SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5271 5272 5273 5274 5275 5276 5277 5278 5279 5280 5281 5282 5283 5284 5285 5286 5287 5288 5289 5290 5291 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1056001 9s1q:B (2.0) BS02 PMP N/A N/A N/A 41652856
    1056002 9s1q:C (2.0) BS01 PMP N/A N/A N/A 41652856
    1056003 9s1q:C (2.0) BS02 PMP N/A N/A N/A 41652856
    1056004 9s1q:D (2.0) BS01 PMP N/A N/A N/A 41652856
    1056005 9s1q:D (2.0) BS02 PMP N/A N/A N/A 41652856
    1056006 9s1s:B (1.62) BS01 peptide N/A N/A Q6GQT0 41308992
    1056007 9s1u:A (2.0) BS01 A1JLE N/A GO:0004833 ... P14902 41310997
    1056008 9s1v:A (1.85) BS01 A1JLD N/A GO:0004833 ... P14902 41310997
    1056009 9s1w:A (2.1) BS01 A1JLB N/A GO:0004833 ... P14902 41310997
    1056010 9s1x:A (2.0) BS01 A1JLA N/A GO:0004833 ... P14902 41310997
    1056011 9s1z:A (1.1) BS01 A1JK7 N/A GO:0017136 ... Q8IXJ6 41165483
    1056012 9s1z:A (1.1) BS02 BU3 N/A GO:0017136 ... Q8IXJ6 41165483
    1056013 9s1z:A (1.1) BS03 ZN N/A GO:0017136 ... Q8IXJ6 41165483
    1056014 9s20:A (1.5) BS01 ZN N/A GO:0017136 ... Q8IXJ6 41165483
    1056015 9s20:A (1.5) BS02 BU3 N/A GO:0017136 ... Q8IXJ6 41165483
    1056016 9s20:A (1.5) BS03 A1JK0 N/A GO:0017136 ... Q8IXJ6 41165483
    1056017 9s21:A (1.55) BS01 ZN N/A GO:0017136 ... Q8IXJ6 41165483
    1056018 9s21:A (1.55) BS02 A1JK1 N/A GO:0017136 ... Q8IXJ6 41165483
    1056019 9s21:A (1.55) BS03 BU3 N/A GO:0017136 ... Q8IXJ6 41165483
    1056020 9s22:A (1.95) BS01 ZN N/A GO:0017136 ... Q8IXJ6 41165483
    1056021 9s22:A (1.95) BS02 A1JK2 N/A GO:0017136 ... Q8IXJ6 41165483
    1056022 9s23:A (2.3) BS01 peptide N/A GO:0017136 ... Q8IXJ6 41165483
    1056023 9s23:A (2.3) BS02 ZN N/A GO:0017136 ... Q8IXJ6 41165483
    1056024 9s23:A (2.3) BS03 A1JK5 N/A GO:0017136 ... Q8IXJ6 41165483
    1056025 9s24:A (2.1) BS01 peptide N/A GO:0017136 ... Q8IXJ6 41165483
    1056026 9s24:A (2.1) BS02 ZN N/A GO:0017136 ... Q8IXJ6 41165483
    1056027 9s24:A (2.1) BS03 A1JK4 N/A GO:0017136 ... Q8IXJ6 41165483
    1056028 9s25:A (2.1) BS01 peptide N/A GO:0017136 ... Q8IXJ6 41165483
    1056029 9s25:A (2.1) BS02 ZN N/A GO:0017136 ... Q8IXJ6 41165483
    1056030 9s25:A (2.1) BS03 A1JK3 N/A GO:0017136 ... Q8IXJ6 41165483
    1056031 9s26:A (2.3) BS01 peptide N/A GO:0017136 ... Q8IXJ6 41165483
    1056032 9s26:A (2.3) BS02 ZN N/A GO:0017136 ... Q8IXJ6 41165483
    1056033 9s26:A (2.3) BS03 A1JK8 N/A GO:0017136 ... Q8IXJ6 41165483
    1056034 9s27:A (1.6) BS01 peptide N/A GO:0017136 ... Q9NTG7 41165483
    1056035 9s27:A (1.6) BS02 ZN N/A GO:0017136 ... Q9NTG7 41165483
    1056036 9s27:A (1.6) BS03 BU3 N/A GO:0017136 ... Q9NTG7 41165483
    1056037 9s27:A (1.6) BS04 BU3 N/A GO:0017136 ... Q9NTG7 41165483
    1056038 9s27:A (1.6) BS05 A1JK8 N/A GO:0017136 ... Q9NTG7 41165483
    1056039 9s2t:A (2.24) BS01 FE N/A GO:0003824 ... Q9L9F4 N/A
