SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1057201 9sjd:B (3.05) BS02 rna N/A N/A A0AAX7FM22 41603736
    1057202 9sjd:C (3.05) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057203 9sjd:C (3.05) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057204 9sjd:D (3.05) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057205 9sjd:D (3.05) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057206 9sjd:E (3.05) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057207 9sjd:E (3.05) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057208 9sjd:F (3.05) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057209 9sjd:F (3.05) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057210 9sjd:G (3.05) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057211 9sjd:H (3.05) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057212 9sjd:I (3.05) BS01 rna N/A N/A A0AAX7FM27 41603736
    1057213 9sjl:A (3.93) BS01 dna N/A N/A A0AAX7FM29 41603736
    1057214 9sjl:A (3.93) BS02 dna N/A N/A A0AAX7FM29 41603736
    1057215 9sjl:A (3.93) BS03 rna N/A N/A A0AAX7FM29 41603736
    1057216 9sjl:B (3.93) BS01 dna N/A N/A A0AAX7FM22 41603736
    1057217 9sjl:B (3.93) BS02 rna N/A N/A A0AAX7FM22 41603736
    1057218 9sjl:C (3.93) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057219 9sjl:C (3.93) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057220 9sjl:D (3.93) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057221 9sjl:D (3.93) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057222 9sjl:E (3.93) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057223 9sjl:E (3.93) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057224 9sjl:F (3.93) BS01 dna N/A N/A A0AAX7FM28 41603736
    1057225 9sjl:F (3.93) BS02 rna N/A N/A A0AAX7FM28 41603736
    1057226 9sjl:G (3.93) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057227 9sjl:H (3.93) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057228 9sjl:I (3.93) BS01 rna N/A N/A A0AAX7FM27 41603736
    1057229 9sjm:A (3.13) BS01 rna N/A N/A A0AAX7FM29 41603736
    1057230 9sjm:B (3.13) BS01 rna N/A N/A A0AAX7FM22 41603736
    1057231 9sjm:C (3.13) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057232 9sjm:D (3.13) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057233 9sjm:E (3.13) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057234 9sjm:F (3.13) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057235 9sjm:G (3.13) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057236 9sjm:H (3.13) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057237 9sjm:I (3.13) BS01 rna N/A N/A A0AAX7FM27 41603736
    1057238 9sjn:A (3.03) BS01 rna N/A N/A A0AAX7FM29 41603736
    1057239 9sjn:B (3.03) BS01 rna N/A N/A A0AAX7FM22 41603736
    1057240 9sjn:C (3.03) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057241 9sjn:D (3.03) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057242 9sjn:E (3.03) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057243 9sjn:F (3.03) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057244 9sjn:G (3.03) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057245 9sjn:H (3.03) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057246 9sjn:I (3.03) BS01 rna N/A N/A A0AAX7FM27 41603736
    1057247 9sjo:A (3.07) BS01 rna N/A N/A A0AAX7FM29 41603736
    1057248 9sjo:B (3.07) BS01 rna N/A N/A A0AAX7FM22 41603736
    1057249 9sjo:C (3.07) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057250 9sjo:D (3.07) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057251 9sjo:E (3.07) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057252 9sjo:F (3.07) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057253 9sjo:G (3.07) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057254 9sjo:H (3.07) BS01 rna N/A N/A A0AAX7FM28 41603736
    1057255 9sjo:I (3.07) BS01 rna N/A N/A A0AAX7FM27 41603736
    1057256 9sjr:A (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057257 9sjr:B (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057258 9sjr:C (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057259 9sjr:D (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057260 9sjr:E (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057261 9sjr:F (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057262 9sjr:G (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057263 9sjr:H (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057264 9sjr:I (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057265 9sjr:J (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057266 9sjr:K (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057267 9sjr:L (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057268 9sjr:M (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057269 9sjr:N (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057270 9sjr:O (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057271 9sjr:P (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057272 9sjr:Q (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057273 9sjr:R (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057274 9sjr:S (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057275 9sjr:T (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057276 9sjr:V (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057277 9sjr:W (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057278 9sjr:X (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057279 9sjr:Y (1.99) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057280 9sjs:A (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057281 9sjs:B (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057282 9sjs:C (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057283 9sjs:D (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057284 9sjs:E (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057285 9sjs:F (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057286 9sjs:G (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057287 9sjs:H (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057288 9sjs:I (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057289 9sjs:J (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057290 9sjs:K (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057291 9sjs:L (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057292 9sjs:M (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057293 9sjs:N (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057294 9sjs:O (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057295 9sjs:P (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057296 9sjs:Q (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057297 9sjs:R (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057298 9sjs:S (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057299 9sjs:T (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057300 9sjs:V (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057301 9sjs:W (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057302 9sjs:X (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057303 9sjs:Y (2.06) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057304 9sjt:A (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057305 9sjt:B (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057306 9sjt:C (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057307 9sjt:D (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057308 9sjt:E (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057309 9sjt:F (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057310 9sjt:G (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057311 9sjt:H (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057312 9sjt:I (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057313 9sjt:J (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057314 9sjt:K (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057315 9sjt:L (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057316 9sjt:M (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057317 9sjt:N (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057318 9sjt:O (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057319 9sjt:P (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057320 9sjt:Q (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057321 9sjt:R (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057322 9sjt:S (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057323 9sjt:T (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057324 9sjt:V (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057325 9sjt:W (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057326 9sjt:X (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057327 9sjt:Y (1.96) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057328 9sju:A (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057329 9sju:B (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057330 9sju:C (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057331 9sju:D (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057332 9sju:E (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057333 9sju:F (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057334 9sju:G (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057335 9sju:H (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057336 9sju:I (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057337 9sju:J (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057338 9sju:K (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057339 9sju:L (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057340 9sju:M (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057341 9sju:N (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057342 9sju:O (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057343 9sju:P (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057344 9sju:Q (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057345 9sju:R (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057346 9sju:S (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057347 9sju:T (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057348 9sju:V (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057349 9sju:W (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057350 9sju:X (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057351 9sju:Y (2.08) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057352 9sjv:A (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057353 9sjv:B (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057354 9sjv:C (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057355 9sjv:D (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057356 9sjv:E (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057357 9sjv:F (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057358 9sjv:G (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057359 9sjv:H (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057360 9sjv:I (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057361 9sjv:J (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057362 9sjv:K (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057363 9sjv:L (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057364 9sjv:M (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057365 9sjv:N (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057366 9sjv:O (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057367 9sjv:P (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057368 9sjv:Q (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057369 9sjv:R (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057370 9sjv:S (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057371 9sjv:T (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057372 9sjv:V (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057373 9sjv:W (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057374 9sjv:X (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057375 9sjv:Y (1.89) BS01 MG N/A GO:0004322 ... P02794 41785322
    1057376 9skh:E (2.6) BS01 ZN N/A N/A N/A 41612625
    1057377 9skh:F (2.6) BS01 ZN N/A N/A N/A 41612625
    1057378 9skh:G (2.6) BS01 ZN N/A N/A N/A 41612625
    1057379 9skh:H (2.6) BS01 ZN N/A N/A N/A 41612625
    1057380 9skm:E (1.87) BS01 ZN N/A N/A N/A 41612625
    1057381 9skm:F (1.87) BS01 ZN N/A N/A N/A 41612625
    1057382 9skm:G (1.87) BS01 ZN N/A N/A N/A 41612625
    1057383 9skm:H (1.87) BS01 ZN N/A N/A N/A 41612625
    1057384 9sko:A (1.49) BS01 peptide N/A N/A A5I8L1 N/A
    1057385 9skp:A (1.89) BS01 peptide N/A N/A A5I8L1 N/A
    1057386 9skq:A (3.4) BS01 ANP N/A GO:0000082 ... P06493 41100585
    1057387 9skq:J (3.4) BS01 ANP N/A GO:0000439 ... P50613 41100585
    1057388 9skq:J (3.4) BS02 MG N/A GO:0000439 ... P50613 41100585
    1057389 9skq:J (3.4) BS03 ANP N/A GO:0000439 ... P50613 41100585
    1057390 9sl0:A (1.6) BS01 peptide N/A N/A A5I8L1 N/A
    1057391 9sl8:A (2.52) BS01 FUC N/A GO:0001540 ... P06276 41242410
    1057392 9sl8:A (2.52) BS02 A1JOH N/A GO:0001540 ... P06276 41242410
    1057393 9sl9:A (2.69) BS01 FUC N/A GO:0001540 ... P06276 41242410
    1057394 9sl9:A (2.69) BS02 A1JOI N/A GO:0001540 ... P06276 41242410
    1057395 9slj:A (3.8) BS01 dna N/A GO:0000786 ... P84233 41145915
    1057396 9slj:A (3.8) BS02 dna N/A GO:0000786 ... P84233 41145915
    1057397 9slj:B (3.8) BS01 dna N/A GO:0000786 ... P62799 41145915
    1057398 9slj:B (3.8) BS02 dna N/A GO:0000786 ... P62799 41145915
    1057399 9slj:C (3.8) BS01 dna N/A GO:0000786 ... P0C0S8 41145915
    1057400 9slj:C (3.8) BS02 dna N/A GO:0000786 ... P0C0S8 41145915

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).