SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1057601 9spf:LW (2.4) BS02 rna N/A GO:0002181 ... P83731 41535458
    1057602 9spf:LX (2.4) BS01 rna N/A GO:0002181 ... P62750 41535458
    1057603 9spf:LX (2.4) BS02 rna N/A GO:0002181 ... P62750 41535458
    1057604 9spf:LY (2.4) BS01 rna N/A GO:0002181 ... P61254 41535458
    1057605 9spf:LY (2.4) BS02 rna N/A GO:0002181 ... P61254 41535458
    1057606 9spf:LZ (2.4) BS01 rna N/A GO:0002181 ... P61353 41535458
    1057607 9spf:La (2.4) BS01 rna N/A GO:0002181 ... P46776 41535458
    1057608 9spf:Lb (2.4) BS01 rna N/A GO:0002181 ... P47914 41535458
    1057609 9spf:Lc (2.4) BS01 rna N/A GO:0002181 ... P62888 41535458
    1057610 9spf:Ld (2.4) BS01 rna N/A GO:0002181 ... P62899 41535458
    1057611 9spf:Le (2.4) BS01 rna N/A GO:0002181 ... P62910 41535458
    1057612 9spf:Lf (2.4) BS01 rna N/A GO:0002181 ... P18077 41535458
    1057613 9spf:Lg (2.4) BS01 rna N/A GO:0002181 ... P49207 41535458
    1057614 9spf:Lg (2.4) BS02 ZN N/A GO:0002181 ... P49207 41535458
    1057615 9spf:Lh (2.4) BS01 rna N/A GO:0000463 ... P42766 41535458
    1057616 9spf:Lh (2.4) BS02 rna N/A GO:0000463 ... P42766 41535458
    1057617 9spf:Li (2.4) BS01 rna N/A GO:0002181 ... Q9Y3U8 41535458
    1057618 9spf:Lj (2.4) BS01 rna N/A GO:0000448 ... P61927 41535458
    1057619 9spf:Lj (2.4) BS02 rna N/A GO:0000448 ... P61927 41535458
    1057620 9spf:Lj (2.4) BS03 ZN N/A GO:0000448 ... P61927 41535458
    1057621 9spf:Lk (2.4) BS01 rna N/A GO:0002181 ... P63173 41535458
    1057622 9spf:Ll (2.4) BS01 rna N/A GO:0002181 ... P62891 41535458
    1057623 9spf:Ll (2.4) BS02 rna N/A GO:0002181 ... P62891 41535458
    1057624 9spf:Lm (2.4) BS01 rna N/A GO:0002181 ... P62987 41535458
    1057625 9spf:Lm (2.4) BS02 ZN N/A GO:0002181 ... P62987 41535458
    1057626 9spf:Lo (2.4) BS01 rna N/A GO:0002181 ... P83881 41535458
    1057627 9spf:Lo (2.4) BS02 rna N/A GO:0002181 ... P83881 41535458
    1057628 9spf:Lo (2.4) BS03 rna N/A GO:0002181 ... P83881 41535458
    1057629 9spf:Lo (2.4) BS04 ZN N/A GO:0002181 ... P83881 41535458
    1057630 9spf:Lp (2.4) BS01 rna N/A GO:0002181 ... P61513 41535458
    1057631 9spf:Lp (2.4) BS02 rna N/A GO:0002181 ... P61513 41535458
    1057632 9spf:Lp (2.4) BS03 ZN N/A GO:0002181 ... P61513 41535458
    1057633 9spf:Lr (2.4) BS01 rna N/A GO:0002181 ... P46779 41535458
    1057634 9spf:SA (2.4) BS01 rna N/A GO:0000028 ... P08865 41535458
    1057635 9spf:SB (2.4) BS01 rna N/A GO:0002181 ... P61247 41535458
    1057636 9spf:SB (2.4) BS02 rna N/A GO:0002181 ... P61247 41535458
    1057637 9spf:SC (2.4) BS01 rna N/A GO:0002181 ... P15880 41535458
    1057638 9spf:SD (2.4) BS01 rna N/A GO:0001228 ... P23396 41535458
    1057639 9spf:SE (2.4) BS01 rna N/A GO:0002181 ... P62701 41535458
    1057640 9spf:SF (2.4) BS01 rna N/A GO:0002181 ... P46782 41535458
