SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1056801 9sdf:A (1.9) BS02 AMP N/A GO:0000166 ... P83453 12110594
    1056802 9sdf:A (1.9) BS03 TYR N/A GO:0000166 ... P83453 12110594
    1056803 9sdi:A (2.53) BS01 A1JNJ N/A N/A Q05397 41429916
    1056804 9sdj:A (2.55) BS01 ZZ7 N/A GO:0005576 ... P14639 41596427
    1056805 9sdm:A (1.55) BS01 A1JNF N/A N/A P0DTC1 41431928
    1056806 9sdm:B (1.55) BS01 A1JNF N/A N/A P0DTC1 41431928
    1056807 9sds:A (2.49) BS01 HEM N/A GO:0004601 ... P05164 41043752
    1056808 9sds:B (2.49) BS01 HEM N/A GO:0004601 ... P05164 41043752
    1056809 9sds:C (2.49) BS01 MAN N/A GO:0004601 ... P05164 41043752
    1056810 9sds:C (2.49) BS02 HEM N/A GO:0004601 ... P05164 41043752
    1056811 9sds:C (2.49) BS03 CA N/A GO:0004601 ... P05164 41043752
    1056812 9sds:D (2.49) BS01 MAN N/A GO:0004601 ... P05164 41043752
    1056813 9sds:D (2.49) BS02 HEM N/A GO:0004601 ... P05164 41043752
    1056814 9sds:D (2.49) BS03 CA N/A GO:0004601 ... P05164 41043752
    1056815 9sdv:A (2.5) BS01 21X N/A GO:0002939 ... Q2FZ43 41367353
    1056816 9sdw:A (2.6) BS01 A1JNG N/A GO:0002939 ... Q2FZ43 41367353
    1056817 9sdx:H (2.97) BS01 SY8 N/A GO:0000151 ... O95376 41481455
    1056818 9sdx:H (2.97) BS02 ZN N/A GO:0000151 ... O95376 41481455
    1056819 9sdx:H (2.97) BS03 ZN N/A GO:0000151 ... O95376 41481455
    1056820 9sdx:H (2.97) BS04 ZN N/A GO:0000151 ... O95376 41481455
    1056821 9sdx:H (2.97) BS05 ZN N/A GO:0000151 ... O95376 41481455
    1056822 9sdx:R (2.97) BS01 ZN N/A GO:0005507 ... Q9UBF6 41481455
    1056823 9sdx:R (2.97) BS02 ZN N/A GO:0005507 ... Q9UBF6 41481455
    1056824 9sdx:R (2.97) BS03 ZN N/A GO:0005507 ... Q9UBF6 41481455
    1056825 9sdy:H (3.06) BS01 ZN N/A GO:0000151 ... O95376 41481455
    1056826 9sdy:H (3.06) BS02 ZN N/A GO:0000151 ... O95376 41481455
    1056827 9sdy:H (3.06) BS03 ZN N/A GO:0000151 ... O95376 41481455
    1056828 9sdy:H (3.06) BS04 ZN N/A GO:0000151 ... O95376 41481455
    1056829 9sdy:R (3.06) BS01 ZN N/A GO:0005507 ... Q9UBF6 41481455
    1056830 9sdy:R (3.06) BS02 ZN N/A GO:0005507 ... Q9UBF6 41481455
    1056831 9sdy:R (3.06) BS03 ZN N/A GO:0005507 ... Q9UBF6 41481455
    1056832 9se5:A (3.43) BS01 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056833 9se5:A (3.43) BS02 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056834 9se5:A (3.43) BS03 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056835 9se5:A (3.43) BS04 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056836 9se5:A (3.43) BS05 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056837 9sea:A (2.23) BS01 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056838 9sea:A (2.23) BS02 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056839 9sea:A (2.23) BS03 PSF N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056840 9sea:A (2.23) BS04 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056841 9sea:A (2.23) BS05 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056842 9sea:A (2.23) BS06 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056843 9sea:A (2.23) BS07 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056844 9sea:A (2.23) BS08 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056845 9sea:A (2.23) BS09 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056846 9sea:A (2.23) BS10 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056847 9sea:A (2.23) BS11 PSF N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056848 9seb:Z (1.9) BS01 dna N/A N/A Q9UQ84 41359073
