SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1057801 9sqt:F (1.49) BS01 GLA N/A GO:0005737 ... Q05097 N/A
    1057802 9sqt:F (1.49) BS02 CA N/A GO:0005737 ... Q05097 N/A
    1057803 9sqt:G (1.49) BS01 GLA N/A GO:0005737 ... Q05097 N/A
    1057804 9sqt:G (1.49) BS02 CA N/A GO:0005737 ... Q05097 N/A
    1057805 9sqt:H (1.49) BS01 GLA N/A GO:0005737 ... Q05097 N/A
    1057806 9sqt:H (1.49) BS02 CA N/A GO:0005737 ... Q05097 N/A
    1057807 9sqx:A (1.413) BS01 A1JPS N/A GO:0002225 ... Q16552 41355177
    1057808 9sqx:B (1.413) BS01 A1JPS N/A GO:0002225 ... Q16552 41355177
    1057809 9sqx:C (1.413) BS01 A1JPS N/A GO:0002225 ... Q16552 41355177
    1057810 9sqx:D (1.413) BS01 A1JPS N/A GO:0002225 ... Q16552 41355177
    1057811 9sr2:A (2.65) BS01 BGC N/A N/A G2SWT3 N/A
    1057812 9sr2:A (2.65) BS02 BGC N/A N/A G2SWT3 N/A
    1057813 9sr2:B (2.65) BS01 BGC N/A N/A G2SWT3 N/A
    1057814 9sr2:B (2.65) BS02 BGC N/A N/A G2SWT3 N/A
    1057815 9sr2:B (2.65) BS03 BGC N/A N/A G2SWT3 N/A
    1057816 9sr8:A (2.565) BS01 A1JPU N/A GO:0002225 ... Q16552 41355177
    1057817 9sr8:B (2.565) BS01 A1JPU N/A GO:0002225 ... Q16552 41355177
    1057818 9srg:A (1.32) BS01 FMN N/A N/A A0A0N9XAG5 41363046
    1057819 9sri:A (3.3) BS01 dna N/A N/A Q07864 41790928
    1057820 9sri:A (3.3) BS02 dna N/A N/A Q07864 41790928
    1057821 9sri:A (3.3) BS03 SF4 N/A N/A Q07864 41790928
    1057822 9srk:A (1.8) BS01 CA N/A N/A Q9BWP8 41134631
    1057823 9srk:A (1.8) BS02 CA N/A N/A Q9BWP8 41134631
    1057824 9srk:A (1.8) BS03 CA N/A N/A Q9BWP8 41134631
    1057825 9srk:A (1.8) BS04 FUC N/A N/A Q9BWP8 41134631
    1057826 9srk:A (1.8) BS05 FUL N/A N/A Q9BWP8 41134631
    1057827 9srk:A (1.8) BS06 FUL N/A N/A Q9BWP8 41134631
    1057828 9srk:A (1.8) BS07 FUC N/A N/A Q9BWP8 41134631
    1057829 9srk:B (1.8) BS01 CA N/A N/A Q9BWP8 41134631
    1057830 9srk:B (1.8) BS02 CA N/A N/A Q9BWP8 41134631
    1057831 9srk:B (1.8) BS03 CA N/A N/A Q9BWP8 41134631
    1057832 9srk:B (1.8) BS04 FUC N/A N/A Q9BWP8 41134631
    1057833 9srk:B (1.8) BS05 FUL N/A N/A Q9BWP8 41134631
    1057834 9srk:B (1.8) BS06 FUC N/A N/A Q9BWP8 41134631
    1057835 9srk:B (1.8) BS07 FUL N/A N/A Q9BWP8 41134631
    1057836 9sro:0 (2.6) BS01 rna N/A N/A N/A 41282059
    1057837 9sro:1 (2.6) BS01 rna N/A N/A N/A 41282059
    1057838 9sro:2 (2.6) BS01 rna N/A N/A N/A 41282059
    1057839 9sro:3 (2.6) BS01 rna N/A N/A N/A 41282059
    1057840 9sro:3 (2.6) BS02 ZN N/A N/A N/A 41282059
    1057841 9sro:4 (2.6) BS01 rna N/A N/A N/A 41282059
    1057842 9sro:B (2.6) BS01 rna N/A N/A N/A 41282059
