SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1057001 9shk:E (2.91) BS01 ADP N/A GO:0001530 ... P10809 N/A
    1057002 9shk:F (2.91) BS01 ADP N/A GO:0001530 ... P10809 N/A
    1057003 9shk:G (2.91) BS01 ADP N/A GO:0001530 ... P10809 N/A
    1057004 9shl:A (2.5) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1057005 9shl:B (2.5) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1057006 9shl:C (2.5) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1057007 9shl:D (2.5) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1057008 9shl:E (2.5) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1057009 9shl:F (2.5) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1057010 9shl:G (2.5) BS01 ATP N/A GO:0001530 ... P10809 N/A
    1057011 9sho:A (2.56) BS01 ABU N/A N/A A0A8U0Y4W2 41653930
    1057012 9sho:A (2.56) BS02 ABU N/A N/A A0A8U0Y4W2 41653930
    1057013 9sho:B (2.56) BS01 ABU N/A N/A A0A8U0Y4W2 41653930
    1057014 9sho:B (2.56) BS02 ABU N/A N/A A0A8U0Y4W2 41653930
    1057015 9sho:C (2.56) BS01 ABU N/A N/A A0A8U0Y4W2 41653930
    1057016 9sho:C (2.56) BS02 ABU N/A N/A A0A8U0Y4W2 41653930
    1057017 9sho:D (2.56) BS01 ABU N/A N/A A0A8U0Y4W2 41653930
    1057018 9sho:D (2.56) BS02 ABU N/A N/A A0A8U0Y4W2 41653930
    1057019 9sho:E (2.56) BS01 ABU N/A N/A A0A8U0Y4W2 41653930
    1057020 9sho:E (2.56) BS02 ABU N/A N/A A0A8U0Y4W2 41653930
    1057021 9shp:B (3.7) BS01 rna N/A GO:0003727 ... Q9JMB7 41528842
    1057022 9shp:B (3.7) BS02 MG N/A GO:0003727 ... Q9JMB7 41528842
    1057023 9shq:B (4.2) BS01 rna N/A GO:0003727 ... Q9JMB7 41528842
    1057024 9shq:B (4.2) BS02 MG N/A GO:0003727 ... Q9JMB7 41528842
    1057025 9shr:A (2.08) BS01 A1JN0 N/A GO:0005576 ... Q2G1X0 41725408
    1057026 9shx:A (2.4) BS01 dna N/A N/A A0AAX7FM29 41603736
    1057027 9shx:A (2.4) BS02 dna N/A N/A A0AAX7FM29 41603736
    1057028 9shx:A (2.4) BS03 rna N/A N/A A0AAX7FM29 41603736
    1057029 9shx:A (2.4) BS04 MG N/A N/A A0AAX7FM29 41603736
    1057030 9shx:B (2.4) BS01 dna N/A N/A A0AAX7FM22 41603736
    1057031 9shx:B (2.4) BS02 rna N/A N/A A0AAX7FM22 41603736
    1057032 9shx:C (2.4) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057033 9shx:C (2.4) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057034 9shx:D (2.4) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057035 9shx:D (2.4) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057036 9shx:E (2.4) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057037 9shx:E (2.4) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057038 9shx:F (2.4) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057039 9shx:F (2.4) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057040 9shx:G (2.4) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057041 9shx:G (2.4) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057042 9shx:H (2.4) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057043 9shx:H (2.4) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057044 9shx:I (2.4) BS01 rna N/A N/A A0AAX7FM27 41603736
    1057045 9shy:A (3.53) BS01 dna N/A GO:0000049 ... O14746 41565648
    1057046 9shy:A (3.53) BS02 rna N/A GO:0000049 ... O14746 41565648
    1057047 9shy:A (3.53) BS03 1GC N/A GO:0000049 ... O14746 41565648
    1057048 9shy:L (3.53) BS01 rna N/A GO:0005634 ... B2R5B3 41565648
    1057049 9shy:M (3.53) BS01 rna N/A GO:0005634 ... B4DR52 41565648
    1057050 9shz:A (3.2) BS01 dna N/A GO:0000049 ... O14746 41565648
    1057051 9shz:A (3.2) BS02 rna N/A GO:0000049 ... O14746 41565648