    1056040 9s2v:A (2.38) BS01 ZN N/A GO:0000175 ... P0DTD1 40910582
    1056041 9s2v:A (2.38) BS02 ZN N/A GO:0000175 ... P0DTD1 40910582
    1056042 9s2v:A (2.38) BS03 ZN N/A GO:0000175 ... P0DTD1 40910582
    1056043 9s2v:A (2.38) BS04 SAH N/A GO:0000175 ... P0DTD1 40910582
    1056044 9s2v:A (2.38) BS05 A1JLH N/A GO:0000175 ... P0DTD1 40910582
    1056045 9s2v:B (2.38) BS01 ZN N/A GO:0000175 ... P0DTD1 40910582
    1056046 9s2v:B (2.38) BS02 ZN N/A GO:0000175 ... P0DTD1 40910582
    1056047 9s2v:B (2.38) BS03 ZN N/A GO:0000175 ... P0DTD1 40910582
    1056048 9s2v:B (2.38) BS04 SAH N/A GO:0000175 ... P0DTD1 40910582
    1056049 9s2v:B (2.38) BS05 A1JLH N/A GO:0000175 ... P0DTD1 40910582
    1056050 9s36:A (3.4) BS01 GDD N/A GO:0000139 ... Q5A477 40799752
    1056051 9s3a:A (2.3) BS01 A1I4U N/A GO:0004364 ... A0A3B5XZG4 40818610
    1056052 9s3a:A (2.3) BS02 A1I4T N/A GO:0004364 ... A0A3B5XZG4 40818610
    1056053 9s3a:B (2.3) BS01 A1I4U N/A GO:0004364 ... A0A3B5XZG4 40818610
    1056054 9s3b:CR (2.38) BS01 rna N/A GO:0002184 ... P62495 41577716
    1056055 9s3b:CR (2.38) BS02 rna N/A GO:0002184 ... P62495 41577716
    1056056 9s3b:CR (2.38) BS03 rna N/A GO:0002184 ... P62495 41577716
    1056057 9s3b:CR (2.38) BS04 rna N/A GO:0002184 ... P62495 41577716
    1056058 9s3b:CZ (2.38) BS01 rna N/A N/A N/A 41577716
    1056059 9s3b:CZ (2.38) BS02 rna N/A N/A N/A 41577716
    1056060 9s3b:LA (2.38) BS01 rna N/A GO:0002181 ... P62917 41577716
    1056061 9s3b:LA (2.38) BS02 rna N/A GO:0002181 ... P62917 41577716
    1056062 9s3b:LA (2.38) BS03 MG N/A GO:0002181 ... P62917 41577716
    1056063 9s3b:LB (2.38) BS01 rna N/A GO:0002181 ... P39023 41577716
    1056064 9s3b:LC (2.38) BS01 rna N/A GO:0002181 ... P36578 41577716
    1056065 9s3b:LC (2.38) BS02 rna N/A GO:0002181 ... P36578 41577716
    1056066 9s3b:LC (2.38) BS03 MG N/A GO:0002181 ... P36578 41577716
    1056067 9s3b:LD (2.38) BS01 rna N/A GO:0000027 ... P46777 41577716
    1056068 9s3b:LD (2.38) BS02 rna N/A GO:0000027 ... P46777 41577716
    1056069 9s3b:LE (2.38) BS01 rna N/A GO:0002181 ... Q02878 41577716
    1056070 9s3b:LF (2.38) BS01 rna N/A GO:0000463 ... P18124 41577716
    1056071 9s3b:LF (2.38) BS02 rna N/A GO:0000463 ... P18124 41577716
    1056072 9s3b:LG (2.38) BS01 rna N/A GO:0000470 ... P62424 41577716
    1056073 9s3b:LG (2.38) BS02 rna N/A GO:0000470 ... P62424 41577716
    1056074 9s3b:LH (2.38) BS01 rna N/A GO:0002181 ... P32969 41577716
    1056075 9s3b:LI (2.38) BS01 rna N/A GO:0000027 ... Q96L21 41577716
    1056076 9s3b:LI (2.38) BS02 rna N/A GO:0000027 ... Q96L21 41577716
    1056077 9s3b:LI (2.38) BS03 rna N/A GO:0000027 ... Q96L21 41577716
    1056078 9s3b:LJ (2.38) BS01 rna N/A GO:0000027 ... P62913 41577716
    1056079 9s3b:LJ (2.38) BS02 rna N/A GO:0000027 ... P62913 41577716
    1056080 9s3b:LJ (2.38) BS03 rna N/A GO:0000027 ... P62913 41577716
