SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1056601 9s90:A (2.61) BS01 MAN N/A N/A Q9LJF3 N/A
    1056602 9s90:A (2.61) BS02 MAN N/A N/A Q9LJF3 N/A
    1056603 9s90:A (2.61) BS03 A1JME N/A N/A Q9LJF3 N/A
    1056604 9s90:B (2.61) BS01 MAN N/A N/A Q9LJF3 N/A
    1056605 9s90:B (2.61) BS02 MAN N/A N/A Q9LJF3 N/A
    1056606 9s90:B (2.61) BS03 A1JME N/A N/A Q9LJF3 N/A
    1056607 9s96:A (2.31) BS01 MAN N/A N/A Q9LJF3 N/A
    1056608 9s96:A (2.31) BS02 MAN N/A N/A Q9LJF3 N/A
    1056609 9s96:A (2.31) BS03 MAN N/A N/A Q9LJF3 N/A
    1056610 9s96:A (2.31) BS04 A1JMF N/A N/A Q9LJF3 N/A
    1056611 9s96:B (2.31) BS01 MAN N/A N/A Q9LJF3 N/A
    1056612 9s96:B (2.31) BS02 MAN N/A N/A Q9LJF3 N/A
    1056613 9s96:B (2.31) BS03 A1JMF N/A N/A Q9LJF3 N/A
    1056614 9s99:B (3.98) BS01 peptide N/A N/A Q4J8Y4 41543908
    1056615 9s99:C (3.98) BS01 peptide N/A N/A Q4J8Y4 41543908
    1056616 9s9a:A (3.2) BS01 MAN N/A N/A Q9LJF3 N/A
    1056617 9s9a:A (3.2) BS02 MAN N/A N/A Q9LJF3 N/A
    1056618 9s9a:A (3.2) BS03 A1JMI N/A N/A Q9LJF3 N/A
    1056619 9s9a:B (3.2) BS01 MAN N/A N/A Q9LJF3 N/A
    1056620 9s9a:B (3.2) BS02 MAN N/A N/A Q9LJF3 N/A
    1056621 9s9a:B (3.2) BS03 A1JMI N/A N/A Q9LJF3 N/A
    1056622 9s9l:A (1.38) BS01 ZN N/A N/A P04637 41748563
    1056623 9s9l:A (1.38) BS02 A1JMS N/A N/A P04637 41748563
    1056624 9s9l:B (1.38) BS01 A1JMS N/A N/A P04637 41748563
    1056625 9s9l:B (1.38) BS02 ZN N/A N/A P04637 41748563
    1056626 9s9m:A (1.83) BS01 A1JMO N/A N/A P04637 41748563
    1056627 9s9m:A (1.83) BS02 ZN N/A N/A P04637 41748563
    1056628 9s9m:B (1.83) BS01 A1JMO N/A N/A P04637 41748563
    1056629 9s9m:B (1.83) BS02 ZN N/A N/A P04637 41748563
    1056630 9s9n:A (1.72) BS01 A1JMP N/A N/A P04637 41748563
    1056631 9s9n:A (1.72) BS02 ZN N/A N/A P04637 41748563
    1056632 9s9n:B (1.72) BS01 A1JMP N/A N/A P04637 41748563
    1056633 9s9n:B (1.72) BS02 ZN N/A N/A P04637 41748563
    1056634 9s9o:A (1.49) BS01 ZN N/A N/A P04637 41748563
    1056635 9s9o:A (1.49) BS02 A1JMR N/A N/A P04637 41748563
    1056636 9s9o:B (1.49) BS01 ZN N/A N/A P04637 41748563
    1056637 9s9o:B (1.49) BS02 A1JMR N/A N/A P04637 41748563
    1056638 9s9p:A (1.4) BS01 ZN N/A N/A P04637 41748563
    1056639 9s9p:A (1.4) BS02 A1JMR N/A N/A P04637 41748563
    1056640 9s9p:B (1.4) BS01 ZN N/A N/A P04637 41748563
    1056641 9s9p:B (1.4) BS02 A1JMR N/A N/A P04637 41748563
    1056642 9s9q:A (1.87) BS01 ZN N/A N/A P04637 41748563
    1056643 9s9q:A (1.87) BS02 A1JMR N/A N/A P04637 41748563
    1056644 9s9q:B (1.87) BS01 ZN N/A N/A P04637 41748563
    1056645 9s9q:B (1.87) BS02 A1JMR N/A N/A P04637 41748563
    1056646 9s9r:A (1.7) BS01 ZN N/A N/A P04637 41748563
    1056647 9s9r:B (1.7) BS01 ZN N/A N/A P04637 41748563
    1056648 9s9t:A (3.425) BS01 LY4 N/A GO:0004672 ... P05771 41091072
    1056649 9sa1:A (1.056) BS01 ZN N/A N/A Q8WY64 N/A
    1056650 9sa1:A (1.056) BS02 ZN N/A N/A Q8WY64 N/A
    1056651 9sa1:B (1.056) BS01 ZN N/A N/A Q8WY64 N/A
    1056652 9sa1:B (1.056) BS02 ZN N/A N/A Q8WY64 N/A
    1056653 9sa2:A (1.1) BS01 ZN N/A N/A Q8WY64 N/A
    1056654 9sa2:A (1.1) BS02 ZN N/A N/A Q8WY64 N/A
    1056655 9sa2:B (1.1) BS01 ZN N/A N/A Q8WY64 N/A