    1056849 9seb:Z (1.9) BS02 MG N/A N/A Q9UQ84 41359073
    1056850 9seb:Z (1.9) BS03 A1JNC N/A N/A Q9UQ84 41359073
    1056851 9seg:D (2.91) BS01 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056852 9seg:D (2.91) BS02 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056853 9seg:D (2.91) BS03 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056854 9seg:D (2.91) BS04 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056855 9seg:D (2.91) BS05 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056856 9seg:D (2.91) BS06 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056857 9seg:D (2.91) BS07 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056858 9sf2:A (1.7) BS01 peptide N/A N/A A0A9W5PE21 41619737
    1056859 9sfb:A (2.7) BS01 rna N/A GO:0000166 ... P83453 12110594
    1056860 9sfb:A (2.7) BS02 YSA N/A GO:0000166 ... P83453 12110594
    1056861 9sfg:A (3.2) BS01 A1JNK N/A N/A Q96P20 41091523
    1056862 9sfg:A (3.2) BS02 ADP N/A N/A Q96P20 41091523
    1056863 9sfl:A (2.27) BS01 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056864 9sfl:A (2.27) BS02 PSF N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056865 9sfl:A (2.27) BS03 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056866 9sfl:A (2.27) BS04 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056867 9sfl:A (2.27) BS05 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056868 9sfl:A (2.27) BS06 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056869 9sfl:A (2.27) BS07 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056870 9sfl:A (2.27) BS08 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056871 9sfl:A (2.27) BS09 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056872 9sfl:A (2.27) BS10 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056873 9sfl:A (2.27) BS11 PSF N/A GO:0016020 ... A0A0R4J1K2 41091875
    1056874 9sfm:B (2.39) BS01 ZN N/A N/A Q96SW2 41565821
    1056875 9sfm:B (2.39) BS02 LVY N/A N/A Q96SW2 41565821
    1056876 9sfm:B (2.39) BS03 A1CEG N/A N/A Q96SW2 41565821
    1056877 9sfq:A (1.89) BS01 rna N/A GO:0000166 ... P83453 12110594
    1056878 9sg3:A (3.0) BS01 PHN N/A GO:0004888 ... P58154 40896114
    1056879 9sg3:B (3.0) BS01 PHN N/A GO:0004888 ... P58154 40896114
    1056880 9sg3:B (3.0) BS02 PHN N/A GO:0004888 ... P58154 40896114
    1056881 9sg3:C (3.0) BS01 PHN N/A GO:0004888 ... P58154 40896114
    1056882 9sg3:F (3.0) BS01 PHN N/A GO:0004888 ... P58154 40896114
    1056883 9sg3:G (3.0) BS01 PHN N/A GO:0004888 ... P58154 40896114
    1056884 9sg5:A (1.57) BS01 A1JNO N/A N/A O70038 41632911
    1056885 9sg6:A (1.74) BS01 A1JNV N/A N/A O70038 41632911
    1056886 9sg7:A (1.534) BS01 A1JNN N/A N/A O70038 41632911
    1056887 9sg8:A (1.811) BS01 A1JNR N/A N/A O70038 41632911
    1056888 9sg9:A (1.88) BS01 A1JNW N/A N/A O70038 41632911
    1056889 9sg9:A (1.88) BS02 SO3 N/A N/A O70038 41632911
    1056890 9sga:A (1.5) BS01 A1JNU N/A N/A O70038 41632911
    1056891 9sgb:A (1.52) BS01 A1JNQ N/A N/A O70038 41632911
    1056892 9sgc:A (1.514) BS01 A1JNP N/A N/A O70038 41632911
    1056893 9sgd:A (1.571) BS01 A1JNT N/A N/A O70038 41632911
    1056894 9sgd:A (1.571) BS02 SO3 N/A N/A O70038 41632911
    1056895 9sge:A (1.647) BS01 AZR N/A N/A O70038 41632911
    1056896 9sgh:B (2.661) BS01 ZN N/A N/A N/A 41111004
    1056897 9sgh:I (2.661) BS01 ZN N/A GO:0002225 ... Q16552 41111004
    1056898 9sgh:J (2.661) BS01 ZN N/A GO:0002225 ... Q16552 41111004
