SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1056201 9s3c:LP (2.42) BS01 rna N/A GO:0002181 ... P18621 41577716
    1056202 9s3c:LP (2.42) BS02 rna N/A GO:0002181 ... P18621 41577716
    1056203 9s3c:LQ (2.42) BS01 rna N/A GO:0002181 ... Q07020 41577716
    1056204 9s3c:LR (2.42) BS01 rna N/A GO:0002181 ... P84098 41577716
    1056205 9s3c:LR (2.42) BS02 rna N/A GO:0002181 ... P84098 41577716
    1056206 9s3c:LS (2.42) BS01 rna N/A GO:0002181 ... Q02543 41577716
    1056207 9s3c:LS (2.42) BS02 rna N/A GO:0002181 ... Q02543 41577716
    1056208 9s3c:LT (2.42) BS01 rna N/A GO:0001650 ... P46778 41577716
    1056209 9s3c:LT (2.42) BS02 rna N/A GO:0001650 ... P46778 41577716
    1056210 9s3c:LU (2.42) BS01 rna N/A GO:0002181 ... P35268 41577716
    1056211 9s3c:LV (2.42) BS01 rna N/A GO:0000122 ... P62829 41577716
    1056212 9s3c:LW (2.42) BS01 rna N/A GO:0002181 ... P83731 41577716
    1056213 9s3c:LX (2.42) BS01 rna N/A GO:0002181 ... P62750 41577716
    1056214 9s3c:LX (2.42) BS02 rna N/A GO:0002181 ... P62750 41577716
    1056215 9s3c:LY (2.42) BS01 rna N/A GO:0002181 ... P61254 41577716
    1056216 9s3c:LY (2.42) BS02 rna N/A GO:0002181 ... P61254 41577716
    1056217 9s3c:LZ (2.42) BS01 rna N/A GO:0002181 ... P61353 41577716
    1056218 9s3c:La (2.42) BS01 rna N/A GO:0002181 ... P46776 41577716
    1056219 9s3c:Lb (2.42) BS01 rna N/A GO:0002181 ... P47914 41577716
    1056220 9s3c:Lc (2.42) BS01 rna N/A GO:0002181 ... P62888 41577716
    1056221 9s3c:Ld (2.42) BS01 rna N/A GO:0002181 ... P62899 41577716
    1056222 9s3c:Le (2.42) BS01 rna N/A GO:0002181 ... P62910 41577716
    1056223 9s3c:Lf (2.42) BS01 rna N/A GO:0002181 ... P18077 41577716
    1056224 9s3c:Lg (2.42) BS01 rna N/A GO:0002181 ... P49207 41577716
    1056225 9s3c:Lg (2.42) BS02 ZN N/A GO:0002181 ... P49207 41577716
    1056226 9s3c:Lh (2.42) BS01 rna N/A GO:0000463 ... P42766 41577716
    1056227 9s3c:Lh (2.42) BS02 rna N/A GO:0000463 ... P42766 41577716
    1056228 9s3c:Li (2.42) BS01 rna N/A GO:0002181 ... Q9Y3U8 41577716
    1056229 9s3c:Lj (2.42) BS01 rna N/A GO:0000448 ... P61927 41577716
    1056230 9s3c:Lj (2.42) BS02 rna N/A GO:0000448 ... P61927 41577716
    1056231 9s3c:Lj (2.42) BS03 ZN N/A GO:0000448 ... P61927 41577716
    1056232 9s3c:Lk (2.42) BS01 rna N/A GO:0002181 ... P63173 41577716
    1056233 9s3c:Ll (2.42) BS01 rna N/A GO:0002181 ... P62891 41577716
    1056234 9s3c:Ll (2.42) BS02 rna N/A GO:0002181 ... P62891 41577716
    1056235 9s3c:Lm (2.42) BS01 rna N/A GO:0002181 ... P62987 41577716
    1056236 9s3c:Lm (2.42) BS02 ZN N/A GO:0002181 ... P62987 41577716
    1056237 9s3c:Lo (2.42) BS01 rna N/A GO:0002181 ... P83881 41577716
    1056238 9s3c:Lo (2.42) BS02 ZN N/A GO:0002181 ... P83881 41577716
    1056239 9s3c:Lp (2.42) BS01 rna N/A GO:0002181 ... P61513 41577716
    1056240 9s3c:Lp (2.42) BS02 ZN N/A GO:0002181 ... P61513 41577716