    1056656 9sa2:B (1.1) BS02 ZN N/A N/A Q8WY64 N/A
    1056657 9sa2:C (1.1) BS01 ZN N/A N/A Q8WY64 N/A
    1056658 9sa2:C (1.1) BS02 ZN N/A N/A Q8WY64 N/A
    1056659 9sa2:D (1.1) BS01 ZN N/A N/A Q8WY64 N/A
    1056660 9sa2:D (1.1) BS02 ZN N/A N/A Q8WY64 N/A
    1056661 9sa7:A (2.8) BS01 NDP N/A GO:0004459 ... Q60176 41274549
    1056662 9sa7:B (2.8) BS01 NDP N/A GO:0004459 ... Q60176 41274549
    1056663 9sa7:C (2.8) BS01 NDP N/A GO:0004459 ... Q60176 41274549
    1056664 9sa7:D (2.8) BS01 NDP N/A GO:0004459 ... Q60176 41274549
    1056665 9sa9:A (1.6) BS01 peptide N/A GO:0001836 ... P31947 41414041
    1056666 9sa9:A (1.6) BS02 CA N/A GO:0001836 ... P31947 41414041
    1056667 9sa9:L (1.6) BS01 peptide N/A GO:0001836 ... P31947 41414041
    1056668 9sa9:L (1.6) BS02 CA N/A GO:0001836 ... P31947 41414041
    1056669 9sab:A (1.5) BS01 peptide N/A GO:0001836 ... P31947 41414041
    1056670 9sab:A (1.5) BS02 CA N/A GO:0001836 ... P31947 41414041
    1056671 9sab:B (1.5) BS01 peptide N/A GO:0001836 ... P31947 41414041
    1056672 9sac:A (2.5) BS01 peptide N/A GO:0001836 ... P31947 41414041
    1056673 9sac:A (2.5) BS02 peptide N/A GO:0001836 ... P31947 41414041
    1056674 9sae:A (2.3) BS01 peptide N/A GO:0001836 ... P31947 41414041
    1056675 9sae:A (2.3) BS02 peptide N/A GO:0001836 ... P31947 41414041
    1056676 9sae:A (2.3) BS03 CA N/A GO:0001836 ... P31947 41414041
    1056677 9saf:B (2.55) BS01 ZN N/A GO:0005515 ... Q96SW2 40937862
    1056678 9saf:B (2.55) BS02 A1JM8 N/A GO:0005515 ... Q96SW2 40937862
    1056679 9saf:C (2.55) BS01 A1JM8 N/A N/A O60885 40937862
    1056680 9sai:B (2.66) BS01 ZN N/A GO:0005515 ... Q96SW2 40937862
    1056681 9sai:B (2.66) BS02 A1JM3 N/A GO:0005515 ... Q96SW2 40937862
    1056682 9sai:C (2.66) BS01 A1JM3 N/A N/A O60885 40937862
    1056683 9saj:A (2.48) BS01 ZN N/A N/A P0DTD1 41502823
    1056684 9saj:A (2.48) BS02 ZN N/A N/A P0DTD1 41502823
    1056685 9saj:A (2.48) BS03 ZN N/A N/A P0DTD1 41502823
    1056686 9saj:A (2.48) BS04 A1JMY N/A N/A P0DTD1 41502823
    1056687 9saj:B (2.48) BS01 ZN N/A N/A P0DTD1 41502823
    1056688 9saj:B (2.48) BS02 ZN N/A N/A P0DTD1 41502823
    1056689 9saj:B (2.48) BS03 ZN N/A N/A P0DTD1 41502823
    1056690 9saj:B (2.48) BS04 A1JMY N/A N/A P0DTD1 41502823
    1056691 9sak:A (2.3) BS01 A1JMZ N/A N/A P0DTD1 41502823
    1056692 9sak:A (2.3) BS02 ZN N/A N/A P0DTD1 41502823
    1056693 9sak:A (2.3) BS03 ZN N/A N/A P0DTD1 41502823
    1056694 9sak:A (2.3) BS04 ZN N/A N/A P0DTD1 41502823
    1056695 9sak:B (2.3) BS01 A1JMZ N/A N/A P0DTD1 41502823
    1056696 9sak:B (2.3) BS02 ZN N/A N/A P0DTD1 41502823
    1056697 9sak:B (2.3) BS03 ZN N/A N/A P0DTD1 41502823
    1056698 9sak:B (2.3) BS04 ZN N/A N/A P0DTD1 41502823
    1056699 9sal:A (2.29) BS01 A1JM0 N/A N/A P0DTD1 41502823
    1056700 9sal:A (2.29) BS02 ZN N/A N/A P0DTD1 41502823
    1056701 9sal:A (2.29) BS03 ZN N/A N/A P0DTD1 41502823
    1056702 9sal:A (2.29) BS04 ZN N/A N/A P0DTD1 41502823
    1056703 9sal:B (2.29) BS01 A1JM0 N/A N/A P0DTD1 41502823
    1056704 9sal:B (2.29) BS02 ZN N/A N/A P0DTD1 41502823
    1056705 9sal:B (2.29) BS03 ZN N/A N/A P0DTD1 41502823
    1056706 9sal:B (2.29) BS04 ZN N/A N/A P0DTD1 41502823
