SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1055401 9rs2:A (2.3) BS01 MG N/A GO:0010333 ... A0A561SAF2 40931719
    1055402 9rs2:A (2.3) BS02 MG N/A GO:0010333 ... A0A561SAF2 40931719
    1055403 9rs2:A (2.3) BS03 A1JI6 N/A GO:0010333 ... A0A561SAF2 40931719
    1055404 9rs3:A (2.11) BS01 SAH N/A N/A Q86U44 N/A
    1055405 9rs3:B (2.11) BS01 MG N/A N/A Q9HCE5 N/A
    1055406 9rs3:B (2.11) BS02 A1JI7 N/A N/A Q9HCE5 N/A
    1055407 9rsa:B (1.8) BS01 ADU 4.6.1.18 GO:0003676 ... P61823 2340284
    1055408 9rsj:A (3.1) BS01 DM2 N/A GO:0005886 ... C3LML9 41260293
    1055409 9rsw:A (2.56) BS01 A1JJH N/A N/A Q86U44 N/A
    1055410 9rsw:B (2.56) BS01 MG N/A N/A Q9HCE5 N/A
    1055411 9rsx:Rg (2.91) BS01 peptide N/A GO:0001891 ... P63244 41261136
    1055412 9rsx:Rg (2.91) BS02 peptide N/A GO:0001891 ... P63244 41261136
    1055413 9rsx:Rg (2.91) BS03 peptide N/A GO:0001891 ... P63244 41261136
    1055414 9rt6:B (1.897) BS01 BTN N/A GO:0005576 ... P24471 N/A
    1055415 9rti:A (2.197) BS01 AGS N/A GO:0003676 ... Q14191 41038585
    1055416 9rti:A (2.197) BS02 A1JJ8 N/A GO:0003676 ... Q14191 41038585
    1055417 9rti:A (2.197) BS03 A1JJQ N/A GO:0003676 ... Q14191 41038585
    1055418 9rti:A (2.197) BS04 ZN N/A GO:0003676 ... Q14191 41038585
    1055419 9rtj:B (-1.00) BS01 dna N/A N/A Q54324 N/A
    1055420 9rtj:B (-1.00) BS02 DGT N/A N/A Q54324 N/A
    1055421 9rtj:B (-1.00) BS03 ATP N/A N/A Q54324 N/A
    1055422 9rtj:B (-1.00) BS04 MG N/A N/A Q54324 N/A
    1055423 9rtl:A (1.8) BS01 A1EI4 N/A N/A Q8KFZ1 N/A
    1055424 9rtl:B (1.8) BS01 A1EI4 N/A N/A Q8KFZ1 N/A
    1055425 9rtm:A (2.1) BS01 A1EI4 N/A N/A Q8KFZ1 N/A
    1055426 9rtm:B (2.1) BS01 A1EI4 N/A N/A Q8KFZ1 N/A
    1055427 9rtn:M (3.82) BS01 peptide N/A GO:0003676 ... Q7KZ85 41162378
    1055428 9rtt:A (4.01) BS01 rna N/A GO:0001172 ... A0A8D1DPV6 40835814
    1055429 9rtt:A (4.01) BS02 dna N/A GO:0001172 ... A0A8D1DPV6 40835814
    1055430 9rtt:A (4.01) BS03 dna N/A GO:0001172 ... A0A8D1DPV6 40835814
    1055431 9rtt:A (4.01) BS04 ZN N/A GO:0001172 ... A0A8D1DPV6 40835814
    1055432 9rtt:A (4.01) BS05 ZN N/A GO:0001172 ... A0A8D1DPV6 40835814
    1055433 9rtt:A (4.01) BS06 MG N/A GO:0001172 ... A0A8D1DPV6 40835814
    1055434 9rtt:B (4.01) BS01 rna N/A GO:0000781 ... I3LGP4 40835814
    1055435 9rtt:B (4.01) BS02 dna N/A GO:0000781 ... I3LGP4 40835814
    1055436 9rtt:B (4.01) BS03 ZN N/A GO:0000781 ... I3LGP4 40835814
    1055437 9rtt:C (4.01) BS01 ZN N/A GO:0003677 ... I3LCH3 40835814
    1055438 9rtt:E (4.01) BS01 dna N/A GO:0003677 ... I3LSI7 40835814
    1055439 9rtt:I (4.01) BS01 ZN N/A GO:0001193 ... P60899 40835814
    1055440 9rtt:I (4.01) BS02 ZN N/A GO:0001193 ... P60899 40835814
    1055441 9rtt:J (4.01) BS01 ZN N/A GO:0003677 ... A0A4X1VYD0 40835814