    1057052 9shz:A (3.2) BS03 A1ACD N/A GO:0000049 ... O14746 41565648
    1057053 9shz:L (3.2) BS01 rna N/A GO:0005634 ... B2R5B3 41565648
    1057054 9shz:M (3.2) BS01 rna N/A GO:0005634 ... B4DR52 41565648
    1057055 9si0:A (3.8) BS01 dna N/A GO:0000049 ... O14746 41565648
    1057056 9si0:A (3.8) BS02 rna N/A GO:0000049 ... O14746 41565648
    1057057 9si0:A (3.8) BS03 1GC N/A GO:0000049 ... O14746 41565648
    1057058 9si0:L (3.8) BS01 rna N/A GO:0005634 ... B2R5B3 41565648
    1057059 9si0:M (3.8) BS01 rna N/A GO:0005634 ... B4DR52 41565648
    1057060 9si1:A (3.1) BS01 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1057061 9si1:A (3.1) BS02 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1057062 9si1:A (3.1) BS03 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1057063 9si1:A (3.1) BS04 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1057064 9si1:A (3.1) BS05 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1057065 9si1:A (3.1) BS06 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1057066 9si1:A (3.1) BS07 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1057067 9si1:A (3.1) BS08 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1057068 9si1:A (3.1) BS09 CA N/A GO:0016020 ... A0A0R4J1K2 41091875
    1057069 9si3:A (2.83) BS01 dna N/A GO:0000786 ... P84233 41145915
    1057070 9si3:A (2.83) BS02 dna N/A GO:0000786 ... P84233 41145915
    1057071 9si3:B (2.83) BS01 dna N/A GO:0000786 ... P62799 41145915
    1057072 9si3:B (2.83) BS02 dna N/A GO:0000786 ... P62799 41145915
    1057073 9si3:C (2.83) BS01 peptide N/A GO:0000786 ... P0C0S8 41145915
    1057074 9si3:C (2.83) BS02 dna N/A GO:0000786 ... P0C0S8 41145915
    1057075 9si3:C (2.83) BS03 dna N/A GO:0000786 ... P0C0S8 41145915
    1057076 9si3:D (2.83) BS01 peptide N/A GO:0000786 ... P06899 41145915
    1057077 9si3:D (2.83) BS02 dna N/A GO:0000786 ... P06899 41145915
    1057078 9si3:D (2.83) BS03 dna N/A GO:0000786 ... P06899 41145915
    1057079 9si3:E (2.83) BS01 dna N/A GO:0000786 ... P84233 41145915
    1057080 9si3:E (2.83) BS02 dna N/A GO:0000786 ... P84233 41145915
    1057081 9si3:F (2.83) BS01 dna N/A GO:0000786 ... P62799 41145915
    1057082 9si3:F (2.83) BS02 dna N/A GO:0000786 ... P62799 41145915
    1057083 9si3:G (2.83) BS01 dna N/A GO:0000786 ... P0C0S8 41145915
    1057084 9si3:G (2.83) BS02 dna N/A GO:0000786 ... P0C0S8 41145915
    1057085 9si3:H (2.83) BS01 dna N/A GO:0000786 ... P06899 41145915
    1057086 9si3:H (2.83) BS02 dna N/A GO:0000786 ... P06899 41145915
    1057087 9si4:A (1.14) BS01 FUC N/A GO:0000122 ... P08246 41307403
    1057088 9si4:A (1.14) BS02 A1JN2 N/A GO:0000122 ... P08246 41307403
    1057089 9si5:A (2.54) BS01 HEM N/A GO:0005737 ... Q9ZAU3 41639599
    1057090 9si5:A (2.54) BS02 A1JN3 N/A GO:0005737 ... Q9ZAU3 41639599
    1057091 9si5:D (2.54) BS01 HEM N/A GO:0005737 ... Q9ZAU3 41639599
    1057092 9si5:D (2.54) BS02 A1JN3 N/A GO:0005737 ... Q9ZAU3 41639599
    1057093 9si9:A (2.86) BS01 dna N/A GO:0000786 ... P84233 41145915
    1057094 9si9:A (2.86) BS02 dna N/A GO:0000786 ... P84233 41145915
    1057095 9si9:B (2.86) BS01 dna N/A GO:0000786 ... P62799 41145915
    1057096 9si9:B (2.86) BS02 dna N/A GO:0000786 ... P62799 41145915
    1057097 9si9:C (2.86) BS01 dna N/A GO:0000786 ... P0C0S8 41145915
    1057098 9si9:C (2.86) BS02 dna N/A GO:0000786 ... P0C0S8 41145915
    1057099 9si9:C (2.86) BS03 peptide N/A GO:0000786 ... P0C0S8 41145915
