SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    105601 2rhx:A (2.1) BS01 MLY ? GO:0005634 ... Q9Y468 18042461
    105602 2rhy:A (1.9) BS01 MLZ ? GO:0005634 ... Q9Y468 18042461
    105603 2ri1:A (2.03) BS01 GLP 3.5.99.6 GO:0004342 ... Q8DV70 18436239
    105604 2ri1:B (2.03) BS01 GLP 3.5.99.6 GO:0004342 ... Q8DV70 18436239
    105605 2ri4:A (2.7) BS01 HEM ? GO:0004601 ... P0CH25 N/A
    105606 2ri4:B (2.7) BS01 HEM ? GO:0004601 ... P02077 N/A
    105607 2ri4:C (2.7) BS01 HEM ? GO:0004601 ... P0CH25 N/A
    105608 2ri4:D (2.7) BS01 HEM ? GO:0004601 ... P02077 N/A
    105609 2ri4:I (2.7) BS01 HEM ? GO:0004601 ... P0CH25 N/A
    105610 2ri4:J (2.7) BS01 HEM ? GO:0004601 ... P02077 N/A
    105611 2ri4:K (2.7) BS01 HEM ? GO:0004601 ... P0CH25 N/A
    105612 2ri4:L (2.7) BS01 HEM ? GO:0004601 ... P02077 N/A
    105613 2ri7:A (1.45) BS01 peptide ? GO:0006357 ... Q12830 18042461
    105614 2ri7:A (1.45) BS02 ZN ? GO:0006357 ... Q12830 18042461
    105615 2ri7:A (1.45) BS03 ZN ? GO:0006357 ... Q12830 18042461
    105616 2ri9:A (1.95) BS01 MMA 3.2.1.113 GO:0004571 ... P31723 18323617
    105617 2ri9:A (1.95) BS02 LDY 3.2.1.113 GO:0004571 ... P31723 18323617
    105618 2ri9:B (1.95) BS01 MMA 3.2.1.113 GO:0004571 ... P31723 18323617
    105619 2ri9:B (1.95) BS02 LDY 3.2.1.113 GO:0004571 ... P31723 18323617
    105620 2ria:A (1.8) BS01 CA ? N/A P35247 18092821
    105621 2ria:A (1.8) BS02 CA ? N/A P35247 18092821
    105622 2ria:A (1.8) BS03 CA ? N/A P35247 18092821
    105623 2ria:A (1.8) BS04 289 ? N/A P35247 18092821 MOAD: ic50=2.7mM
    105624 2ria:B (1.8) BS01 CA ? N/A P35247 18092821
    105625 2ria:B (1.8) BS02 CA ? N/A P35247 18092821
    105626 2ria:B (1.8) BS03 CA ? N/A P35247 18092821
    105627 2ria:B (1.8) BS04 289 ? N/A P35247 18092821 MOAD: ic50=2.7mM
    105628 2ria:C (1.8) BS01 CA ? N/A P35247 18092821
    105629 2ria:C (1.8) BS02 CA ? N/A P35247 18092821
    105630 2ria:C (1.8) BS03 CA ? N/A P35247 18092821
    105631 2ria:C (1.8) BS04 289 ? N/A P35247 18092821 MOAD: ic50=2.7mM
    105632 2rib:A (1.8) BS01 CA ? N/A P35247 18092821
    105633 2rib:A (1.8) BS02 CA ? N/A P35247 18092821
    105634 2rib:A (1.8) BS03 CA ? N/A P35247 18092821
    105635 2rib:A (1.8) BS04 GMH ? N/A P35247 18092821
    105636 2rib:B (1.8) BS01 CA ? N/A P35247 18092821
    105637 2rib:B (1.8) BS02 CA ? N/A P35247 18092821
    105638 2rib:B (1.8) BS03 CA ? N/A P35247 18092821
    105639 2rib:B (1.8) BS04 GMH ? N/A P35247 18092821
    105640 2rib:C (1.8) BS01 CA ? N/A P35247 18092821
    105641 2rib:C (1.8) BS02 CA ? N/A P35247 18092821
    105642 2rib:C (1.8) BS03 CA ? N/A P35247 18092821
    105643 2rib:C (1.8) BS04 GMH ? N/A P35247 18092821
    105644 2ric:A (1.8) BS01 CA ? N/A P35247 18092821
    105645 2ric:A (1.8) BS02 CA ? N/A P35247 18092821
    105646 2ric:A (1.8) BS03 CA ? N/A P35247 18092821
    105647 2ric:A (1.8) BS04 GMH ? N/A P35247 18092821
    105648 2ric:B (1.8) BS01 GMH ? N/A P35247 18092821
    105649 2ric:B (1.8) BS02 CA ? N/A P35247 18092821
    105650 2ric:B (1.8) BS03 CA ? N/A P35247 18092821
    105651 2ric:B (1.8) BS04 CA ? N/A P35247 18092821
    105652 2ric:C (1.8) BS01 GMH ? N/A P35247 18092821
    105653 2ric:C (1.8) BS02 CA ? N/A P35247 18092821
    105654 2ric:C (1.8) BS03 CA ? N/A P35247 18092821
    105655 2ric:C (1.8) BS04 CA ? N/A P35247 18092821
    105656 2rid:A (1.8) BS01 CA ? N/A P35247 18092821
    105657 2rid:A (1.8) BS02 CA ? N/A P35247 18092821
    105658 2rid:A (1.8) BS03 CA ? N/A P35247 18092821