    1057641 9spf:SF (2.4) BS02 rna N/A GO:0002181 ... P46782 41535458
    1057642 9spf:SG (2.4) BS01 rna N/A GO:0002181 ... P62753 41535458
    1057643 9spf:SH (2.4) BS01 rna N/A GO:0002181 ... P62081 41535458
    1057644 9spf:SI (2.4) BS01 rna N/A GO:0002181 ... P62241 41535458
    1057645 9spf:SI (2.4) BS02 rna N/A GO:0002181 ... P62241 41535458
    1057646 9spf:SJ (2.4) BS01 rna N/A GO:0002181 ... P46781 41535458
    1057647 9spf:SK (2.4) BS01 rna N/A GO:0002181 ... P46783 41535458
    1057648 9spf:SL (2.4) BS01 rna N/A GO:0002181 ... P62280 41535458
    1057649 9spf:SM (2.4) BS01 rna N/A GO:0002181 ... P25398 41535458
    1057650 9spf:SN (2.4) BS01 rna N/A GO:0000462 ... P62277 41535458
    1057651 9spf:SN (2.4) BS02 rna N/A GO:0000462 ... P62277 41535458
    1057652 9spf:SO (2.4) BS01 rna N/A GO:0000028 ... P62263 41535458
    1057653 9spf:SP (2.4) BS01 rna N/A GO:0000056 ... P62841 41535458
    1057654 9spf:SP (2.4) BS02 rna N/A GO:0000056 ... P62841 41535458
    1057655 9spf:SQ (2.4) BS01 rna N/A GO:0000462 ... P62249 41535458
    1057656 9spf:SR (2.4) BS01 rna N/A GO:0002181 ... P08708 41535458
    1057657 9spf:SS (2.4) BS01 rna N/A GO:0002181 ... P62269 41535458
    1057658 9spf:ST (2.4) BS01 rna N/A GO:0000028 ... P39019 41535458
    1057659 9spf:SU (2.4) BS01 rna N/A GO:0002181 ... P60866 41535458
    1057660 9spf:SW (2.4) BS01 rna N/A GO:0002181 ... P62244 41535458
    1057661 9spf:SX (2.4) BS01 rna N/A GO:0005791 ... A0A4W2DI10 41535458
    1057662 9spf:SY (2.4) BS01 rna N/A GO:0002181 ... P62847 41535458
    1057663 9spf:SZ (2.4) BS01 rna N/A GO:0002181 ... P62851 41535458
    1057664 9spf:SZ (2.4) BS02 rna N/A GO:0002181 ... P62851 41535458
    1057665 9spf:Sa (2.4) BS01 rna N/A GO:0002181 ... P62854 41535458
    1057666 9spf:Sa (2.4) BS02 ZN N/A GO:0002181 ... P62854 41535458
    1057667 9spf:Sb (2.4) BS01 rna N/A GO:0002181 ... P42677 41535458
    1057668 9spf:Sc (2.4) BS01 rna N/A GO:0000028 ... P62857 41535458
    1057669 9spf:Sd (2.4) BS01 rna N/A GO:0002181 ... P62273 41535458
    1057670 9spf:Sd (2.4) BS02 ZN N/A GO:0002181 ... P62273 41535458
    1057671 9spf:Se (2.4) BS01 rna N/A GO:0002181 ... P62861 41535458
    1057672 9spf:Sf (2.4) BS01 rna N/A GO:0002181 ... P62979 41535458
    1057673 9spf:Sg (2.4) BS01 rna N/A GO:0001891 ... P63244 41535458
    1057674 9spi:LA (2.4) BS01 rna N/A GO:0002181 ... P62917 41535458
    1057675 9spi:LB (2.4) BS01 rna N/A GO:0002181 ... P39023 41535458
    1057676 9spi:LC (2.4) BS01 rna N/A GO:0002181 ... P36578 41535458
    1057677 9spi:LC (2.4) BS02 rna N/A GO:0002181 ... P36578 41535458
    1057678 9spi:LD (2.4) BS01 rna N/A GO:0000027 ... P46777 41535458
    1057679 9spi:LD (2.4) BS02 rna N/A GO:0000027 ... P46777 41535458
    1057680 9spi:LE (2.4) BS01 rna N/A GO:0002181 ... Q02878 41535458
