SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5261 5262 5263 5264 5265 5266 5267 5268 5269 5270 5271 5272 5273 5274 5275 5276 5277 5278 5279 5280 5281 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1054001 9r9z:Bm (3.4) BS02 rna N/A N/A Q82933 41530503
    1054002 9r9z:Bo (3.4) BS01 rna N/A N/A Q82933 41530503
    1054003 9r9z:Bo (3.4) BS02 rna N/A N/A Q82933 41530503
    1054004 9r9z:Bq (3.4) BS01 rna N/A N/A Q82933 41530503
    1054005 9r9z:Bq (3.4) BS02 rna N/A N/A Q82933 41530503
    1054006 9r9z:Bs (3.4) BS01 rna N/A N/A Q82933 41530503
    1054007 9r9z:Bu (3.4) BS01 rna N/A N/A Q82933 41530503
    1054008 9r9z:Bu (3.4) BS02 rna N/A N/A Q82933 41530503
    1054009 9r9z:Bw (3.4) BS01 rna N/A N/A Q82933 41530503
    1054010 9r9z:Bw (3.4) BS02 rna N/A N/A Q82933 41530503
    1054011 9r9z:By (3.4) BS01 rna N/A N/A Q82933 41530503
    1054012 9r9z:Ca (3.4) BS01 rna N/A N/A Q82933 41530503
    1054013 9r9z:Ca (3.4) BS02 rna N/A N/A Q82933 41530503
    1054014 9r9z:Cc (3.4) BS01 rna N/A N/A Q82933 41530503
    1054015 9r9z:Ce (3.4) BS01 rna N/A N/A Q82933 41530503
    1054016 9r9z:Ce (3.4) BS02 rna N/A N/A Q82933 41530503
    1054017 9r9z:Cg (3.4) BS01 rna N/A N/A Q82933 41530503
    1054018 9r9z:Cg (3.4) BS02 rna N/A N/A Q82933 41530503
    1054019 9r9z:Ci (3.4) BS01 rna N/A N/A Q82933 41530503
    1054020 9r9z:Ck (3.4) BS01 rna N/A N/A Q82933 41530503
    1054021 9r9z:Cm (3.4) BS01 rna N/A N/A Q82933 41530503
    1054022 9r9z:Cm (3.4) BS02 rna N/A N/A Q82933 41530503
    1054023 9r9z:Co (3.4) BS01 rna N/A N/A Q82933 41530503
    1054024 9r9z:Co (3.4) BS02 rna N/A N/A Q82933 41530503
    1054025 9r9z:Cq (3.4) BS01 rna N/A N/A Q82933 41530503
    1054026 9r9z:Cq (3.4) BS02 rna N/A N/A Q82933 41530503
    1054027 9r9z:Cs (3.4) BS01 rna N/A N/A Q82933 41530503
    1054028 9rad:A (3.36) BS01 dna N/A N/A N/A N/A
    1054029 9rad:A (3.36) BS02 dna N/A N/A N/A N/A
    1054030 9rad:A (3.36) BS03 ZN N/A N/A N/A N/A
    1054031 9rae:B (3.88) BS01 dna N/A N/A Q9T221 N/A
    1054032 9rae:B (3.88) BS02 dna N/A N/A Q9T221 N/A
    1054033 9rae:B (3.88) BS03 ZN N/A N/A Q9T221 N/A
    1054034 9raf:A (2.15) BS01 peptide N/A N/A N/A 41818353
    1054035 9raf:A (2.15) BS02 rna N/A N/A N/A 41818353
    1054036 9raf:A (2.15) BS03 MG N/A N/A N/A 41818353
    1054037 9raf:B (2.15) BS01 rna N/A N/A N/A 41818353
    1054038 9raf:B (2.15) BS02 rna N/A N/A N/A 41818353
    1054039 9raf:B (2.15) BS03 MG N/A N/A N/A 41818353
    1054040 9raf:B (2.15) BS04 MG N/A N/A N/A 41818353
    1054041 9raf:C (2.15) BS01 rna N/A N/A N/A 41818353
    1054042 9raf:C (2.15) BS02 rna N/A N/A N/A 41818353