    1056899 9sgl:A (2.27) BS01 HEM N/A GO:0004096 ... P9WIE5 41432360
    1056900 9sgl:B (2.27) BS01 HEM N/A GO:0004096 ... P9WIE5 41432360
    1056901 9sgm:A (2.86) BS01 HEM N/A GO:0004096 ... P9WIE5 41432360
    1056902 9sgm:B (2.86) BS01 HEM N/A GO:0004096 ... P9WIE5 41432360
    1056903 9sgo:B (2.74) BS01 HEM N/A GO:0004096 ... P9WIE5 41432360
    1056904 9sgp:A (2.67) BS01 HEM N/A GO:0004096 ... P9WIE5 41432360
    1056905 9sgp:B (2.67) BS01 HEM N/A GO:0004096 ... P9WIE5 41432360
    1056906 9sgq:B (2.76) BS01 HEM N/A GO:0004096 ... P9WIE5 41432360
    1056907 9sgt:B (2.84) BS01 HEM N/A GO:0004096 ... P9WIE5 41432360
    1056908 9sgy:B (2.34) BS01 HEM N/A GO:0004096 ... P9WIE5 41432360
    1056909 9sh5:A (2.27) BS01 FUC N/A GO:0001501 ... P05186 N/A
    1056910 9sh5:A (2.27) BS02 FUC N/A GO:0001501 ... P05186 N/A
    1056911 9sh5:A (2.27) BS03 MG N/A GO:0001501 ... P05186 N/A
    1056912 9sh5:A (2.27) BS04 ZN N/A GO:0001501 ... P05186 N/A
    1056913 9sh5:A (2.27) BS05 CA N/A GO:0001501 ... P05186 N/A
    1056914 9sh5:A (2.27) BS06 ZN N/A GO:0001501 ... P05186 N/A
    1056915 9sh5:A (2.27) BS07 A1JNY N/A GO:0001501 ... P05186 N/A
    1056916 9sh5:B (2.27) BS01 FUC N/A GO:0001501 ... P05186 N/A
    1056917 9sh5:B (2.27) BS02 MG N/A GO:0001501 ... P05186 N/A
    1056918 9sh5:B (2.27) BS03 ZN N/A GO:0001501 ... P05186 N/A
    1056919 9sh5:B (2.27) BS04 CA N/A GO:0001501 ... P05186 N/A
    1056920 9sh5:B (2.27) BS05 ZN N/A GO:0001501 ... P05186 N/A
    1056921 9sh5:B (2.27) BS06 A1JNY N/A GO:0001501 ... P05186 N/A
    1056922 9sh8:A (2.62) BS01 NSS N/A GO:0000166 ... P54263 9582288
    1056923 9sh9:A (2.95) BS01 MG N/A GO:0000166 ... P54263 9582288
    1056924 9sh9:A (2.95) BS02 ATP N/A GO:0000166 ... P54263 9582288
    1056925 9sh9:B (2.95) BS01 MG N/A GO:0000166 ... P54263 9582288
    1056926 9sh9:B (2.95) BS02 ATP N/A GO:0000166 ... P54263 9582288
    1056927 9shc:A (2.3) BS01 A1MAL N/A GO:0000049 ... P67580 N/A
    1056928 9she:A (3.2) BS01 ABU N/A N/A A0A8U0Y4W2 41653930
    1056929 9she:A (3.2) BS02 A1JNZ N/A N/A A0A8U0Y4W2 41653930
    1056930 9she:A (3.2) BS03 ABU N/A N/A A0A8U0Y4W2 41653930
    1056931 9she:A (3.2) BS04 A1JNZ N/A N/A A0A8U0Y4W2 41653930
    1056932 9she:B (3.2) BS01 A1JNZ N/A N/A A0A8U0Y4W2 41653930
    1056933 9she:B (3.2) BS02 ABU N/A N/A A0A8U0Y4W2 41653930
    1056934 9she:B (3.2) BS03 A1JNZ N/A N/A A0A8U0Y4W2 41653930
    1056935 9she:B (3.2) BS04 ABU N/A N/A A0A8U0Y4W2 41653930
    1056936 9she:C (3.2) BS01 ABU N/A N/A A0A8U0Y4W2 41653930
    1056937 9she:C (3.2) BS02 A1JNZ N/A N/A A0A8U0Y4W2 41653930
    1056938 9she:C (3.2) BS03 A1JNZ N/A N/A A0A8U0Y4W2 41653930
    1056939 9she:C (3.2) BS04 ABU N/A N/A A0A8U0Y4W2 41653930
    1056940 9she:D (3.2) BS01 A1JNZ N/A N/A A0A8U0Y4W2 41653930
    1056941 9she:D (3.2) BS02 ABU N/A N/A A0A8U0Y4W2 41653930
    1056942 9she:D (3.2) BS03 A1JNZ N/A N/A A0A8U0Y4W2 41653930
    1056943 9she:D (3.2) BS04 ABU N/A N/A A0A8U0Y4W2 41653930
    1056944 9she:E (3.2) BS01 ABU N/A N/A A0A8U0Y4W2 41653930
    1056945 9she:E (3.2) BS02 A1JNZ N/A N/A A0A8U0Y4W2 41653930
    1056946 9she:E (3.2) BS03 A1JNZ N/A N/A A0A8U0Y4W2 41653930
    1056947 9she:E (3.2) BS04 ABU N/A N/A A0A8U0Y4W2 41653930