    1055442 9rtt:L (4.01) BS01 ZN N/A GO:0001650 ... A0A8D0JYF1 40835814
    1055443 9rtt:M (4.01) BS01 rna N/A GO:0003676 ... Q7KZ85 40835814
    1055444 9rtt:Y (4.01) BS01 ZN N/A GO:0000122 ... P63272 40835814
    1055445 9rtt:Z (4.01) BS01 rna N/A GO:0000122 ... O00267 40835814
    1055446 9rtt:a (4.01) BS01 dna N/A GO:0005515 ... Q96ST2 40835814
    1055447 9rtt:a (4.01) BS02 dna N/A GO:0005515 ... Q96ST2 40835814
    1055448 9rtu:0 (3.0) BS01 rna N/A GO:0000027 ... P0A7N4 41162373
    1055449 9rtu:0 (3.0) BS02 MG N/A GO:0000027 ... P0A7N4 41162373
    1055450 9rtu:1 (3.0) BS01 rna N/A GO:0000027 ... P0A7N9 41162373
    1055451 9rtu:2 (3.0) BS01 rna N/A GO:0002181 ... P0A7P5 41162373
    1055452 9rtu:3 (3.0) BS01 rna N/A GO:0002181 ... P0A7Q1 41162373
    1055453 9rtu:4 (3.0) BS01 rna N/A GO:0002181 ... P0A7Q6 41162373
    1055454 9rtu:4 (3.0) BS02 ZN N/A GO:0002181 ... P0A7Q6 41162373
    1055455 9rtu:5 (3.0) BS01 rna N/A GO:0002181 ... P0A7J3 41162373
    1055456 9rtu:6 (3.0) BS01 rna N/A GO:0002181 ... P0A7M9 41162373
    1055457 9rtu:6 (3.0) BS02 ZN N/A GO:0002181 ... P0A7M9 41162373
    1055458 9rtu:C (3.0) BS01 rna N/A GO:0000027 ... P60422 41162373
    1055459 9rtu:C (3.0) BS02 rna N/A GO:0000027 ... P60422 41162373
    1055460 9rtu:C (3.0) BS03 MG N/A GO:0000027 ... P60422 41162373
    1055461 9rtu:D (3.0) BS01 rna N/A GO:0000027 ... P60438 41162373
    1055462 9rtu:E (3.0) BS01 rna N/A GO:0001070 ... P60723 41162373
    1055463 9rtu:F (3.0) BS01 rna N/A GO:0000027 ... P62399 41162373
    1055464 9rtu:F (3.0) BS02 rna N/A GO:0000027 ... P62399 41162373
    1055465 9rtu:G (3.0) BS01 rna N/A GO:0000027 ... P0AG55 41162373
    1055466 9rtu:H (3.0) BS01 rna N/A GO:0002181 ... P0A7R1 41162373
    1055467 9rtu:I (3.0) BS01 rna N/A GO:0000027 ... P0A7J7 41162373
    1055468 9rtu:J (3.0) BS01 rna N/A GO:0002181 ... P0AA10 41162373
    1055469 9rtu:K (3.0) BS01 rna N/A GO:0002181 ... P0ADY3 41162373
    1055470 9rtu:K (3.0) BS02 rna N/A GO:0002181 ... P0ADY3 41162373
    1055471 9rtu:L (3.0) BS01 rna N/A GO:0002181 ... P02413 41162373
    1055472 9rtu:M (3.0) BS01 rna N/A GO:0000027 ... P0ADY7 41162373
    1055473 9rtu:M (3.0) BS02 rna N/A GO:0000027 ... P0ADY7 41162373
    1055474 9rtu:M (3.0) BS03 rna N/A GO:0000027 ... P0ADY7 41162373
    1055475 9rtu:N (3.0) BS01 rna N/A GO:0000027 ... P0AG44 41162373
    1055476 9rtu:O (3.0) BS01 rna N/A GO:0002181 ... P0C018 41162373
    1055477 9rtu:O (3.0) BS02 rna N/A GO:0002181 ... P0C018 41162373
    1055478 9rtu:P (3.0) BS01 rna N/A GO:0000027 ... P0A7K6 41162373
    1055479 9rtu:Q (3.0) BS01 rna N/A GO:0000027 ... P0A7L3 41162373
    1055480 9rtu:R (3.0) BS01 rna N/A GO:0002181 ... P0AG48 41162373