    1056081 9s3b:LL (2.38) BS01 rna N/A GO:0002181 ... P26373 41577716
    1056082 9s3b:LL (2.38) BS02 rna N/A GO:0002181 ... P26373 41577716
    1056083 9s3b:LM (2.38) BS01 rna N/A GO:0002181 ... P50914 41577716
    1056084 9s3b:LN (2.38) BS01 rna N/A GO:0002181 ... P61313 41577716
    1056085 9s3b:LN (2.38) BS02 rna N/A GO:0002181 ... P61313 41577716
    1056086 9s3b:LO (2.38) BS01 rna N/A GO:0002181 ... P40429 41577716
    1056087 9s3b:LP (2.38) BS01 rna N/A GO:0002181 ... P18621 41577716
    1056088 9s3b:LP (2.38) BS02 rna N/A GO:0002181 ... P18621 41577716
    1056089 9s3b:LQ (2.38) BS01 rna N/A GO:0002181 ... Q07020 41577716
    1056090 9s3b:LR (2.38) BS01 rna N/A GO:0002181 ... P84098 41577716
    1056091 9s3b:LR (2.38) BS02 rna N/A GO:0002181 ... P84098 41577716
    1056092 9s3b:LS (2.38) BS01 rna N/A GO:0002181 ... Q02543 41577716
    1056093 9s3b:LS (2.38) BS02 rna N/A GO:0002181 ... Q02543 41577716
    1056094 9s3b:LT (2.38) BS01 rna N/A GO:0001650 ... P46778 41577716
    1056095 9s3b:LT (2.38) BS02 rna N/A GO:0001650 ... P46778 41577716
    1056096 9s3b:LU (2.38) BS01 rna N/A GO:0002181 ... P35268 41577716
    1056097 9s3b:LV (2.38) BS01 rna N/A GO:0000122 ... P62829 41577716
    1056098 9s3b:LW (2.38) BS01 rna N/A GO:0002181 ... P83731 41577716
    1056099 9s3b:LX (2.38) BS01 rna N/A GO:0002181 ... P62750 41577716
    1056100 9s3b:LX (2.38) BS02 rna N/A GO:0002181 ... P62750 41577716
    1056101 9s3b:LY (2.38) BS01 rna N/A GO:0002181 ... P61254 41577716
    1056102 9s3b:LY (2.38) BS02 rna N/A GO:0002181 ... P61254 41577716
    1056103 9s3b:LZ (2.38) BS01 rna N/A GO:0002181 ... P61353 41577716
    1056104 9s3b:La (2.38) BS01 rna N/A GO:0002181 ... P46776 41577716
    1056105 9s3b:Lb (2.38) BS01 rna N/A GO:0002181 ... P47914 41577716
    1056106 9s3b:Lc (2.38) BS01 rna N/A GO:0002181 ... P62888 41577716
    1056107 9s3b:Ld (2.38) BS01 rna N/A GO:0002181 ... P62899 41577716
    1056108 9s3b:Le (2.38) BS01 rna N/A GO:0002181 ... P62910 41577716
    1056109 9s3b:Lf (2.38) BS01 rna N/A GO:0002181 ... P18077 41577716
    1056110 9s3b:Lg (2.38) BS01 rna N/A GO:0002181 ... P49207 41577716
    1056111 9s3b:Lg (2.38) BS02 ZN N/A GO:0002181 ... P49207 41577716
    1056112 9s3b:Lh (2.38) BS01 rna N/A GO:0000463 ... P42766 41577716
    1056113 9s3b:Lh (2.38) BS02 rna N/A GO:0000463 ... P42766 41577716
    1056114 9s3b:Li (2.38) BS01 rna N/A GO:0002181 ... Q9Y3U8 41577716
    1056115 9s3b:Lj (2.38) BS01 rna N/A GO:0000448 ... P61927 41577716
    1056116 9s3b:Lj (2.38) BS02 rna N/A GO:0000448 ... P61927 41577716
    1056117 9s3b:Lj (2.38) BS03 ZN N/A GO:0000448 ... P61927 41577716
    1056118 9s3b:Lk (2.38) BS01 rna N/A GO:0002181 ... P63173 41577716
    1056119 9s3b:Ll (2.38) BS01 rna N/A GO:0002181 ... P62891 41577716
    1056120 9s3b:Ll (2.38) BS02 rna N/A GO:0002181 ... P62891 41577716