    105659 2rid:A (1.8) BS04 291 ? N/A P35247 18092821 MOAD: ic50=1.7mM
    105660 2rid:B (1.8) BS01 CA ? N/A P35247 18092821
    105661 2rid:B (1.8) BS02 CA ? N/A P35247 18092821
    105662 2rid:B (1.8) BS03 CA ? N/A P35247 18092821
    105663 2rid:B (1.8) BS04 291 ? N/A P35247 18092821 MOAD: ic50=1.7mM
    105664 2rid:C (1.8) BS01 CA ? N/A P35247 18092821
    105665 2rid:C (1.8) BS02 CA ? N/A P35247 18092821
    105666 2rid:C (1.8) BS03 CA ? N/A P35247 18092821
    105667 2rid:C (1.8) BS04 291 ? N/A P35247 18092821 MOAD: ic50=1.7mM
    105668 2rie:A (1.6) BS01 CA ? N/A P35247 18092821
    105669 2rie:A (1.6) BS02 CA ? N/A P35247 18092821
    105670 2rie:A (1.6) BS03 CA ? N/A P35247 18092821
    105671 2rie:A (1.6) BS04 293 ? N/A P35247 18092821
    105672 2rie:B (1.6) BS01 CA ? N/A P35247 18092821
    105673 2rie:B (1.6) BS02 CA ? N/A P35247 18092821
    105674 2rie:B (1.6) BS03 CA ? N/A P35247 18092821
    105675 2rie:B (1.6) BS04 293 ? N/A P35247 18092821
    105676 2rie:C (1.6) BS01 CA ? N/A P35247 18092821
    105677 2rie:C (1.6) BS02 CA ? N/A P35247 18092821
    105678 2rie:C (1.6) BS03 CA ? N/A P35247 18092821
    105679 2rie:C (1.6) BS04 293 ? N/A P35247 18092821
    105680 2rif:A (2.35) BS01 AMP ? N/A Q8ZVX8 18513746
    105681 2rif:A (2.35) BS02 AMP ? N/A Q8ZVX8 18513746
    105682 2rif:B (2.35) BS01 AMP ? N/A Q8ZVX8 18513746
    105683 2rif:B (2.35) BS02 AMP ? N/A Q8ZVX8 18513746
    105684 2rif:C (2.35) BS01 AMP ? N/A Q8ZVX8 18513746
    105685 2rif:C (2.35) BS02 AMP ? N/A Q8ZVX8 18513746
    105686 2rif:D (2.35) BS01 AMP ? N/A Q8ZVX8 18513746
    105687 2rif:D (2.35) BS02 AMP ? N/A Q8ZVX8 18513746
    105688 2rin:A (1.8) BS01 ACH ? GO:0015871 ... Q92N37 18779321 MOAD: Kd=100uM
    105689 2rin:B (1.8) BS01 ACH ? GO:0015871 ... Q92N37 18779321 MOAD: Kd=100uM
    105690 2rio:A (2.4) BS01 MG 2.7.11.1
    3.1.26.-
    GO:0004521 ... P32361 18191223
    105691 2rio:A (2.4) BS02 ADP 2.7.11.1
    3.1.26.-
    GO:0004521 ... P32361 18191223
    105692 2rio:B (2.4) BS01 MG 2.7.11.1
    3.1.26.-
    GO:0004521 ... P32361 18191223
    105693 2rio:B (2.4) BS02 ADP 2.7.11.1
    3.1.26.-
    GO:0004521 ... P32361 18191223
    105694 2rip:A (2.9) BS01 34Q 3.4.14.5 GO:0001618 ... P27487 17977724 BindingDB: IC50=65nM
    105695 2riq:A (1.7) BS01 ZN 2.4.2.-
    2.4.2.30
    GO:0008270 ... P09874 18055453
    105696 2rir:A (2.79) BS01 NAP 1.3.1.- N/A Q04809 N/A
    105697 2rir:B (2.79) BS01 NAP 1.3.1.- N/A Q04809 N/A
    105698 2rir:C (2.79) BS01 NAP 1.3.1.- N/A Q04809 N/A
    105699 2rir:D (2.79) BS01 NAP 1.3.1.- N/A Q04809 N/A
    105700 2rir:E (2.79) BS01 NAP 1.3.1.- N/A Q04809 N/A
    105701 2rir:F (2.79) BS01 NAP 1.3.1.- N/A Q04809 N/A
    105702 2rir:G (2.79) BS01 NAP 1.3.1.- N/A Q04809 N/A
    105703 2rir:H (2.79) BS01 NAP 1.3.1.- N/A Q04809 N/A
    105704 2riu:A (1.7) BS01 5RP 4.1.99.12 GO:0005758 ... Q5A3V6 18219123
    105705 2riw:A (2.04) BS01 T44 ? GO:0004867 ... P05543 21325280
    105706 2riw:B (2.04) BS01 T44 ? N/A P05543 21325280
    105707 2rix:A (1.75) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105708 2rix:A (1.75) BS02 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105709 2riy:A (1.55) BS01 BHE 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105710 2rj0:A (1.52) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105711 2rj0:A (1.52) BS02 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105712 2rj1:A (1.55) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105713 2rj1:A (1.55) BS02 BHE 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105714 2rj1:A (1.55) BS03 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105715 2rj3:A (2.51) BS01 URA 2.4.2.3 GO:0003824 ... P0A1F6 N/A