    1055481 9rtu:S (3.0) BS01 rna N/A GO:0002181 ... P61175 41162373
    1055482 9rtu:T (3.0) BS01 rna N/A GO:0000027 ... P0ADZ0 41162373
    1055483 9rtu:U (3.0) BS01 rna N/A GO:0000027 ... P60624 41162373
    1055484 9rtu:V (3.0) BS01 rna N/A GO:0000027 ... P68919 41162373
    1055485 9rtu:V (3.0) BS02 rna N/A GO:0000027 ... P68919 41162373
    1055486 9rtu:W (3.0) BS01 rna N/A GO:0000027 ... P0A7L8 41162373
    1055487 9rtu:W (3.0) BS02 rna N/A GO:0000027 ... P0A7L8 41162373
    1055488 9rtu:X (3.0) BS01 rna N/A GO:0000027 ... P0A7M2 41162373
    1055489 9rtu:Y (3.0) BS01 rna N/A GO:0000027 ... P0A7M6 41162373
    1055490 9rtu:Z (3.0) BS01 rna N/A GO:0000027 ... P0AG51 41162373
    1055491 9rtu:Z (3.0) BS02 rna N/A GO:0000027 ... P0AG51 41162373
    1055492 9rtu:b (3.0) BS01 rna N/A GO:0000028 ... P0A7V0 41162373
    1055493 9rtu:c (3.0) BS01 rna N/A GO:0000028 ... C3SQX2 41162373
    1055494 9rtu:d (3.0) BS01 rna N/A GO:0003723 ... C4ZUF1 41162373
    1055495 9rtu:e (3.0) BS01 rna N/A GO:0000028 ... P0A7W1 41162373
    1055496 9rtu:f (3.0) BS01 rna N/A GO:0002181 ... P02358 41162373
    1055497 9rtu:g (3.0) BS01 rna N/A GO:0000028 ... P02359 41162373
    1055498 9rtu:h (3.0) BS01 rna N/A GO:0000028 ... P0A7W7 41162373
    1055499 9rtu:i (3.0) BS01 rna N/A GO:0002181 ... P0A7X3 41162373
    1055500 9rtu:j (3.0) BS01 rna N/A GO:0000049 ... P0A7R5 41162373
    1055501 9rtu:k (3.0) BS01 rna N/A GO:0002181 ... P0A7R9 41162373
    1055502 9rtu:l (3.0) BS01 rna N/A GO:0000049 ... P0A7S3 41162373
    1055503 9rtu:m (3.0) BS01 rna N/A GO:0000049 ... P0A7S9 41162373
    1055504 9rtu:m (3.0) BS02 MG N/A GO:0000049 ... P0A7S9 41162373
    1055505 9rtu:n (3.0) BS01 rna N/A GO:0003735 ... P0AG59 41162373
    1055506 9rtu:n (3.0) BS02 MG N/A GO:0003735 ... P0AG59 41162373
    1055507 9rtu:o (3.0) BS01 rna N/A GO:0000028 ... P0ADZ4 41162373
    1055508 9rtu:o (3.0) BS02 rna N/A GO:0000028 ... P0ADZ4 41162373
    1055509 9rtu:p (3.0) BS01 rna N/A GO:0000028 ... P0A7T3 41162373
    1055510 9rtu:q (3.0) BS01 rna N/A GO:0000028 ... P0AG63 41162373
    1055511 9rtu:r (3.0) BS01 rna N/A GO:0002181 ... P0A7T7 41162373
    1055512 9rtu:s (3.0) BS01 rna N/A GO:0002181 ... P0A7U3 41162373
    1055513 9rtu:t (3.0) BS01 rna N/A GO:0000028 ... P0A7U7 41162373
    1055514 9rtu:u (3.0) BS01 rna N/A GO:0000028 ... P68679 41162373
    1055515 9rtu:x (3.0) BS01 rna N/A GO:0003746 ... C4ZUJ5 41162373
    1055516 9rtu:x (3.0) BS02 rna N/A GO:0003746 ... C4ZUJ5 41162373
    1055517 9rtu:x (3.0) BS03 GDP N/A GO:0003746 ... C4ZUJ5 41162373
    1055518 9rtv:0 (3.6) BS01 rna N/A GO:0000027 ... P0A7N4 41162373
    1055519 9rtv:1 (3.6) BS01 rna N/A GO:0000027 ... P0A7N9 41162373
    1055520 9rtv:2 (3.6) BS01 rna N/A GO:0002181 ... P0A7P5 41162373