    1054043 9rag:A (1.99) BS01 peptide N/A N/A N/A 41818353
    1054044 9rag:A (1.99) BS02 rna N/A N/A N/A 41818353
    1054045 9rag:A (1.99) BS03 MG N/A N/A N/A 41818353
    1054046 9rag:B (1.99) BS01 rna N/A N/A N/A 41818353
    1054047 9rag:B (1.99) BS02 rna N/A N/A N/A 41818353
    1054048 9rag:B (1.99) BS03 MG N/A N/A N/A 41818353
    1054049 9rag:B (1.99) BS04 MG N/A N/A N/A 41818353
    1054050 9rag:B (1.99) BS05 POP N/A N/A N/A 41818353
    1054051 9rag:C (1.99) BS01 rna N/A N/A N/A 41818353
    1054052 9rag:C (1.99) BS02 rna N/A N/A N/A 41818353
    1054053 9rah:A (4.37) BS01 dna N/A N/A Q9T221 N/A
    1054054 9rah:A (4.37) BS02 dna N/A N/A Q9T221 N/A
    1054055 9rah:A (4.37) BS03 ZN N/A N/A Q9T221 N/A
    1054056 9rah:B (4.37) BS01 dna N/A N/A Q9T221 N/A
    1054057 9rah:B (4.37) BS02 dna N/A N/A Q9T221 N/A
    1054058 9rah:B (4.37) BS03 ZN N/A N/A Q9T221 N/A
    1054059 9rai:a (3.0) BS01 ADP N/A GO:0005524 ... Q2G0P5 41087538
    1054060 9rai:b (3.0) BS01 peptide N/A GO:0005524 ... Q2G0P5 41087538
    1054061 9rai:b (3.0) BS02 AGS N/A GO:0005524 ... Q2G0P5 41087538
    1054062 9rai:b (3.0) BS03 ADP N/A GO:0005524 ... Q2G0P5 41087538
    1054063 9rai:b (3.0) BS04 MG N/A GO:0005524 ... Q2G0P5 41087538
    1054064 9rai:b (3.0) BS05 AGS N/A GO:0005524 ... Q2G0P5 41087538
    1054065 9rai:c (3.0) BS01 peptide N/A GO:0005524 ... Q2G0P5 41087538
    1054066 9rai:c (3.0) BS02 AGS N/A GO:0005524 ... Q2G0P5 41087538
    1054067 9rai:c (3.0) BS03 AGS N/A GO:0005524 ... Q2G0P5 41087538
    1054068 9rai:c (3.0) BS04 MG N/A GO:0005524 ... Q2G0P5 41087538
    1054069 9rai:c (3.0) BS05 AGS N/A GO:0005524 ... Q2G0P5 41087538
    1054070 9rai:d (3.0) BS01 peptide N/A GO:0005524 ... Q2G0P5 41087538
    1054071 9rai:d (3.0) BS02 AGS N/A GO:0005524 ... Q2G0P5 41087538
    1054072 9rai:d (3.0) BS03 AGS N/A GO:0005524 ... Q2G0P5 41087538
    1054073 9rai:d (3.0) BS04 MG N/A GO:0005524 ... Q2G0P5 41087538
    1054074 9rai:d (3.0) BS05 MG N/A GO:0005524 ... Q2G0P5 41087538
    1054075 9rai:d (3.0) BS06 ADP N/A GO:0005524 ... Q2G0P5 41087538
    1054076 9rai:e (3.0) BS01 peptide N/A GO:0005524 ... Q2G0P5 41087538
    1054077 9rai:e (3.0) BS02 ADP N/A GO:0005524 ... Q2G0P5 41087538
    1054078 9rai:e (3.0) BS03 AGS N/A GO:0005524 ... Q2G0P5 41087538
    1054079 9rai:e (3.0) BS04 MG N/A GO:0005524 ... Q2G0P5 41087538
    1054080 9rai:e (3.0) BS05 MG N/A GO:0005524 ... Q2G0P5 41087538
    1054081 9rai:f (3.0) BS01 ADP N/A GO:0005524 ... Q2G0P5 41087538
    1054082 9raj:A (1.7) BS01 DXU N/A N/A A0A0H3H219 41326695
    1054083 9rao:A (1.7) BS01 CXU N/A N/A A0A0H3H219 41326695