    1056707 9sam:A (2.54) BS01 ZN N/A N/A P0DTD1 41502823
    1056708 9sam:A (2.54) BS02 ZN N/A N/A P0DTD1 41502823
    1056709 9sam:A (2.54) BS03 ZN N/A N/A P0DTD1 41502823
    1056710 9sam:A (2.54) BS04 A1JM1 N/A N/A P0DTD1 41502823
    1056711 9sam:B (2.54) BS01 ZN N/A N/A P0DTD1 41502823
    1056712 9sam:B (2.54) BS02 ZN N/A N/A P0DTD1 41502823
    1056713 9sam:B (2.54) BS03 ZN N/A N/A P0DTD1 41502823
    1056714 9sam:B (2.54) BS04 A1JM1 N/A N/A P0DTD1 41502823
    1056715 9san:A (2.73) BS01 A1JM2 N/A N/A P0DTD1 41502823
    1056716 9san:A (2.73) BS02 ZN N/A N/A P0DTD1 41502823
    1056717 9san:A (2.73) BS03 ZN N/A N/A P0DTD1 41502823
    1056718 9san:A (2.73) BS04 ZN N/A N/A P0DTD1 41502823
    1056719 9san:B (2.73) BS01 A1JM2 N/A N/A P0DTD1 41502823
    1056720 9san:B (2.73) BS02 ZN N/A N/A P0DTD1 41502823
    1056721 9san:B (2.73) BS03 ZN N/A N/A P0DTD1 41502823
    1056722 9san:B (2.73) BS04 ZN N/A N/A P0DTD1 41502823
    1056723 9sao:A (2.9) BS01 rna N/A GO:0003723 ... P0DTD1 40950230
    1056724 9sao:A (2.9) BS02 rna N/A GO:0003723 ... P0DTD1 40950230
    1056725 9sao:A (2.9) BS03 ZN N/A GO:0003723 ... P0DTD1 40950230
    1056726 9sao:A (2.9) BS04 ZN N/A GO:0003723 ... P0DTD1 40950230
    1056727 9sap:A (2.9) BS01 rna N/A GO:0003723 ... P0DTD1 40950230
    1056728 9sap:A (2.9) BS02 rna N/A GO:0003723 ... P0DTD1 40950230
    1056729 9sap:A (2.9) BS03 ZN N/A GO:0003723 ... P0DTD1 40950230
    1056730 9sap:A (2.9) BS04 ZN N/A GO:0003723 ... P0DTD1 40950230
    1056731 9saq:A (3.1) BS01 rna N/A GO:0003723 ... P0DTD1 40950230
    1056732 9saq:A (3.1) BS02 rna N/A GO:0003723 ... P0DTD1 40950230
    1056733 9saq:A (3.1) BS03 ZN N/A GO:0003723 ... P0DTD1 40950230
    1056734 9saq:A (3.1) BS04 ZN N/A GO:0003723 ... P0DTD1 40950230
    1056735 9sar:A (2.8) BS01 rna N/A GO:0003723 ... P0DTD1 40950230
    1056736 9sar:A (2.8) BS02 rna N/A GO:0003723 ... P0DTD1 40950230
    1056737 9sar:A (2.8) BS03 ZN N/A GO:0003723 ... P0DTD1 40950230
    1056738 9sar:A (2.8) BS04 ZN N/A GO:0003723 ... P0DTD1 40950230
    1056739 9sat:L (2.56) BS01 ZN N/A N/A N/A N/A
    1056740 9sc5:A (2.3) BS01 NO N/A GO:0005576 ... P14639 41596427
    1056741 9sc5:A (2.3) BS02 A1JLX N/A GO:0005576 ... P14639 41596427
    1056742 9sc9:A (2.9) BS01 NDP N/A GO:0004459 ... Q60176 41274549
    1056743 9sc9:B (2.9) BS01 NDP N/A GO:0004459 ... Q60176 41274549
    1056744 9sc9:C (2.9) BS01 NDP N/A GO:0004459 ... Q60176 41274549
    1056745 9sc9:D (2.9) BS01 NDP N/A GO:0004459 ... Q60176 41274549
    1056746 9scf:A (1.65) BS01 MN N/A N/A N/A 41797450
    1056747 9scf:A (1.65) BS02 AKG N/A N/A N/A 41797450
    1056748 9scw:1 (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056749 9scw:3 (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056750 9scw:3 (3.2) BS02 peptide N/A GO:0005198 ... P08291 40922007
    1056751 9scw:3 (3.2) BS03 peptide N/A GO:0005198 ... P08291 40922007
    1056752 9scw:A (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056753 9scw:C (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056754 9scw:C (3.2) BS02 peptide N/A GO:0005198 ... P08291 40922007