    1056121 9s3b:Lm (2.38) BS01 rna N/A GO:0002181 ... P62987 41577716
    1056122 9s3b:Lm (2.38) BS02 ZN N/A GO:0002181 ... P62987 41577716
    1056123 9s3b:Lo (2.38) BS01 rna N/A GO:0002181 ... P83881 41577716
    1056124 9s3b:Lo (2.38) BS02 rna N/A GO:0002181 ... P83881 41577716
    1056125 9s3b:Lo (2.38) BS03 ZN N/A GO:0002181 ... P83881 41577716
    1056126 9s3b:Lp (2.38) BS01 rna N/A GO:0002181 ... P61513 41577716
    1056127 9s3b:Lp (2.38) BS02 ZN N/A GO:0002181 ... P61513 41577716
    1056128 9s3b:Lr (2.38) BS01 rna N/A GO:0002181 ... P46779 41577716
    1056129 9s3b:Ls (2.38) BS01 rna N/A GO:0002181 ... P05388 41577716
    1056130 9s3b:Lt (2.38) BS01 rna N/A GO:0002181 ... P30050 41577716
    1056131 9s3b:NA (2.38) BS01 rna N/A GO:0000122 ... Q13765 41577716
    1056132 9s3b:NB (2.38) BS01 rna N/A N/A P20290 41577716
    1056133 9s3b:SA (2.38) BS01 rna N/A GO:0000028 ... P08865 41577716
    1056134 9s3b:SB (2.38) BS01 rna N/A GO:0002181 ... P61247 41577716
    1056135 9s3b:SC (2.38) BS01 rna N/A GO:0002181 ... P15880 41577716
    1056136 9s3b:SD (2.38) BS01 rna N/A GO:0001228 ... P23396 41577716
    1056137 9s3b:SE (2.38) BS01 rna N/A GO:0002181 ... P62701 41577716
    1056138 9s3b:SF (2.38) BS01 rna N/A GO:0002181 ... P46782 41577716
    1056139 9s3b:SG (2.38) BS01 rna N/A GO:0002181 ... P62753 41577716
    1056140 9s3b:SH (2.38) BS01 rna N/A GO:0002181 ... P62081 41577716
    1056141 9s3b:SI (2.38) BS01 rna N/A GO:0002181 ... P62241 41577716
    1056142 9s3b:SI (2.38) BS02 rna N/A GO:0002181 ... P62241 41577716
    1056143 9s3b:SJ (2.38) BS01 rna N/A GO:0002181 ... P46781 41577716
    1056144 9s3b:SK (2.38) BS01 rna N/A GO:0002181 ... P46783 41577716
    1056145 9s3b:SL (2.38) BS01 rna N/A GO:0002181 ... P62280 41577716
    1056146 9s3b:SL (2.38) BS02 rna N/A GO:0002181 ... P62280 41577716
    1056147 9s3b:SM (2.38) BS01 rna N/A GO:0002181 ... P25398 41577716
    1056148 9s3b:SN (2.38) BS01 rna N/A GO:0000462 ... P62277 41577716
    1056149 9s3b:SO (2.38) BS01 rna N/A GO:0000028 ... P62263 41577716
    1056150 9s3b:SP (2.38) BS01 rna N/A GO:0000056 ... P62841 41577716
    1056151 9s3b:SQ (2.38) BS01 rna N/A GO:0000462 ... P62249 41577716
    1056152 9s3b:SR (2.38) BS01 rna N/A GO:0002181 ... P08708 41577716
    1056153 9s3b:SS (2.38) BS01 rna N/A GO:0002181 ... P62269 41577716
    1056154 9s3b:ST (2.38) BS01 rna N/A GO:0000028 ... P39019 41577716
    1056155 9s3b:SU (2.38) BS01 rna N/A GO:0002181 ... P60866 41577716
    1056156 9s3b:SW (2.38) BS01 rna N/A GO:0002181 ... P62244 41577716
    1056157 9s3b:SX (2.38) BS01 rna N/A GO:0002181 ... P62266 41577716
    1056158 9s3b:SY (2.38) BS01 rna N/A GO:0002181 ... P62847 41577716
    1056159 9s3b:SZ (2.38) BS01 rna N/A GO:0002181 ... P62851 41577716
    1056160 9s3b:Sa (2.38) BS01 rna N/A GO:0002181 ... P62854 41577716
