SF4 N/A GO:0016151 ... Q60340 41078086
    1053309 9r6z:I (2.85) BS02 SF4 N/A GO:0016151 ... Q60340 41078086
    1053310 9r6z:I (2.85) BS03 SF4 N/A GO:0016151 ... Q60340 41078086
    1053311 9r6z:J (2.85) BS01 NFU N/A GO:0008901 ... Q60338 41078086
    1053312 9r6z:K (2.85) BS01 FAD N/A GO:0016151 ... Q60341 41078086
    1053313 9r6z:K (2.85) BS02 SF4 N/A GO:0016151 ... Q60341 41078086
    1053314 9r6z:L (2.85) BS01 SF4 N/A GO:0016151 ... Q60340 41078086
    1053315 9r6z:L (2.85) BS02 SF4 N/A GO:0016151 ... Q60340 41078086
    1053316 9r6z:L (2.85) BS03 SF4 N/A GO:0016151 ... Q60340 41078086
    1053317 9r71:A (1.61) BS01 AP5 N/A GO:0000287 ... P69441 41042980
    1053318 9r71:B (1.61) BS01 AP5 N/A GO:0000287 ... P69441 41042980
    1053319 9r75:C (3.8) BS01 dna N/A GO:0003677 ... Q8RQE9 41513851
    1053320 9r75:C (3.8) BS02 dna N/A GO:0003677 ... Q8RQE9 41513851
    1053321 9r75:D (3.8) BS01 dna N/A GO:0000287 ... Q8RQE8 41513851
    1053322 9r75:D (3.8) BS02 dna N/A GO:0000287 ... Q8RQE8 41513851
    1053323 9r75:D (3.8) BS03 ZN N/A GO:0000287 ... Q8RQE8 41513851
    1053324 9r75:D (3.8) BS04 ZN N/A GO:0000287 ... Q8RQE8 41513851
    1053325 9r75:D (3.8) BS05 MG N/A GO:0000287 ... Q8RQE8 41513851
    1053326 9r75:F (3.8) BS01 dna N/A GO:0003677 ... Q72L95 41513851
    1053327 9r75:F (3.8) BS02 dna N/A GO:0003677 ... Q72L95 41513851
    1053328 9r76:A (1.49) BS01 NAP N/A GO:0016491 ... D2PR38 40727968
    1053329 9r76:B (1.49) BS01 NAP N/A GO:0016491 ... D2PR38 40727968
    1053330 9r78:A (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053331 9r78:B (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053332 9r78:C (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053333 9r78:C (3.3) BS02 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053334 9r78:D (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053335 9r78:E (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053336 9r78:F (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053337 9r78:G (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053338 9r78:G (3.3) BS02 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053339 9r78:H (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053340 9r78:I (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053341 9r78:J (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053342 9r78:J (3.3) BS02 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053343 9r78:K (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053344 9r78:L (3.3) BS01 peptide N/A GO:0005198 ... K7ZJY8 N/A
    1053345 9r78:O (3.3) BS01 peptide N/A GO:0019028 ... K7ZJY9 N/A
    1053346 9r78:P (3.3) BS01 peptide N/A GO:0019028 ... K7ZJY9 N/A
    1053347 9r79:A (1.8) BS01 NAP N/A GO:0016491 ... D2PR38 40727968
    1053348 9r79:A (1.8) BS02 A1JDH N/A GO:0016491 ... D2PR38 40727968
    1053349 9r79:A (1.8) BS03 A1JDH N/A GO:0016491 ... D2PR38 40727968
    1053350 9r79:B (1.8) BS01 NAP N/A GO:0016491 ... D2PR38 40727968
    1053351 9r79:B (1.8) BS02 A1JDH N/A GO:0016491 ... D2PR38 40727968
    1053352 9r7a:A (1.91) BS01 NAP N/A GO:0016491 ... D2PR38 40727968