    1056948 9shg:A (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056949 9shg:B (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056950 9shg:C (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056951 9shg:D (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056952 9shg:E (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056953 9shg:F (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056954 9shg:G (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056955 9shg:H (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056956 9shg:I (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056957 9shg:J (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056958 9shg:K (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056959 9shg:L (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056960 9shg:M (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056961 9shg:N (1.91) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056962 9shh:A (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056963 9shh:B (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056964 9shh:C (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056965 9shh:D (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056966 9shh:E (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056967 9shh:F (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056968 9shh:G (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056969 9shh:H (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056970 9shh:I (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056971 9shh:J (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056972 9shh:K (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056973 9shh:L (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056974 9shh:M (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056975 9shh:N (2.11) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056976 9shi:A (2.19) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056977 9shi:B (2.19) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056978 9shi:C (2.19) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056979 9shi:D (2.19) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056980 9shi:E (2.19) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056981 9shi:F (2.19) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056982 9shi:G (2.19) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056983 9shj:A (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056984 9shj:B (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056985 9shj:C (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056986 9shj:D (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056987 9shj:E (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056988 9shj:F (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056989 9shj:G (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056990 9shj:H (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056991 9shj:I (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056992 9shj:J (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056993 9shj:K (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056994 9shj:L (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056995 9shj:M (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056996 9shj:N (2.18) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1056997 9shk:A (2.91) BS01 ADP N/A GO:0001530 ... P10809 N/A
    1056998 9shk:B (2.91) BS01 ADP N/A GO:0001530 ... P10809 N/A
    1056999 9shk:C (2.91) BS01 ADP N/A GO:0001530 ... P10809 N/A
    1057000 9shk:D (2.91) BS01 ADP N/A GO:0001530 ... P10809 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).