    105716 2rj3:B (2.51) BS01 URA 2.4.2.3 GO:0003824 ... P0A1F6 N/A
    105717 2rj3:D (2.51) BS01 URA 2.4.2.3 GO:0003824 ... P0A1F6 N/A
    105718 2rj3:E (2.51) BS01 URA 2.4.2.3 GO:0003824 ... P0A1F6 N/A
    105719 2rj3:F (2.51) BS01 URA 2.4.2.3 GO:0003824 ... P0A1F6 N/A
    105720 2rj4:A (1.47) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105721 2rj4:A (1.47) BS02 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105722 2rj4:A (1.47) BS03 AD7 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105723 2rj5:A (1.45) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105724 2rj5:A (1.45) BS02 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105725 2rj6:A (1.41) BS01 BHE 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105726 2rj7:A (1.7) BS01 GDU 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105727 2rj7:A (1.7) BS02 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105728 2rj7:A (1.7) BS03 DA8 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105729 2rj8:A (1.69) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105730 2rj8:A (1.69) BS02 BHE 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105731 2rj8:A (1.69) BS03 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105732 2rj9:A (1.69) BS01 MN 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105733 2rj9:A (1.69) BS02 AD7 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105734 2rj9:A (1.69) BS03 UDP 2.4.1.37
    2.4.1.40
    GO:0005975 ... P16442 18192272
    105735 2rjb:A (2.6) BS01 ZN 1.13.11.93 GO:0016491 ... A0A0H2UZX2 N/A
    105736 2rjb:B (2.6) BS01 ZN 1.13.11.93 GO:0016491 ... A0A0H2UZX2 N/A
    105737 2rjb:C (2.6) BS01 ZN 1.13.11.93 GO:0016491 ... A0A0H2UZX2 N/A
    105738 2rjb:D (2.6) BS01 ZN 1.13.11.93 GO:0016491 ... A0A0H2UZX2 N/A
    105739 2rje:A (1.86) BS01 peptide ? GO:0005634 ... Q9Y468 18026117
    105740 2rje:A (1.86) BS02 peptide ? GO:0005634 ... Q9Y468 18026117
    105741 2rje:B (1.86) BS01 peptide ? GO:0005634 ... Q9Y468 18026117
    105742 2rje:B (1.86) BS02 peptide ? GO:0005634 ... Q9Y468 18026117
    105743 2rjf:A (2.05) BS01 peptide ? GO:0005634 ... Q9Y468 18026117
    105744 2rjf:A (2.05) BS02 peptide ? GO:0005634 ... Q9Y468 18026117
    105745 2rjf:C (2.05) BS01 peptide ? GO:0005634 ... Q9Y468 18026117
    105746 2rjf:C (2.05) BS02 peptide ? GO:0005634 ... Q9Y468 18026117
    105747 2rjg:A (2.4) BS01 PLP 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105748 2rjg:B (2.4) BS01 PLP 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105749 2rjg:C (2.4) BS01 PLP 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105750 2rjg:D (2.4) BS01 PLP 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105751 2rjh:A (2.4) BS01 DCS 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105752 2rjh:A (2.4) BS02 DCS 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105753 2rjh:B (2.4) BS01 DCS 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105754 2rjh:B (2.4) BS02 DCS 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105755 2rjh:C (2.4) BS01 DCS 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105756 2rjh:C (2.4) BS02 DCS 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105757 2rjh:D (2.4) BS01 DCS 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105758 2rjh:D (2.4) BS02 DCS 5.1.1.1 GO:0003824 ... P0A6B4 18434499