    1057100 9si9:D (2.86) BS01 dna N/A GO:0000786 ... P06899 41145915
    1057101 9si9:D (2.86) BS02 dna N/A GO:0000786 ... P06899 41145915
    1057102 9si9:D (2.86) BS03 peptide N/A GO:0000786 ... P06899 41145915
    1057103 9si9:E (2.86) BS01 dna N/A GO:0000786 ... S4RAZ3 41145915
    1057104 9si9:E (2.86) BS02 dna N/A GO:0000786 ... S4RAZ3 41145915
    1057105 9si9:F (2.86) BS01 dna N/A GO:0000786 ... P62799 41145915
    1057106 9si9:F (2.86) BS02 dna N/A GO:0000786 ... P62799 41145915
    1057107 9si9:G (2.86) BS01 dna N/A GO:0000786 ... P0C0S8 41145915
    1057108 9si9:G (2.86) BS02 dna N/A GO:0000786 ... P0C0S8 41145915
    1057109 9si9:H (2.86) BS01 dna N/A GO:0000786 ... P06899 41145915
    1057110 9si9:H (2.86) BS02 dna N/A GO:0000786 ... P06899 41145915
    1057111 9sia:C (1.83) BS01 TRP N/A N/A N/A 41497624
    1057112 9sic:A (1.5) BS01 ZN N/A N/A N/A 41497624
    1057113 9sic:C (1.5) BS01 ZN N/A N/A N/A 41497624
    1057114 9sid:A (1.69) BS01 ZN N/A N/A N/A 41497624
    1057115 9siq:A (2.96) BS01 PT5 N/A N/A A0A8U0Y4W2 41653930
    1057116 9siq:A (2.96) BS02 PT5 N/A N/A A0A8U0Y4W2 41653930
    1057117 9siq:B (2.96) BS01 PT5 N/A N/A A0A8U0Y4W2 41653930
    1057118 9siq:B (2.96) BS02 PT5 N/A N/A A0A8U0Y4W2 41653930
    1057119 9siq:C (2.96) BS01 PT5 N/A N/A A0A8U0Y4W2 41653930
    1057120 9siq:C (2.96) BS02 A1JN7 N/A N/A A0A8U0Y4W2 41653930
    1057121 9siq:C (2.96) BS03 PT5 N/A N/A A0A8U0Y4W2 41653930
    1057122 9siq:D (2.96) BS01 PT5 N/A N/A A0A8U0Y4W2 41653930
    1057123 9siq:D (2.96) BS02 PT5 N/A N/A A0A8U0Y4W2 41653930
    1057124 9siq:E (2.96) BS01 PT5 N/A N/A A0A8U0Y4W2 41653930
    1057125 9siq:E (2.96) BS02 A1JN7 N/A N/A A0A8U0Y4W2 41653930
    1057126 9siq:E (2.96) BS03 PT5 N/A N/A A0A8U0Y4W2 41653930
    1057127 9sit:A (1.75) BS01 dna N/A N/A A0AAX7FM29 41603736
    1057128 9sit:A (1.75) BS02 dna N/A N/A A0AAX7FM29 41603736
    1057129 9sit:A (1.75) BS03 rna N/A N/A A0AAX7FM29 41603736
    1057130 9sit:B (1.75) BS01 dna N/A N/A A0AAX7FM22 41603736
    1057131 9sit:B (1.75) BS02 rna N/A N/A A0AAX7FM22 41603736
    1057132 9sit:C (1.75) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057133 9sit:C (1.75) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057134 9sit:D (1.75) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057135 9sit:D (1.75) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057136 9sit:E (1.75) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057137 9sit:E (1.75) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057138 9sit:F (1.75) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057139 9sit:F (1.75) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057140 9sit:G (1.75) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057141 9sit:G (1.75) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057142 9sit:H (1.75) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057143 9sit:H (1.75) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057144 9sit:I (1.75) BS01 rna N/A N/A A0AAX7FM27 41603736
    1057145 9siu:A (2.64) BS01 dna N/A N/A A0AAX7FM29 41603736
    1057146 9siu:A (2.64) BS02 dna N/A N/A A0AAX7FM29 41603736
    1057147 9siu:A (2.64) BS03 rna N/A N/A A0AAX7FM29 41603736
    1057148 9siu:B (2.64) BS01 dna N/A N/A A0AAX7FM22 41603736
    1057149 9siu:B (2.64) BS02 rna N/A N/A A0AAX7FM22 41603736