    1055521 9rtv:3 (3.6) BS01 rna N/A GO:0002181 ... P0A7Q1 41162373
    1055522 9rtv:4 (3.6) BS01 rna N/A GO:0002181 ... P0A7Q6 41162373
    1055523 9rtv:4 (3.6) BS02 ZN N/A GO:0002181 ... P0A7Q6 41162373
    1055524 9rtv:5 (3.6) BS01 rna N/A GO:0002181 ... P0A7J3 41162373
    1055525 9rtv:6 (3.6) BS01 rna N/A GO:0002181 ... P0A7M9 41162373
    1055526 9rtv:6 (3.6) BS02 rna N/A GO:0002181 ... P0A7M9 41162373
    1055527 9rtv:6 (3.6) BS03 ZN N/A GO:0002181 ... P0A7M9 41162373
    1055528 9rtv:C (3.6) BS01 rna N/A GO:0000027 ... P60422 41162373
    1055529 9rtv:C (3.6) BS02 rna N/A GO:0000027 ... P60422 41162373
    1055530 9rtv:C (3.6) BS03 MG N/A GO:0000027 ... P60422 41162373
    1055531 9rtv:C (3.6) BS04 MG N/A GO:0000027 ... P60422 41162373
    1055532 9rtv:D (3.6) BS01 rna N/A GO:0000027 ... P60438 41162373
    1055533 9rtv:E (3.6) BS01 rna N/A GO:0001070 ... P60723 41162373
    1055534 9rtv:F (3.6) BS01 rna N/A GO:0000027 ... P62399 41162373
    1055535 9rtv:F (3.6) BS02 rna N/A GO:0000027 ... P62399 41162373
    1055536 9rtv:G (3.6) BS01 rna N/A GO:0000027 ... P0AG55 41162373
    1055537 9rtv:H (3.6) BS01 rna N/A GO:0002181 ... P0A7R1 41162373
    1055538 9rtv:I (3.6) BS01 rna N/A GO:0000027 ... P0A7J7 41162373
    1055539 9rtv:J (3.6) BS01 rna N/A GO:0002181 ... P0AA10 41162373
    1055540 9rtv:K (3.6) BS01 rna N/A GO:0002181 ... P0ADY3 41162373
    1055541 9rtv:K (3.6) BS02 rna N/A GO:0002181 ... P0ADY3 41162373
    1055542 9rtv:L (3.6) BS01 rna N/A GO:0002181 ... P02413 41162373
    1055543 9rtv:M (3.6) BS01 rna N/A GO:0000027 ... P0ADY7 41162373
    1055544 9rtv:M (3.6) BS02 rna N/A GO:0000027 ... P0ADY7 41162373
    1055545 9rtv:N (3.6) BS01 rna N/A GO:0000027 ... P0AG44 41162373
    1055546 9rtv:O (3.6) BS01 rna N/A GO:0002181 ... P0C018 41162373
    1055547 9rtv:O (3.6) BS02 rna N/A GO:0002181 ... P0C018 41162373
    1055548 9rtv:P (3.6) BS01 rna N/A GO:0000027 ... P0A7K6 41162373
    1055549 9rtv:P (3.6) BS02 rna N/A GO:0000027 ... P0A7K6 41162373
    1055550 9rtv:P (3.6) BS03 MG N/A GO:0000027 ... P0A7K6 41162373
    1055551 9rtv:Q (3.6) BS01 rna N/A GO:0000027 ... P0A7L3 41162373
    1055552 9rtv:R (3.6) BS01 rna N/A GO:0002181 ... P0AG48 41162373
    1055553 9rtv:S (3.6) BS01 rna N/A GO:0002181 ... P61175 41162373
    1055554 9rtv:T (3.6) BS01 rna N/A GO:0000027 ... P0ADZ0 41162373
    1055555 9rtv:U (3.6) BS01 rna N/A GO:0000027 ... P60624 41162373
    1055556 9rtv:V (3.6) BS01 rna N/A GO:0000027 ... P68919 41162373
    1055557 9rtv:W (3.6) BS01 rna N/A GO:0000027 ... P0A7L8 41162373
    1055558 9rtv:W (3.6) BS02 rna N/A GO:0000027 ... P0A7L8 41162373
    1055559 9rtv:X (3.6) BS01 rna N/A GO:0000027 ... P0A7M2 41162373
    1055560 9rtv:Y (3.6) BS01 rna N/A GO:0000027 ... P0A7M6 41162373