    1057681 9spi:LF (2.4) BS01 rna N/A GO:0000463 ... P18124 41535458
    1057682 9spi:LF (2.4) BS02 rna N/A GO:0000463 ... P18124 41535458
    1057683 9spi:LG (2.4) BS01 rna N/A GO:0000470 ... P62424 41535458
    1057684 9spi:LG (2.4) BS02 rna N/A GO:0000470 ... P62424 41535458
    1057685 9spi:LH (2.4) BS01 rna N/A GO:0002181 ... P32969 41535458
    1057686 9spi:LI (2.4) BS01 rna N/A GO:0000122 ... P27635 41535458
    1057687 9spi:LI (2.4) BS02 rna N/A GO:0000122 ... P27635 41535458
    1057688 9spi:LJ (2.4) BS01 rna N/A GO:0000027 ... P62913 41535458
    1057689 9spi:LJ (2.4) BS02 rna N/A GO:0000027 ... P62913 41535458
    1057690 9spi:LJ (2.4) BS03 rna N/A GO:0000027 ... P62913 41535458
    1057691 9spi:LL (2.4) BS01 rna N/A GO:0002181 ... P26373 41535458
    1057692 9spi:LL (2.4) BS02 rna N/A GO:0002181 ... P26373 41535458
    1057693 9spi:LM (2.4) BS01 rna N/A GO:0002181 ... P50914 41535458
    1057694 9spi:LN (2.4) BS01 rna N/A GO:0002181 ... P61313 41535458
    1057695 9spi:LN (2.4) BS02 rna N/A GO:0002181 ... P61313 41535458
    1057696 9spi:LO (2.4) BS01 rna N/A GO:0002181 ... P40429 41535458
    1057697 9spi:LP (2.4) BS01 rna N/A GO:0002181 ... P18621 41535458
    1057698 9spi:LP (2.4) BS02 rna N/A GO:0002181 ... P18621 41535458
    1057699 9spi:LQ (2.4) BS01 rna N/A GO:0002181 ... Q07020 41535458
    1057700 9spi:LR (2.4) BS01 rna N/A GO:0002181 ... P84098 41535458
    1057701 9spi:LR (2.4) BS02 rna N/A GO:0002181 ... P84098 41535458
    1057702 9spi:LS (2.4) BS01 rna N/A GO:0002181 ... Q02543 41535458
    1057703 9spi:LS (2.4) BS02 rna N/A GO:0002181 ... Q02543 41535458
    1057704 9spi:LT (2.4) BS01 rna N/A GO:0001650 ... P46778 41535458
    1057705 9spi:LT (2.4) BS02 rna N/A GO:0001650 ... P46778 41535458
    1057706 9spi:LU (2.4) BS01 rna N/A GO:0002181 ... P35268 41535458
    1057707 9spi:LV (2.4) BS01 rna N/A GO:0000122 ... P62829 41535458
    1057708 9spi:LV (2.4) BS02 rna N/A GO:0000122 ... P62829 41535458
    1057709 9spi:LW (2.4) BS01 rna N/A GO:0002181 ... P83731 41535458
    1057710 9spi:LX (2.4) BS01 rna N/A GO:0002181 ... P62750 41535458
    1057711 9spi:LX (2.4) BS02 rna N/A GO:0002181 ... P62750 41535458
    1057712 9spi:LY (2.4) BS01 rna N/A GO:0002181 ... P61254 41535458
    1057713 9spi:LY (2.4) BS02 rna N/A GO:0002181 ... P61254 41535458
    1057714 9spi:LZ (2.4) BS01 rna N/A GO:0002181 ... P61353 41535458
    1057715 9spi:La (2.4) BS01 rna N/A GO:0002181 ... P46776 41535458
    1057716 9spi:Lb (2.4) BS01 rna N/A GO:0002181 ... P47914 41535458
    1057717 9spi:Lc (2.4) BS01 rna N/A GO:0002181 ... P62888 41535458
    1057718 9spi:Ld (2.4) BS01 rna N/A GO:0002181 ... P62899 41535458
    1057719 9spi:Le (2.4) BS01 rna N/A GO:0002181 ... P62910 41535458
    1057720 9spi:Lf (2.4) BS01 rna N/A GO:0002181 ... P18077 41535458