    1054084 9ras:A (1.57) BS01 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054085 9ras:A (1.57) BS02 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054086 9ras:B (1.57) BS01 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054087 9ras:B (1.57) BS02 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054088 9ras:B (1.57) BS03 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054089 9ras:C (1.57) BS01 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054090 9ras:C (1.57) BS02 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054091 9ras:C (1.57) BS03 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054092 9ras:D (1.57) BS01 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054093 9ras:D (1.57) BS02 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054094 9ras:D (1.57) BS03 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054095 9ras:E (1.57) BS01 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054096 9ras:E (1.57) BS02 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054097 9ras:F (1.57) BS01 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054098 9ras:F (1.57) BS02 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054099 9ras:G (1.57) BS01 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054100 9ras:G (1.57) BS02 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054101 9ras:G (1.57) BS03 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054102 9ras:H (1.57) BS01 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054103 9ras:H (1.57) BS02 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054104 9ras:H (1.57) BS03 A1JDZ N/A GO:0008886 ... A0A4U9C786 41437515
    1054105 9rau:A (1.77) BS01 T5V N/A GO:0008886 ... Q99Z67 41437515
    1054106 9rau:B (1.77) BS01 T5V N/A GO:0008886 ... Q99Z67 41437515
    1054107 9rau:C (1.77) BS01 T5V N/A GO:0008886 ... Q99Z67 41437515
    1054108 9rau:D (1.77) BS01 T5V N/A GO:0008886 ... Q99Z67 41437515
    1054109 9rau:E (1.77) BS01 T5V N/A GO:0008886 ... Q99Z67 41437515
    1054110 9rau:F (1.77) BS01 T5V N/A GO:0008886 ... Q99Z67 41437515
    1054111 9rau:G (1.77) BS01 T5V N/A GO:0008886 ... Q99Z67 41437515
    1054112 9rau:H (1.77) BS01 T5V N/A GO:0008886 ... Q99Z67 41437515
    1054113 9rav:A (1.5) BS01 A1JDY N/A GO:0008886 ... A0A4U9C786 41437515
    1054114 9rav:B (1.5) BS01 A1JDY N/A GO:0008886 ... A0A4U9C786 41437515
    1054115 9rav:C (1.5) BS01 A1JDY N/A GO:0008886 ... A0A4U9C786 41437515
    1054116 9rav:D (1.5) BS01 A1JDY N/A GO:0008886 ... A0A4U9C786 41437515
    1054117 9rav:E (1.5) BS01 A1JDY N/A GO:0008886 ... A0A4U9C786 41437515