    1057150 9siu:C (2.64) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057151 9siu:C (2.64) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057152 9siu:D (2.64) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057153 9siu:D (2.64) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057154 9siu:E (2.64) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057155 9siu:E (2.64) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057156 9siu:F (2.64) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057157 9siu:F (2.64) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057158 9siu:G (2.64) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057159 9siu:G (2.64) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057160 9siu:H (2.64) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057161 9siu:H (2.64) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057162 9siu:I (2.64) BS01 rna N/A N/A A0AAX7FM27 41603736
    1057163 9sj5:A (2.85) BS01 dna N/A GO:0000786 ... P84233 41145915
    1057164 9sj5:A (2.85) BS02 dna N/A GO:0000786 ... P84233 41145915
    1057165 9sj5:B (2.85) BS01 dna N/A GO:0000786 ... P62799 41145915
    1057166 9sj5:B (2.85) BS02 dna N/A GO:0000786 ... P62799 41145915
    1057167 9sj5:C (2.85) BS01 dna N/A GO:0000786 ... P0C0S8 41145915
    1057168 9sj5:C (2.85) BS02 dna N/A GO:0000786 ... P0C0S8 41145915
    1057169 9sj5:C (2.85) BS03 peptide N/A GO:0000786 ... P0C0S8 41145915
    1057170 9sj5:D (2.85) BS01 dna N/A GO:0000786 ... P06899 41145915
    1057171 9sj5:D (2.85) BS02 dna N/A GO:0000786 ... P06899 41145915
    1057172 9sj5:D (2.85) BS03 peptide N/A GO:0000786 ... P06899 41145915
    1057173 9sj5:E (2.85) BS01 dna N/A GO:0000786 ... P84233 41145915
    1057174 9sj5:E (2.85) BS02 dna N/A GO:0000786 ... P84233 41145915
    1057175 9sj5:F (2.85) BS01 dna N/A GO:0000786 ... P62799 41145915
    1057176 9sj5:F (2.85) BS02 dna N/A GO:0000786 ... P62799 41145915
    1057177 9sj5:G (2.85) BS01 dna N/A GO:0000786 ... P0C0S8 41145915
    1057178 9sj5:G (2.85) BS02 dna N/A GO:0000786 ... P0C0S8 41145915
    1057179 9sj5:H (2.85) BS01 dna N/A GO:0000786 ... P06899 41145915
    1057180 9sj5:H (2.85) BS02 dna N/A GO:0000786 ... P06899 41145915
    1057181 9sjc:A (1.92) BS01 dna N/A N/A A0AAX7FM29 41603736
    1057182 9sjc:A (1.92) BS02 dna N/A N/A A0AAX7FM29 41603736
    1057183 9sjc:A (1.92) BS03 rna N/A N/A A0AAX7FM29 41603736
    1057184 9sjc:B (1.92) BS01 dna N/A N/A A0AAX7FM22 41603736
    1057185 9sjc:B (1.92) BS02 rna N/A N/A A0AAX7FM22 41603736
    1057186 9sjc:C (1.92) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057187 9sjc:C (1.92) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057188 9sjc:D (1.92) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057189 9sjc:D (1.92) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057190 9sjc:E (1.92) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057191 9sjc:E (1.92) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057192 9sjc:F (1.92) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057193 9sjc:F (1.92) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057194 9sjc:G (1.92) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057195 9sjc:H (1.92) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057196 9sjc:I (1.92) BS01 rna N/A N/A A0AAX7FM27 41603736
    1057197 9sjd:A (3.05) BS01 dna N/A N/A A0AAX7FM29 41603736
    1057198 9sjd:A (3.05) BS02 dna N/A N/A A0AAX7FM29 41603736
    1057199 9sjd:A (3.05) BS03 rna N/A N/A A0AAX7FM29 41603736
    1057200 9sjd:B (3.05) BS01 dna N/A N/A A0AAX7FM22 41603736

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).