    1057721 9spi:Lg (2.4) BS01 rna N/A GO:0002181 ... P49207 41535458
    1057722 9spi:Lg (2.4) BS02 ZN N/A GO:0002181 ... P49207 41535458
    1057723 9spi:Lh (2.4) BS01 rna N/A GO:0000463 ... P42766 41535458
    1057724 9spi:Lh (2.4) BS02 rna N/A GO:0000463 ... P42766 41535458
    1057725 9spi:Li (2.4) BS01 rna N/A GO:0002181 ... Q9Y3U8 41535458
    1057726 9spi:Lj (2.4) BS01 rna N/A GO:0000448 ... P61927 41535458
    1057727 9spi:Lj (2.4) BS02 rna N/A GO:0000448 ... P61927 41535458
    1057728 9spi:Lj (2.4) BS03 ZN N/A GO:0000448 ... P61927 41535458
    1057729 9spi:Lk (2.4) BS01 rna N/A GO:0002181 ... P63173 41535458
    1057730 9spi:Ll (2.4) BS01 rna N/A GO:0002181 ... P62891 41535458
    1057731 9spi:Ll (2.4) BS02 rna N/A GO:0002181 ... P62891 41535458
    1057732 9spi:Lm (2.4) BS01 rna N/A GO:0002181 ... P62987 41535458
    1057733 9spi:Lm (2.4) BS02 ZN N/A GO:0002181 ... P62987 41535458
    1057734 9spi:Lo (2.4) BS01 rna N/A GO:0002181 ... P83881 41535458
    1057735 9spi:Lo (2.4) BS02 rna N/A GO:0002181 ... P83881 41535458
    1057736 9spi:Lo (2.4) BS03 rna N/A GO:0002181 ... P83881 41535458
    1057737 9spi:Lo (2.4) BS04 ZN N/A GO:0002181 ... P83881 41535458
    1057738 9spi:Lp (2.4) BS01 rna N/A GO:0002181 ... P61513 41535458
    1057739 9spi:Lp (2.4) BS02 ZN N/A GO:0002181 ... P61513 41535458
    1057740 9spi:Lr (2.4) BS01 rna N/A GO:0002181 ... P46779 41535458
    1057741 9spi:SA (2.4) BS01 rna N/A GO:0000028 ... P08865 41535458
    1057742 9spi:SB (2.4) BS01 rna N/A GO:0002181 ... P61247 41535458
    1057743 9spi:SC (2.4) BS01 rna N/A GO:0002181 ... P15880 41535458
    1057744 9spi:SD (2.4) BS01 rna N/A GO:0001228 ... P23396 41535458
    1057745 9spi:SE (2.4) BS01 rna N/A GO:0002181 ... P62701 41535458
    1057746 9spi:SF (2.4) BS01 rna N/A GO:0002181 ... P46782 41535458
    1057747 9spi:SF (2.4) BS02 rna N/A GO:0002181 ... P46782 41535458
    1057748 9spi:SG (2.4) BS01 rna N/A GO:0002181 ... P62753 41535458
    1057749 9spi:SH (2.4) BS01 rna N/A GO:0002181 ... P62081 41535458
    1057750 9spi:SI (2.4) BS01 rna N/A GO:0002181 ... P62241 41535458
    1057751 9spi:SI (2.4) BS02 rna N/A GO:0002181 ... P62241 41535458
    1057752 9spi:SJ (2.4) BS01 rna N/A GO:0002181 ... P46781 41535458
    1057753 9spi:SK (2.4) BS01 rna N/A GO:0002181 ... P46783 41535458
    1057754 9spi:SL (2.4) BS01 rna N/A GO:0002181 ... P62280 41535458
    1057755 9spi:SN (2.4) BS01 rna N/A GO:0000462 ... P62277 41535458
    1057756 9spi:SN (2.4) BS02 rna N/A GO:0000462 ... P62277 41535458
    1057757 9spi:SO (2.4) BS01 rna N/A GO:0000028 ... P62263 41535458
    1057758 9spi:SP (2.4) BS01 rna N/A GO:0000056 ... P62841 41535458
    1057759 9spi:SP (2.4) BS02 rna N/A GO:0000056 ... P62841 41535458
    1057760 9spi:SQ (2.4) BS01 rna N/A GO:0000462 ... P62249 41535458