    1057843 9sro:C (2.6) BS01 rna N/A N/A N/A 41282059
    1057844 9sro:D (2.6) BS01 rna N/A N/A N/A 41282059
    1057845 9sro:E (2.6) BS01 rna N/A N/A N/A 41282059
    1057846 9sro:F (2.6) BS01 rna N/A N/A N/A 41282059
    1057847 9sro:G (2.6) BS01 rna N/A N/A N/A 41282059
    1057848 9sro:H (2.6) BS01 rna N/A N/A N/A 41282059
    1057849 9sro:I (2.6) BS01 rna N/A N/A N/A 41282059
    1057850 9sro:I (2.6) BS02 rna N/A N/A N/A 41282059
    1057851 9sro:J (2.6) BS01 rna N/A N/A N/A 41282059
    1057852 9sro:K (2.6) BS01 rna N/A N/A N/A 41282059
    1057853 9sro:L (2.6) BS01 rna N/A N/A N/A 41282059
    1057854 9sro:M (2.6) BS01 rna N/A N/A N/A 41282059
    1057855 9sro:N (2.6) BS01 rna N/A N/A N/A 41282059
    1057856 9sro:O (2.6) BS01 rna N/A N/A N/A 41282059
    1057857 9sro:O (2.6) BS02 rna N/A N/A N/A 41282059
    1057858 9sro:P (2.6) BS01 rna N/A N/A N/A 41282059
    1057859 9sro:Q (2.6) BS01 rna N/A N/A N/A 41282059
    1057860 9sro:R (2.6) BS01 rna N/A N/A N/A 41282059
    1057861 9sro:S (2.6) BS01 rna N/A N/A N/A 41282059
    1057862 9sro:T (2.6) BS01 rna N/A N/A N/A 41282059
    1057863 9sro:U (2.6) BS01 rna N/A N/A N/A 41282059
    1057864 9sro:c (2.6) BS01 rna N/A N/A N/A 41282059
    1057865 9sro:c (2.6) BS02 rna N/A N/A N/A 41282059
    1057866 9sro:d (2.6) BS01 rna N/A N/A N/A 41282059
    1057867 9sro:e (2.6) BS01 rna N/A N/A N/A 41282059
    1057868 9sro:f (2.6) BS01 rna N/A N/A N/A 41282059
    1057869 9sro:f (2.6) BS02 rna N/A N/A N/A 41282059
    1057870 9sro:g (2.6) BS01 rna N/A N/A N/A 41282059
    1057871 9sro:i (2.6) BS01 rna N/A N/A N/A 41282059
    1057872 9sro:j (2.6) BS01 rna N/A N/A N/A 41282059
    1057873 9sro:j (2.6) BS02 rna N/A N/A N/A 41282059
    1057874 9sro:k (2.6) BS01 rna N/A N/A N/A 41282059
    1057875 9sro:l (2.6) BS01 rna N/A N/A N/A 41282059
    1057876 9sro:l (2.6) BS02 rna N/A N/A N/A 41282059
    1057877 9sro:l (2.6) BS03 rna N/A N/A N/A 41282059
    1057878 9sro:m (2.6) BS01 rna N/A N/A N/A 41282059
    1057879 9sro:n (2.6) BS01 rna N/A N/A N/A 41282059
    1057880 9sro:n (2.6) BS02 rna N/A N/A N/A 41282059
    1057881 9sro:o (2.6) BS01 rna N/A N/A N/A 41282059
    1057882 9sro:o (2.6) BS02 rna N/A N/A N/A 41282059
    1057883 9sro:p (2.6) BS01 rna N/A N/A N/A 41282059
    1057884 9sro:q (2.6) BS01 rna N/A N/A N/A 41282059
    1057885 9sro:r (2.6) BS01 rna N/A N/A N/A 41282059
    1057886 9sro:s (2.6) BS01 rna N/A N/A N/A 41282059
    1057887 9sro:u (2.6) BS01 rna N/A N/A N/A 41282059
    1057888 9sro:v (2.6) BS01 rna N/A N/A N/A 41282059
    1057889 9sro:v (2.6) BS02 rna N/A N/A N/A 41282059
    1057890 9sro:w (2.6) BS01 rna N/A N/A N/A 41282059