    1055561 9rtv:Z (3.6) BS01 rna N/A GO:0000027 ... P0AG51 41162373
    1055562 9rtv:Z (3.6) BS02 rna N/A GO:0000027 ... P0AG51 41162373
    1055563 9rtv:Z (3.6) BS03 MG N/A GO:0000027 ... P0AG51 41162373
    1055564 9rtv:b (3.6) BS01 rna N/A GO:0000028 ... P0A7V0 41162373
    1055565 9rtv:c (3.6) BS01 rna N/A GO:0000028 ... C3SQX2 41162373
    1055566 9rtv:d (3.6) BS01 rna N/A GO:0003723 ... C4ZUF1 41162373
    1055567 9rtv:e (3.6) BS01 rna N/A GO:0000028 ... P0A7W1 41162373
    1055568 9rtv:f (3.6) BS01 rna N/A GO:0002181 ... P02358 41162373
    1055569 9rtv:g (3.6) BS01 rna N/A GO:0000028 ... P02359 41162373
    1055570 9rtv:g (3.6) BS02 rna N/A GO:0000028 ... P02359 41162373
    1055571 9rtv:h (3.6) BS01 rna N/A GO:0000028 ... P0A7W7 41162373
    1055572 9rtv:i (3.6) BS01 rna N/A GO:0002181 ... P0A7X3 41162373
    1055573 9rtv:j (3.6) BS01 rna N/A GO:0000049 ... P0A7R5 41162373
    1055574 9rtv:k (3.6) BS01 rna N/A GO:0002181 ... P0A7R9 41162373
    1055575 9rtv:l (3.6) BS01 rna N/A GO:0000049 ... P0A7S3 41162373
    1055576 9rtv:m (3.6) BS01 rna N/A GO:0000049 ... P0A7S9 41162373
    1055577 9rtv:m (3.6) BS02 MG N/A GO:0000049 ... P0A7S9 41162373
    1055578 9rtv:n (3.6) BS01 rna N/A GO:0003735 ... P0AG59 41162373
    1055579 9rtv:n (3.6) BS02 MG N/A GO:0003735 ... P0AG59 41162373
    1055580 9rtv:o (3.6) BS01 rna N/A GO:0000028 ... P0ADZ4 41162373
    1055581 9rtv:o (3.6) BS02 rna N/A GO:0000028 ... P0ADZ4 41162373
    1055582 9rtv:p (3.6) BS01 rna N/A GO:0000028 ... P0A7T3 41162373
    1055583 9rtv:q (3.6) BS01 rna N/A GO:0000028 ... P0AG63 41162373
    1055584 9rtv:r (3.6) BS01 rna N/A GO:0002181 ... P0A7T7 41162373
    1055585 9rtv:s (3.6) BS01 rna N/A GO:0002181 ... P0A7U3 41162373
    1055586 9rtv:t (3.6) BS01 rna N/A GO:0000028 ... P0A7U7 41162373
    1055587 9rtv:u (3.6) BS01 rna N/A GO:0000028 ... P68679 41162373
    1055588 9rtv:x (3.6) BS01 rna N/A GO:0003746 ... C4ZUJ5 41162373
    1055589 9rtv:x (3.6) BS02 rna N/A GO:0003746 ... C4ZUJ5 41162373
    1055590 9rtv:x (3.6) BS03 GDP N/A GO:0003746 ... C4ZUJ5 41162373
    1055591 9rtv:x (3.6) BS04 MG N/A GO:0003746 ... C4ZUJ5 41162373
    1055592 9ru5:A (3.26) BS01 peptide N/A N/A N/A N/A
    1055593 9ru5:B (3.26) BS01 peptide N/A N/A N/A N/A
    1055594 9ru5:M (3.26) BS01 peptide N/A N/A F6IQR9 N/A
    1055595 9rub:A (2.6) BS01 RUB 4.1.1.39 GO:0000287 ... P04718 1905726
    1055596 9rub:B (2.6) BS01 RUB 4.1.1.39 GO:0000287 ... P04718 1905726
    1055597 9rub:B (2.6) BS02 MG 4.1.1.39 GO:0000287 ... P04718 1905726
    1055598 9rup:A (4.11) BS01 peptide N/A N/A N/A N/A
    1055599 9rup:C (4.11) BS01 peptide N/A N/A A0A0D6K978 N/A
    1055600 9rup:a (4.11) BS01 peptide N/A N/A N/A N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).