    1057761 9spi:SR (2.4) BS01 rna N/A GO:0002181 ... P08708 41535458
    1057762 9spi:SS (2.4) BS01 rna N/A GO:0002181 ... P62269 41535458
    1057763 9spi:ST (2.4) BS01 rna N/A GO:0000028 ... P39019 41535458
    1057764 9spi:SU (2.4) BS01 rna N/A GO:0002181 ... P60866 41535458
    1057765 9spi:SW (2.4) BS01 rna N/A GO:0002181 ... P62244 41535458
    1057766 9spi:SX (2.4) BS01 rna N/A GO:0005791 ... A0A4W2DI10 41535458
    1057767 9spi:SX (2.4) BS02 rna N/A GO:0005791 ... A0A4W2DI10 41535458
    1057768 9spi:SY (2.4) BS01 rna N/A GO:0002181 ... P62847 41535458
    1057769 9spi:SZ (2.4) BS01 rna N/A GO:0002181 ... P62851 41535458
    1057770 9spi:SZ (2.4) BS02 rna N/A GO:0002181 ... P62851 41535458
    1057771 9spi:Sa (2.4) BS01 rna N/A GO:0002181 ... P62854 41535458
    1057772 9spi:Sa (2.4) BS02 ZN N/A GO:0002181 ... P62854 41535458
    1057773 9spi:Sb (2.4) BS01 rna N/A GO:0002181 ... P42677 41535458
    1057774 9spi:Sc (2.4) BS01 rna N/A GO:0000028 ... P62857 41535458
    1057775 9spi:Sd (2.4) BS01 rna N/A GO:0002181 ... P62273 41535458
    1057776 9spi:Sd (2.4) BS02 ZN N/A GO:0002181 ... P62273 41535458
    1057777 9spi:Se (2.4) BS01 rna N/A GO:0002181 ... P62861 41535458
    1057778 9spi:Se (2.4) BS02 rna N/A GO:0002181 ... P62861 41535458
    1057779 9spi:Sf (2.4) BS01 rna N/A GO:0002181 ... P62979 41535458
    1057780 9spi:Sg (2.4) BS01 rna N/A GO:0001891 ... P63244 41535458
    1057781 9sq9:A (2.05) BS01 ZN N/A GO:0005524 ... A0A8B6J667 N/A
    1057782 9sq9:B (2.05) BS01 ZN N/A GO:0005524 ... A0A8B6J667 N/A
    1057783 9sqi:A (1.48) BS01 A1JPQ N/A GO:0002225 ... Q16552 41355177
    1057784 9sqi:B (1.48) BS01 A1JPQ N/A GO:0002225 ... Q16552 41355177
    1057785 9sqi:C (1.48) BS01 A1JPQ N/A GO:0002225 ... Q16552 41355177
    1057786 9sqi:D (1.48) BS01 A1JPQ N/A GO:0002225 ... Q16552 41355177
    1057787 9sqj:AAA (1.981) BS01 ZN N/A GO:0005524 ... A0A8B6J667 N/A
    1057788 9sqj:AAA (1.981) BS02 ANP N/A GO:0005524 ... A0A8B6J667 N/A
    1057789 9sqj:BBB (1.981) BS01 ZN N/A GO:0005524 ... A0A8B6J667 N/A
    1057790 9sqj:BBB (1.981) BS02 ANP N/A GO:0005524 ... A0A8B6J667 N/A
    1057791 9sqt:A (1.49) BS01 GLA N/A GO:0005737 ... Q05097 N/A
    1057792 9sqt:A (1.49) BS02 CA N/A GO:0005737 ... Q05097 N/A
    1057793 9sqt:B (1.49) BS01 GLA N/A GO:0005737 ... Q05097 N/A
    1057794 9sqt:B (1.49) BS02 CA N/A GO:0005737 ... Q05097 N/A
    1057795 9sqt:C (1.49) BS01 GLA N/A GO:0005737 ... Q05097 N/A
    1057796 9sqt:C (1.49) BS02 CA N/A GO:0005737 ... Q05097 N/A
    1057797 9sqt:D (1.49) BS01 GLA N/A GO:0005737 ... Q05097 N/A
    1057798 9sqt:D (1.49) BS02 CA N/A GO:0005737 ... Q05097 N/A
    1057799 9sqt:E (1.49) BS01 GLA N/A GO:0005737 ... Q05097 N/A
    1057800 9sqt:E (1.49) BS02 CA N/A GO:0005737 ... Q05097 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).