    1056241 9s3c:Lr (2.42) BS01 rna N/A GO:0002181 ... P46779 41577716
    1056242 9s3c:Ls (2.42) BS01 rna N/A GO:0002181 ... P05388 41577716
    1056243 9s3c:Lt (2.42) BS01 rna N/A GO:0002181 ... P30050 41577716
    1056244 9s3c:NB (2.42) BS01 rna N/A N/A P20290 41577716
    1056245 9s3c:SA (2.42) BS01 rna N/A GO:0000028 ... P08865 41577716
    1056246 9s3c:SB (2.42) BS01 rna N/A GO:0002181 ... P61247 41577716
    1056247 9s3c:SC (2.42) BS01 rna N/A GO:0002181 ... P15880 41577716
    1056248 9s3c:SD (2.42) BS01 rna N/A GO:0001228 ... P23396 41577716
    1056249 9s3c:SE (2.42) BS01 rna N/A GO:0002181 ... P62701 41577716
    1056250 9s3c:SF (2.42) BS01 rna N/A GO:0002181 ... P46782 41577716
    1056251 9s3c:SG (2.42) BS01 rna N/A GO:0002181 ... P62753 41577716
    1056252 9s3c:SH (2.42) BS01 rna N/A GO:0002181 ... P62081 41577716
    1056253 9s3c:SI (2.42) BS01 rna N/A GO:0002181 ... P62241 41577716
    1056254 9s3c:SI (2.42) BS02 rna N/A GO:0002181 ... P62241 41577716
    1056255 9s3c:SJ (2.42) BS01 rna N/A GO:0002181 ... P46781 41577716
    1056256 9s3c:SK (2.42) BS01 rna N/A GO:0002181 ... P46783 41577716
    1056257 9s3c:SL (2.42) BS01 rna N/A GO:0002181 ... P62280 41577716
    1056258 9s3c:SL (2.42) BS02 rna N/A GO:0002181 ... P62280 41577716
    1056259 9s3c:SM (2.42) BS01 rna N/A GO:0002181 ... P25398 41577716
    1056260 9s3c:SN (2.42) BS01 rna N/A GO:0000462 ... P62277 41577716
    1056261 9s3c:SO (2.42) BS01 rna N/A GO:0000028 ... P62263 41577716
    1056262 9s3c:SP (2.42) BS01 rna N/A GO:0000056 ... P62841 41577716
    1056263 9s3c:SQ (2.42) BS01 rna N/A GO:0000462 ... P62249 41577716
    1056264 9s3c:SR (2.42) BS01 rna N/A GO:0002181 ... P08708 41577716
    1056265 9s3c:SS (2.42) BS01 rna N/A GO:0002181 ... P62269 41577716
    1056266 9s3c:ST (2.42) BS01 rna N/A GO:0000028 ... P39019 41577716
    1056267 9s3c:SU (2.42) BS01 rna N/A GO:0002181 ... P60866 41577716
    1056268 9s3c:SW (2.42) BS01 rna N/A GO:0002181 ... P62244 41577716
    1056269 9s3c:SX (2.42) BS01 rna N/A GO:0002181 ... P62266 41577716
    1056270 9s3c:SY (2.42) BS01 rna N/A GO:0002181 ... P62847 41577716
    1056271 9s3c:SZ (2.42) BS01 rna N/A GO:0002181 ... P62851 41577716
    1056272 9s3c:Sa (2.42) BS01 rna N/A GO:0002181 ... P62854 41577716
    1056273 9s3c:Sa (2.42) BS02 ZN N/A GO:0002181 ... P62854 41577716
    1056274 9s3c:Sb (2.42) BS01 rna N/A GO:0002181 ... P42677 41577716
    1056275 9s3c:Sc (2.42) BS01 rna N/A GO:0000028 ... P62857 41577716
    1056276 9s3c:Sd (2.42) BS01 rna N/A GO:0002181 ... P62273 41577716
    1056277 9s3c:Sd (2.42) BS02 ZN N/A GO:0002181 ... P62273 41577716
    1056278 9s3c:Se (2.42) BS01 rna N/A GO:0002181 ... P62861 41577716
    1056279 9s3c:Sf (2.42) BS01 rna N/A GO:0002181 ... P62979 41577716
    1056280 9s3c:Sg (2.42) BS01 rna N/A GO:0001891 ... P63244 41577716