    105759 2rji:A (1.8) BS01 CA ? N/A Q25842 18036613
    105760 2rjo:A (2.05) BS01 GAL ? N/A B2TEP5 N/A
    105761 2rjp:A (2.8) BS01 ZN 3.4.24.82 GO:0004222 ... O75173 18042673
    105762 2rjp:A (2.8) BS02 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105763 2rjp:A (2.8) BS03 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105764 2rjp:A (2.8) BS04 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105765 2rjp:A (2.8) BS05 886 3.4.24.82 GO:0004222 ... O75173 18042673 BindingDB: IC50=100nM
    105766 2rjp:B (2.8) BS01 ZN 3.4.24.82 GO:0004222 ... O75173 18042673
    105767 2rjp:B (2.8) BS02 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105768 2rjp:B (2.8) BS03 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105769 2rjp:B (2.8) BS04 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105770 2rjp:B (2.8) BS05 886 3.4.24.82 GO:0004222 ... O75173 18042673 BindingDB: IC50=100nM
    105771 2rjp:C (2.8) BS01 ZN 3.4.24.82 GO:0004222 ... O75173 18042673
    105772 2rjp:C (2.8) BS02 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105773 2rjp:C (2.8) BS03 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105774 2rjp:C (2.8) BS04 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105775 2rjp:C (2.8) BS05 886 3.4.24.82 GO:0004222 ... O75173 18042673 BindingDB: IC50=100nM
    105776 2rjp:D (2.8) BS01 ZN 3.4.24.82 GO:0004222 ... O75173 18042673
    105777 2rjp:D (2.8) BS02 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105778 2rjp:D (2.8) BS03 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105779 2rjp:D (2.8) BS04 CA 3.4.24.82 GO:0004222 ... O75173 18042673
    105780 2rjp:D (2.8) BS05 886 3.4.24.82 GO:0004222 ... O75173 18042673 BindingDB: IC50=100nM
    105781 2rjq:A (2.6) BS01 ZN 3.4.24.- GO:0004222 ... Q9UNA0 18042673
    105782 2rjq:A (2.6) BS02 CA 3.4.24.- GO:0004222 ... Q9UNA0 18042673
    105783 2rjq:A (2.6) BS03 CA 3.4.24.- GO:0004222 ... Q9UNA0 18042673
    105784 2rjq:A (2.6) BS04 BAT 3.4.24.- GO:0004222 ... Q9UNA0 18042673
    105785 2rjr:A (2.1) BS01 295 4.3.1.23
    5.4.3.6
    GO:0003824 ... Q8GMG0 18078753
    105786 2rjs:A (2.4) BS01 296 4.3.1.23
    5.4.3.6
    GO:0003824 ... Q8GMG0 18078753
    105787 2rjs:A (2.4) BS02 296 4.3.1.23
    5.4.3.6
    GO:0003824 ... Q8GMG0 18078753
    105788 2rjs:B (2.4) BS01 296 4.3.1.23
    5.4.3.6
    GO:0003824 ... Q8GMG0 18078753
    105789 2rk1:A (1.26) BS01 NAP 1.5.1.3 GO:0004146 ... P00383 18052202
    105790 2rk2:A (1.9) BS01 NAP 1.5.1.3 GO:0004146 ... P00383 18052202
    105791 2rk7:A (1.9) BS01 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707
    105792 2rk7:A (1.9) BS02 OXL 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707 MOAD: Ki=89uM
    105793 2rk7:B (1.9) BS01 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707
    105794 2rk7:B (1.9) BS02 OXL 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707 MOAD: Ki=89uM
    105795 2rk8:A (2.0) BS01 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707
    105796 2rk8:A (2.0) BS02 PPF 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707 MOAD: Ki=230uM
    105797 2rk8:B (2.0) BS01 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707
    105798 2rk8:B (2.0) BS02 PPF 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707 MOAD: Ki=230uM
    105799 2rka:A (1.95) BS01 PGA 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707 MOAD: Ki=1mM
    105800 2rka:A (1.95) BS02 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P07379 18197707

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).