    1054118 9rav:F (1.5) BS01 A1JDY N/A GO:0008886 ... A0A4U9C786 41437515
    1054119 9rav:G (1.5) BS01 A1JDY N/A GO:0008886 ... A0A4U9C786 41437515
    1054120 9rav:H (1.5) BS01 A1JDY N/A GO:0008886 ... A0A4U9C786 41437515
    1054121 9raz:A (1.38) BS01 NAP N/A GO:0008886 ... Q99Z67 41437515
    1054122 9raz:B (1.38) BS01 NAP N/A GO:0008886 ... Q99Z67 41437515
    1054123 9raz:E (1.38) BS01 NAP N/A GO:0008886 ... Q99Z67 41437515
    1054124 9raz:F (1.38) BS01 G3H N/A GO:0008886 ... Q99Z67 41437515
    1054125 9raz:F (1.38) BS02 NAP N/A GO:0008886 ... Q99Z67 41437515
    1054126 9rb1:A (1.61) BS01 XHD N/A GO:0008886 ... Q99Z67 41437515
    1054127 9rb1:B (1.61) BS01 XHD N/A GO:0008886 ... Q99Z67 41437515
    1054128 9rb1:C (1.61) BS01 XHD N/A GO:0008886 ... Q99Z67 41437515
    1054129 9rb1:D (1.61) BS01 XHD N/A GO:0008886 ... Q99Z67 41437515
    1054130 9rb1:E (1.61) BS01 XHD N/A GO:0008886 ... Q99Z67 41437515
    1054131 9rb1:F (1.61) BS01 XHD N/A GO:0008886 ... Q99Z67 41437515
    1054132 9rb1:G (1.61) BS01 XHD N/A GO:0008886 ... Q99Z67 41437515
    1054133 9rb1:H (1.61) BS01 XHD N/A GO:0008886 ... Q99Z67 41437515
    1054134 9rbg:AAA (1.46) BS01 DVT N/A GO:0003796 ... P00698 40757088
    1054135 9rbg:AAA (1.46) BS02 A1JFD N/A GO:0003796 ... P00698 40757088
    1054136 9rbg:AAA (1.46) BS03 VVO N/A GO:0003796 ... P00698 40757088
    1054137 9rbq:A (2.7) BS01 CA N/A N/A E9PKG2
    P01863
    41419770
    1054138 9rbt:AAA (1.18) BS01 DVT N/A GO:0003796 ... P00698 40757088
    1054139 9rbt:AAA (1.18) BS02 A1JFD N/A GO:0003796 ... P00698 40757088
    1054140 9rbz:A (1.8) BS01 C2E N/A N/A N/A N/A
    1054141 9rbz:A (1.8) BS02 C2E N/A N/A N/A N/A
    1054142 9rbz:B (1.8) BS01 C2E N/A N/A N/A N/A
    1054143 9rbz:B (1.8) BS02 C2E N/A N/A N/A N/A
    1054144 9rbz:C (1.8) BS01 C2E N/A N/A N/A N/A
    1054145 9rbz:C (1.8) BS02 C2E N/A N/A N/A N/A
    1054146 9rbz:D (1.8) BS01 C2E N/A N/A N/A N/A
    1054147 9rbz:D (1.8) BS02 C2E N/A N/A N/A N/A
    1054148 9rc3:A (2.7) BS01 CU N/A N/A N/A 41432273
    1054149 9rc3:A (2.7) BS02 CU N/A N/A N/A 41432273
    1054150 9rc3:A (2.7) BS03 CU N/A N/A N/A 41432273
    1054151 9rc3:A (2.7) BS04 CU N/A N/A N/A 41432273
    1054152 9rc3:A (2.7) BS05 AG N/A N/A N/A 41432273
    1054153 9rc3:B (2.7) BS01 CU N/A N/A N/A 41432273
    1054154 9rc3:B (2.7) BS02 CU N/A N/A N/A 41432273
    1054155 9rc3:B (2.7) BS03 CU N/A N/A N/A 41432273
    1054156 9rc3:B (2.7) BS04 CU N/A N/A N/A 41432273
    1054157 9rc3:B (2.7) BS05 AG N/A N/A N/A 41432273
    1054158 9rc4:A (1.74) BS01 GOL N/A N/A A0A0F6AUT4 40824293