    1056281 9s3d:CR (2.32) BS01 rna N/A GO:0002184 ... P62495 41577716
    1056282 9s3d:CR (2.32) BS02 rna N/A GO:0002184 ... P62495 41577716
    1056283 9s3d:CR (2.32) BS03 rna N/A GO:0002184 ... P62495 41577716
    1056284 9s3d:CR (2.32) BS04 rna N/A GO:0002184 ... P62495 41577716
    1056285 9s3d:CZ (2.32) BS01 rna N/A N/A N/A 41577716
    1056286 9s3d:LA (2.32) BS01 rna N/A GO:0002181 ... P62917 41577716
    1056287 9s3d:LA (2.32) BS02 rna N/A GO:0002181 ... P62917 41577716
    1056288 9s3d:LA (2.32) BS03 MG N/A GO:0002181 ... P62917 41577716
    1056289 9s3d:LB (2.32) BS01 rna N/A GO:0002181 ... P39023 41577716
    1056290 9s3d:LC (2.32) BS01 rna N/A GO:0002181 ... P36578 41577716
    1056291 9s3d:LC (2.32) BS02 rna N/A GO:0002181 ... P36578 41577716
    1056292 9s3d:LD (2.32) BS01 rna N/A GO:0000027 ... P46777 41577716
    1056293 9s3d:LD (2.32) BS02 rna N/A GO:0000027 ... P46777 41577716
    1056294 9s3d:LE (2.32) BS01 rna N/A GO:0002181 ... Q02878 41577716
    1056295 9s3d:LF (2.32) BS01 rna N/A GO:0000463 ... P18124 41577716
    1056296 9s3d:LF (2.32) BS02 rna N/A GO:0000463 ... P18124 41577716
    1056297 9s3d:LG (2.32) BS01 rna N/A GO:0000470 ... P62424 41577716
    1056298 9s3d:LG (2.32) BS02 rna N/A GO:0000470 ... P62424 41577716
    1056299 9s3d:LH (2.32) BS01 rna N/A GO:0002181 ... P32969 41577716
    1056300 9s3d:LI (2.32) BS01 rna N/A GO:0000027 ... Q96L21 41577716
    1056301 9s3d:LI (2.32) BS02 rna N/A GO:0000027 ... Q96L21 41577716
    1056302 9s3d:LI (2.32) BS03 rna N/A GO:0000027 ... Q96L21 41577716
    1056303 9s3d:LJ (2.32) BS01 rna N/A GO:0000027 ... P62913 41577716
    1056304 9s3d:LJ (2.32) BS02 rna N/A GO:0000027 ... P62913 41577716
    1056305 9s3d:LJ (2.32) BS03 rna N/A GO:0000027 ... P62913 41577716
    1056306 9s3d:LL (2.32) BS01 rna N/A GO:0002181 ... P26373 41577716
    1056307 9s3d:LL (2.32) BS02 rna N/A GO:0002181 ... P26373 41577716
    1056308 9s3d:LM (2.32) BS01 rna N/A GO:0002181 ... P50914 41577716
    1056309 9s3d:LN (2.32) BS01 rna N/A GO:0002181 ... P61313 41577716
    1056310 9s3d:LN (2.32) BS02 rna N/A GO:0002181 ... P61313 41577716
    1056311 9s3d:LO (2.32) BS01 rna N/A GO:0002181 ... P40429 41577716
    1056312 9s3d:LP (2.32) BS01 rna N/A GO:0002181 ... P18621 41577716
    1056313 9s3d:LP (2.32) BS02 rna N/A GO:0002181 ... P18621 41577716
    1056314 9s3d:LQ (2.32) BS01 rna N/A GO:0002181 ... Q07020 41577716
    1056315 9s3d:LR (2.32) BS01 rna N/A GO:0002181 ... P84098 41577716
    1056316 9s3d:LR (2.32) BS02 rna N/A GO:0002181 ... P84098 41577716
    1056317 9s3d:LS (2.32) BS01 rna N/A GO:0002181 ... Q02543 41577716
    1056318 9s3d:LS (2.32) BS02 rna N/A GO:0002181 ... Q02543 41577716
    1056319 9s3d:LT (2.32) BS01 rna N/A GO:0001650 ... P46778 41577716
    1056320 9s3d:LT (2.32) BS02 rna N/A GO:0001650 ... P46778 41577716