    1053353 9r7a:A (1.91) BS02 A1JDG N/A GO:0016491 ... D2PR38 40727968
    1053354 9r7a:A (1.91) BS03 A1JDG N/A GO:0016491 ... D2PR38 40727968
    1053355 9r7a:B (1.91) BS01 A1JDG N/A GO:0016491 ... D2PR38 40727968
    1053356 9r7a:B (1.91) BS02 NAP N/A GO:0016491 ... D2PR38 40727968
    1053357 9r7a:B (1.91) BS03 A1JDG N/A GO:0016491 ... D2PR38 40727968
    1053358 9r7j:A (2.73) BS01 FE N/A GO:0005506 ... P72360 41427678
    1053359 9r7j:A (2.73) BS02 FE N/A GO:0005506 ... P72360 41427678
    1053360 9r7j:A (2.73) BS03 O N/A GO:0005506 ... P72360 41427678
    1053361 9r7j:B (2.73) BS01 FE N/A GO:0005506 ... P72360 41427678
    1053362 9r7j:B (2.73) BS02 FE N/A GO:0005506 ... P72360 41427678
    1053363 9r7j:B (2.73) BS03 O N/A GO:0005506 ... P72360 41427678
    1053364 9r7j:C (2.73) BS01 FE N/A GO:0005506 ... P72360 41427678
    1053365 9r7j:C (2.73) BS02 FE N/A GO:0005506 ... P72360 41427678
    1053366 9r7j:D (2.73) BS01 FE N/A GO:0005506 ... P72360 41427678
    1053367 9r7j:D (2.73) BS02 FE N/A GO:0005506 ... P72360 41427678
    1053368 9r7j:D (2.73) BS03 O N/A GO:0005506 ... P72360 41427678
    1053369 9r7o:A (2.28) BS01 MN N/A N/A O51564 41742401
    1053370 9r7o:A (2.28) BS02 FE N/A N/A O51564 41742401
    1053371 9r7o:A (2.28) BS03 AMP N/A N/A O51564 41742401
    1053372 9r7o:B (2.28) BS01 MN N/A N/A O51564 41742401
    1053373 9r7o:B (2.28) BS02 FE N/A N/A O51564 41742401
    1053374 9r7o:C (2.28) BS01 MN N/A N/A O51564 41742401
    1053375 9r7o:C (2.28) BS02 FE N/A N/A O51564 41742401
    1053376 9r7o:C (2.28) BS03 AMP N/A N/A O51564 41742401
    1053377 9r7o:D (2.28) BS01 MN N/A N/A O51564 41742401
    1053378 9r7o:D (2.28) BS02 FE N/A N/A O51564 41742401
    1053379 9r7o:E (2.28) BS01 MN N/A N/A O51564 41742401
    1053380 9r7o:E (2.28) BS02 FE N/A N/A O51564 41742401
    1053381 9r7o:E (2.28) BS03 AMP N/A N/A O51564 41742401
    1053382 9r7o:F (2.28) BS01 MN N/A N/A O51564 41742401
    1053383 9r7o:F (2.28) BS02 FE N/A N/A O51564 41742401
    1053384 9r7o:G (2.28) BS01 MN N/A N/A O51564 41742401
    1053385 9r7o:G (2.28) BS02 FE N/A N/A O51564 41742401
    1053386 9r7o:G (2.28) BS03 AMP N/A N/A O51564 41742401
    1053387 9r7o:H (2.28) BS01 MN N/A N/A O51564 41742401
    1053388 9r7o:H (2.28) BS02 FE N/A N/A O51564 41742401
    1053389 9r7r:Aa (2.39) BS01 rna N/A N/A Q85197 41530503
    1053390 9r7r:Ac (2.39) BS01 rna N/A N/A Q85197 41530503
    1053391 9r7r:Ac (2.39) BS02 rna N/A N/A Q85197 41530503
    1053392 9r7r:Ae (2.39) BS01 rna N/A N/A Q85197 41530503
    1053393 9r7r:Ag (2.39) BS01 rna N/A N/A Q85197 41530503
    1053394 9r7r:Ai (2.39) BS01 rna N/A N/A Q85197 41530503
    1053395 9r7r:Ak (2.39) BS01 rna N/A N/A Q85197 41530503
    1053396 9r7r:Am (2.39) BS01 rna N/A N/A Q85197 41530503
    1053397 9r7r:Ao (2.39) BS01 rna N/A N/A Q85197 41530503
    1053398 9r7r:Aq (2.39) BS01 rna N/A N/A Q85197 41530503
    1053399 9r7r:As (2.39) BS01 rna N/A N/A Q85197 41530503
    1053400 9r7r:Au (2.39) BS01 rna N/A N/A Q85197 41530503

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).