    1054159 9rc4:B (1.74) BS01 GOL N/A N/A A0A0F6AUT4 40824293
    1054160 9rc5:A (2.1) BS01 CU N/A N/A N/A 41432273
    1054161 9rc5:A (2.1) BS02 CU N/A N/A N/A 41432273
    1054162 9rc5:A (2.1) BS03 CU N/A N/A N/A 41432273
    1054163 9rc5:A (2.1) BS04 CU N/A N/A N/A 41432273
    1054164 9rc5:A (2.1) BS05 AG N/A N/A N/A 41432273
    1054165 9rc5:A (2.1) BS06 AG N/A N/A N/A 41432273
    1054166 9rc6:A (2.6) BS01 CU N/A N/A A0AB73HHR8 41432273
    1054167 9rc6:A (2.6) BS02 CU N/A N/A A0AB73HHR8 41432273
    1054168 9rc6:A (2.6) BS03 CU N/A N/A A0AB73HHR8 41432273
    1054169 9rc6:A (2.6) BS04 CU N/A N/A A0AB73HHR8 41432273
    1054170 9rc6:C (2.6) BS01 peptide N/A N/A A0AB73HHR8 41432273
    1054171 9rc6:C (2.6) BS02 CU N/A N/A A0AB73HHR8 41432273
    1054172 9rc6:C (2.6) BS03 CU N/A N/A A0AB73HHR8 41432273
    1054173 9rc6:C (2.6) BS04 CU N/A N/A A0AB73HHR8 41432273
    1054174 9rc6:C (2.6) BS05 CU N/A N/A A0AB73HHR8 41432273
    1054175 9rc8:A (3.2) BS01 CU N/A N/A N/A 41432273
    1054176 9rc8:A (3.2) BS02 CU N/A N/A N/A 41432273
    1054177 9rc8:A (3.2) BS03 CU N/A N/A N/A 41432273
    1054178 9rc8:A (3.2) BS04 CU N/A N/A N/A 41432273
    1054179 9rc8:C (3.2) BS01 CU N/A N/A N/A 41432273
    1054180 9rc8:C (3.2) BS02 CU N/A N/A N/A 41432273
    1054181 9rc8:C (3.2) BS03 CU N/A N/A N/A 41432273
    1054182 9rc8:C (3.2) BS04 CU N/A N/A N/A 41432273
    1054183 9rcc:A (2.8) BS01 LBV N/A GO:0000155 ... Q9HWR3 41317121
    1054184 9rcc:B (2.8) BS01 LBV N/A GO:0000155 ... Q9HWR3 41317121
    1054185 9rcg:A (2.1) BS01 peptide N/A GO:0003677 ... Q9PTN2 40968099
    1054186 9rcg:A (2.1) BS02 A1JD5 N/A GO:0003677 ... Q9PTN2 40968099
    1054187 9rci:A (1.662) BS01 MG N/A GO:0003677 ... P39748 40963090
    1054188 9rci:A (1.662) BS02 A1JD4 N/A GO:0003677 ... P39748 40963090
    1054189 9rci:B (1.662) BS01 MG N/A GO:0003677 ... P39748 40963090
    1054190 9rci:B (1.662) BS02 A1JD4 N/A GO:0003677 ... P39748 40963090
    1054191 9rcj:A (2.45) BS01 peptide N/A N/A A0AB73HHR8 41432273
    1054192 9rcj:A (2.45) BS02 CU N/A N/A A0AB73HHR8 41432273
    1054193 9rcj:A (2.45) BS03 CU N/A N/A A0AB73HHR8 41432273
    1054194 9rcj:A (2.45) BS04 CU N/A N/A A0AB73HHR8 41432273
    1054195 9rcj:A (2.45) BS05 CU N/A N/A A0AB73HHR8 41432273
    1054196 9rcj:A (2.45) BS06 CU N/A N/A A0AB73HHR8 41432273
    1054197 9rcj:A (2.45) BS07 CU N/A N/A A0AB73HHR8 41432273
    1054198 9rcj:B (2.45) BS01 peptide N/A N/A A0AB73HHR8 41432273
    1054199 9rcj:B (2.45) BS02 CU N/A N/A A0AB73HHR8 41432273
    1054200 9rcj:B (2.45) BS03 CU N/A N/A A0AB73HHR8 41432273

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).