    1056321 9s3d:LU (2.32) BS01 rna N/A GO:0002181 ... P35268 41577716
    1056322 9s3d:LV (2.32) BS01 rna N/A GO:0000122 ... P62829 41577716
    1056323 9s3d:LW (2.32) BS01 rna N/A GO:0002181 ... P83731 41577716
    1056324 9s3d:LX (2.32) BS01 rna N/A GO:0002181 ... P62750 41577716
    1056325 9s3d:LX (2.32) BS02 rna N/A GO:0002181 ... P62750 41577716
    1056326 9s3d:LY (2.32) BS01 rna N/A GO:0002181 ... P61254 41577716
    1056327 9s3d:LY (2.32) BS02 rna N/A GO:0002181 ... P61254 41577716
    1056328 9s3d:LZ (2.32) BS01 rna N/A GO:0002181 ... P61353 41577716
    1056329 9s3d:La (2.32) BS01 rna N/A GO:0002181 ... P46776 41577716
    1056330 9s3d:Lb (2.32) BS01 rna N/A GO:0002181 ... P47914 41577716
    1056331 9s3d:Lc (2.32) BS01 rna N/A GO:0002181 ... P62888 41577716
    1056332 9s3d:Ld (2.32) BS01 rna N/A GO:0002181 ... P62899 41577716
    1056333 9s3d:Le (2.32) BS01 rna N/A GO:0002181 ... P62910 41577716
    1056334 9s3d:Lf (2.32) BS01 rna N/A GO:0002181 ... P18077 41577716
    1056335 9s3d:Lg (2.32) BS01 rna N/A GO:0002181 ... P49207 41577716
    1056336 9s3d:Lg (2.32) BS02 ZN N/A GO:0002181 ... P49207 41577716
    1056337 9s3d:Lh (2.32) BS01 rna N/A GO:0000463 ... P42766 41577716
    1056338 9s3d:Lh (2.32) BS02 rna N/A GO:0000463 ... P42766 41577716
    1056339 9s3d:Li (2.32) BS01 rna N/A GO:0002181 ... Q9Y3U8 41577716
    1056340 9s3d:Lj (2.32) BS01 rna N/A GO:0000448 ... P61927 41577716
    1056341 9s3d:Lj (2.32) BS02 rna N/A GO:0000448 ... P61927 41577716
    1056342 9s3d:Lj (2.32) BS03 ZN N/A GO:0000448 ... P61927 41577716
    1056343 9s3d:Lk (2.32) BS01 rna N/A GO:0002181 ... P63173 41577716
    1056344 9s3d:Ll (2.32) BS01 rna N/A GO:0002181 ... P62891 41577716
    1056345 9s3d:Ll (2.32) BS02 rna N/A GO:0002181 ... P62891 41577716
    1056346 9s3d:Lm (2.32) BS01 rna N/A GO:0002181 ... P62987 41577716
    1056347 9s3d:Lm (2.32) BS02 ZN N/A GO:0002181 ... P62987 41577716
    1056348 9s3d:Lo (2.32) BS01 rna N/A GO:0002181 ... P83881 41577716
    1056349 9s3d:Lo (2.32) BS02 rna N/A GO:0002181 ... P83881 41577716
    1056350 9s3d:Lo (2.32) BS03 ZN N/A GO:0002181 ... P83881 41577716
    1056351 9s3d:Lp (2.32) BS01 rna N/A GO:0002181 ... P61513 41577716
    1056352 9s3d:Lp (2.32) BS02 ZN N/A GO:0002181 ... P61513 41577716
    1056353 9s3d:Lr (2.32) BS01 rna N/A GO:0002181 ... P46779 41577716
    1056354 9s3d:Ls (2.32) BS01 rna N/A GO:0002181 ... P05388 41577716
    1056355 9s3d:Lt (2.32) BS01 rna N/A GO:0002181 ... P30050 41577716
    1056356 9s3d:NB (2.32) BS01 rna N/A N/A P20290 41577716
    1056357 9s3d:SA (2.32) BS01 rna N/A GO:0000028 ... P08865 41577716
    1056358 9s3d:SB (2.32) BS01 rna N/A GO:0002181 ... P61247 41577716
    1056359 9s3d:SC (2.32) BS01 rna N/A GO:0002181 ... P15880 41577716
    1056360 9s3d:SD (2.32) BS01 rna N/A GO:0001228 ... P23396 41577716
    1056361 9s3d:SE (2.32) BS01 rna N/A GO:0002181 ... P62701 41577716