    1056755 9scw:E (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056756 9scw:G (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056757 9scw:G (3.2) BS02 peptide N/A GO:0005198 ... P08291 40922007
    1056758 9scw:I (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056759 9scw:K (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056760 9scw:K (3.2) BS02 peptide N/A GO:0005198 ... P08291 40922007
    1056761 9scw:K (3.2) BS03 peptide N/A GO:0005198 ... P08291 40922007
    1056762 9scw:M (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056763 9scw:O (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056764 9scw:O (3.2) BS02 peptide N/A GO:0005198 ... P08291 40922007
    1056765 9scw:Q (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056766 9scw:S (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056767 9scw:S (3.2) BS02 peptide N/A GO:0005198 ... P08291 40922007
    1056768 9scw:S (3.2) BS03 peptide N/A GO:0005198 ... P08291 40922007
    1056769 9scw:U (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056770 9scw:W (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056771 9scw:W (3.2) BS02 peptide N/A GO:0005198 ... P08291 40922007
    1056772 9scw:Y (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056773 9scw:a (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056774 9scw:c (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056775 9scw:e (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056776 9scw:g (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056777 9scw:i (3.2) BS01 peptide N/A GO:0005198 ... P08291 40922007
    1056778 9scw:i (3.2) BS02 peptide N/A GO:0005198 ... P08291 40922007
    1056779 9scw:i (3.2) BS03 peptide N/A GO:0005198 ... P08291 40922007
    1056780 9sd3:A (2.2) BS01 NDP N/A GO:0004459 ... D5VSV9 41274549
    1056781 9sd3:B (2.2) BS01 NDP N/A GO:0004459 ... D5VSV9 41274549
    1056782 9sd3:C (2.2) BS01 NDP N/A GO:0004459 ... D5VSV9 41274549
    1056783 9sd3:D (2.2) BS01 NDP N/A GO:0004459 ... D5VSV9 41274549
    1056784 9sd3:E (2.2) BS01 NDP N/A GO:0004459 ... D5VSV9 41274549
    1056785 9sd3:F (2.2) BS01 NDP N/A GO:0004459 ... D5VSV9 41274549
    1056786 9sd3:G (2.2) BS01 NDP N/A GO:0004459 ... D5VSV9 41274549
    1056787 9sd3:H (2.2) BS01 NDP N/A GO:0004459 ... D5VSV9 41274549
    1056788 9sd5:A (1.363) BS01 BGC N/A GO:0005829 ... Q32M88 41605404
    1056789 9sd5:A (1.363) BS02 GLC N/A GO:0005829 ... Q32M88 41605404
    1056790 9sd6:A (1.7) BS01 GLC N/A GO:0005829 ... Q32M88 41605404
    1056791 9sd6:A (1.7) BS02 GLC N/A GO:0005829 ... Q32M88 41605404
    1056792 9sd6:A (1.7) BS03 BGC N/A GO:0005829 ... Q32M88 41605404
    1056793 9sd6:A (1.7) BS04 GLC N/A GO:0005829 ... Q32M88 41605404
    1056794 9sd7:A (1.39) BS01 BGC N/A GO:0005829 ... Q32M88 41605404
    1056795 9sd8:A (1.61) BS01 GLC N/A GO:0005829 ... Q32M88 41605404
    1056796 9sd8:A (1.61) BS02 BGC N/A GO:0005829 ... Q32M88 41605404
    1056797 9sd8:A (1.61) BS03 BGC N/A GO:0005829 ... Q32M88 41605404
    1056798 9sd8:B (1.61) BS01 GLC N/A GO:0005829 ... Q32M88 41605404
    1056799 9sd8:B (1.61) BS02 BGC N/A GO:0005829 ... Q32M88 41605404
    1056800 9sdf:A (1.9) BS01 rna N/A GO:0000166 ... P83453 12110594

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).