    1056161 9s3b:Sa (2.38) BS02 ZN N/A GO:0002181 ... P62854 41577716
    1056162 9s3b:Sb (2.38) BS01 rna N/A GO:0002181 ... P42677 41577716
    1056163 9s3b:Sc (2.38) BS01 rna N/A GO:0000028 ... P62857 41577716
    1056164 9s3b:Sd (2.38) BS01 rna N/A GO:0002181 ... P62273 41577716
    1056165 9s3b:Sd (2.38) BS02 ZN N/A GO:0002181 ... P62273 41577716
    1056166 9s3b:Se (2.38) BS01 rna N/A GO:0002181 ... P62861 41577716
    1056167 9s3b:Sf (2.38) BS01 rna N/A GO:0002181 ... P62979 41577716
    1056168 9s3b:Sg (2.38) BS01 rna N/A GO:0001891 ... P63244 41577716
    1056169 9s3c:CR (2.42) BS01 rna N/A GO:0002184 ... P62495 41577716
    1056170 9s3c:CR (2.42) BS02 rna N/A GO:0002184 ... P62495 41577716
    1056171 9s3c:CR (2.42) BS03 rna N/A GO:0002184 ... P62495 41577716
    1056172 9s3c:CR (2.42) BS04 rna N/A GO:0002184 ... P62495 41577716
    1056173 9s3c:CZ (2.42) BS01 rna N/A N/A N/A 41577716
    1056174 9s3c:CZ (2.42) BS02 rna N/A N/A N/A 41577716
    1056175 9s3c:LA (2.42) BS01 rna N/A GO:0002181 ... P62917 41577716
    1056176 9s3c:LA (2.42) BS02 rna N/A GO:0002181 ... P62917 41577716
    1056177 9s3c:LA (2.42) BS03 MG N/A GO:0002181 ... P62917 41577716
    1056178 9s3c:LB (2.42) BS01 rna N/A GO:0002181 ... P39023 41577716
    1056179 9s3c:LC (2.42) BS01 rna N/A GO:0002181 ... P36578 41577716
    1056180 9s3c:LC (2.42) BS02 rna N/A GO:0002181 ... P36578 41577716
    1056181 9s3c:LD (2.42) BS01 rna N/A GO:0000027 ... P46777 41577716
    1056182 9s3c:LD (2.42) BS02 rna N/A GO:0000027 ... P46777 41577716
    1056183 9s3c:LE (2.42) BS01 rna N/A GO:0002181 ... Q02878 41577716
    1056184 9s3c:LF (2.42) BS01 rna N/A GO:0000463 ... P18124 41577716
    1056185 9s3c:LF (2.42) BS02 rna N/A GO:0000463 ... P18124 41577716
    1056186 9s3c:LG (2.42) BS01 rna N/A GO:0000470 ... P62424 41577716
    1056187 9s3c:LG (2.42) BS02 rna N/A GO:0000470 ... P62424 41577716
    1056188 9s3c:LH (2.42) BS01 rna N/A GO:0002181 ... P32969 41577716
    1056189 9s3c:LI (2.42) BS01 rna N/A GO:0000027 ... Q96L21 41577716
    1056190 9s3c:LI (2.42) BS02 rna N/A GO:0000027 ... Q96L21 41577716
    1056191 9s3c:LI (2.42) BS03 rna N/A GO:0000027 ... Q96L21 41577716
    1056192 9s3c:LJ (2.42) BS01 rna N/A GO:0000027 ... P62913 41577716
    1056193 9s3c:LJ (2.42) BS02 rna N/A GO:0000027 ... P62913 41577716
    1056194 9s3c:LJ (2.42) BS03 rna N/A GO:0000027 ... P62913 41577716
    1056195 9s3c:LL (2.42) BS01 rna N/A GO:0002181 ... P26373 41577716
    1056196 9s3c:LL (2.42) BS02 rna N/A GO:0002181 ... P26373 41577716
    1056197 9s3c:LM (2.42) BS01 rna N/A GO:0002181 ... P50914 41577716
    1056198 9s3c:LN (2.42) BS01 rna N/A GO:0002181 ... P61313 41577716
    1056199 9s3c:LN (2.42) BS02 rna N/A GO:0002181 ... P61313 41577716
    1056200 9s3c:LO (2.42) BS01 rna N/A GO:0002181 ... P40429 41577716

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).