    1056362 9s3d:SF (2.32) BS01 rna N/A GO:0002181 ... P46782 41577716
    1056363 9s3d:SG (2.32) BS01 rna N/A GO:0002181 ... P62753 41577716
    1056364 9s3d:SH (2.32) BS01 rna N/A GO:0002181 ... P62081 41577716
    1056365 9s3d:SI (2.32) BS01 rna N/A GO:0002181 ... P62241 41577716
    1056366 9s3d:SI (2.32) BS02 rna N/A GO:0002181 ... P62241 41577716
    1056367 9s3d:SJ (2.32) BS01 rna N/A GO:0002181 ... P46781 41577716
    1056368 9s3d:SK (2.32) BS01 rna N/A GO:0002181 ... P46783 41577716
    1056369 9s3d:SL (2.32) BS01 rna N/A GO:0002181 ... P62280 41577716
    1056370 9s3d:SL (2.32) BS02 rna N/A GO:0002181 ... P62280 41577716
    1056371 9s3d:SM (2.32) BS01 rna N/A GO:0002181 ... P25398 41577716
    1056372 9s3d:SN (2.32) BS01 rna N/A GO:0000462 ... P62277 41577716
    1056373 9s3d:SO (2.32) BS01 rna N/A GO:0000028 ... P62263 41577716
    1056374 9s3d:SP (2.32) BS01 rna N/A GO:0000056 ... P62841 41577716
    1056375 9s3d:SQ (2.32) BS01 rna N/A GO:0000462 ... P62249 41577716
    1056376 9s3d:SR (2.32) BS01 rna N/A GO:0002181 ... P08708 41577716
    1056377 9s3d:SS (2.32) BS01 rna N/A GO:0002181 ... P62269 41577716
    1056378 9s3d:ST (2.32) BS01 rna N/A GO:0000028 ... P39019 41577716
    1056379 9s3d:SU (2.32) BS01 rna N/A GO:0002181 ... P60866 41577716
    1056380 9s3d:SW (2.32) BS01 rna N/A GO:0002181 ... P62244 41577716
    1056381 9s3d:SX (2.32) BS01 rna N/A GO:0002181 ... P62266 41577716
    1056382 9s3d:SY (2.32) BS01 rna N/A GO:0002181 ... P62847 41577716
    1056383 9s3d:SZ (2.32) BS01 rna N/A GO:0002181 ... P62851 41577716
    1056384 9s3d:Sa (2.32) BS01 rna N/A GO:0002181 ... P62854 41577716
    1056385 9s3d:Sa (2.32) BS02 ZN N/A GO:0002181 ... P62854 41577716
    1056386 9s3d:Sb (2.32) BS01 rna N/A GO:0002181 ... P42677 41577716
    1056387 9s3d:Sc (2.32) BS01 rna N/A GO:0000028 ... P62857 41577716
    1056388 9s3d:Sd (2.32) BS01 rna N/A GO:0002181 ... P62273 41577716
    1056389 9s3d:Sd (2.32) BS02 ZN N/A GO:0002181 ... P62273 41577716
    1056390 9s3d:Se (2.32) BS01 rna N/A GO:0002181 ... P62861 41577716
    1056391 9s3d:Sf (2.32) BS01 rna N/A GO:0002181 ... P62979 41577716
    1056392 9s3d:Sg (2.32) BS01 rna N/A GO:0001891 ... P63244 41577716
    1056393 9s3g:A (6.4) BS01 dna N/A GO:0001172 ... A0A8D1DPV6 41162378
    1056394 9s3g:A (6.4) BS02 rna N/A GO:0001172 ... A0A8D1DPV6 41162378
    1056395 9s3g:A (6.4) BS03 dna N/A GO:0001172 ... A0A8D1DPV6 41162378
    1056396 9s3g:A (6.4) BS04 ZN N/A GO:0001172 ... A0A8D1DPV6 41162378
    1056397 9s3g:A (6.4) BS05 ZN N/A GO:0001172 ... A0A8D1DPV6 41162378
    1056398 9s3g:A (6.4) BS06 MG N/A GO:0001172 ... A0A8D1DPV6 41162378
    1056399 9s3g:B (6.4) BS01 rna N/A GO:0000781 ... I3LGP4 41162378
    1056400 9s3g:B (6.4) BS02 dna N/A GO:0000781 ... I3LGP4 41162378

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).