    1057891 9sro:w (2.6) BS02 peptide N/A N/A N/A 41282059
    1057892 9sro:x (2.6) BS01 rna N/A N/A N/A 41282059
    1057893 9sro:y (2.6) BS01 rna N/A N/A N/A 41282059
    1057894 9sro:y (2.6) BS02 rna N/A N/A N/A 41282059
    1057895 9sro:z (2.6) BS01 rna N/A N/A N/A 41282059
    1057896 9ss0:AA (3.0) BS01 rna N/A GO:0000028 ... P0A7V0 41542601
    1057897 9ss0:AC (3.0) BS01 rna N/A GO:0000028 ... P0A7V8 41542601
    1057898 9ss0:AD (3.0) BS01 rna N/A GO:0000028 ... P0A7W1 41542601
    1057899 9ss0:AE (3.0) BS01 rna N/A GO:0002181 ... P02358 41542601
    1057900 9ss0:AF (3.0) BS01 rna N/A GO:0000028 ... P02359 41542601
    1057901 9ss0:AG (3.0) BS01 rna N/A GO:0000028 ... P0A7W7 41542601
    1057902 9ss0:AH (3.0) BS01 rna N/A GO:0002181 ... P0A7X3 41542601
    1057903 9ss0:AJ (3.0) BS01 rna N/A GO:0002181 ... P0A7R9 41542601
    1057904 9ss0:AK (3.0) BS01 rna N/A GO:0000049 ... P0A7S3 41542601
    1057905 9ss0:AN (3.0) BS01 rna N/A GO:0000028 ... P0ADZ4 41542601
    1057906 9ss0:AO (3.0) BS01 rna N/A GO:0000028 ... P0A7T3 41542601
    1057907 9ss0:AP (3.0) BS01 rna N/A GO:0000028 ... P0AG63 41542601
    1057908 9ss0:AQ (3.0) BS01 rna N/A GO:0002181 ... P0A7T7 41542601
    1057909 9ss0:AS (3.0) BS01 rna N/A GO:0000028 ... P0A7U7 41542601
    1057910 9ss0:AT (3.0) BS01 rna N/A GO:0000028 ... P68679 41542601
    1057911 9ss0:F1 (3.0) BS01 rna N/A GO:0003743 ... P69222 41542601
    1057912 9ss0:F3 (3.0) BS01 rna N/A GO:0003743 ... P0A707 41542601
    1057913 9ss1:AA (2.9) BS01 rna N/A GO:0000028 ... P0A7V0 41542601
    1057914 9ss1:AC (2.9) BS01 rna N/A GO:0000028 ... P0A7V8 41542601
    1057915 9ss1:AD (2.9) BS01 rna N/A GO:0000028 ... P0A7W1 41542601
    1057916 9ss1:AE (2.9) BS01 rna N/A GO:0002181 ... P02358 41542601
    1057917 9ss1:AF (2.9) BS01 rna N/A GO:0000028 ... P02359 41542601
    1057918 9ss1:AG (2.9) BS01 rna N/A GO:0000028 ... P0A7W7 41542601
    1057919 9ss1:AH (2.9) BS01 rna N/A GO:0002181 ... P0A7X3 41542601
    1057920 9ss1:AJ (2.9) BS01 rna N/A GO:0002181 ... P0A7R9 41542601
    1057921 9ss1:AK (2.9) BS01 rna N/A GO:0000049 ... P0A7S3 41542601
    1057922 9ss1:AL (2.9) BS01 rna N/A GO:0000049 ... P0A7S9 41542601
    1057923 9ss1:AN (2.9) BS01 rna N/A GO:0000028 ... P0ADZ4 41542601
    1057924 9ss1:AO (2.9) BS01 rna N/A GO:0000028 ... P0A7T3 41542601
    1057925 9ss1:AP (2.9) BS01 rna N/A GO:0000028 ... P0AG63 41542601
    1057926 9ss1:AQ (2.9) BS01 rna N/A GO:0002181 ... P0A7T7 41542601
    1057927 9ss1:AR (2.9) BS01 rna N/A GO:0002181 ... P0A7U3 41542601
    1057928 9ss1:AS (2.9) BS01 rna N/A GO:0000028 ... P0A7U7 41542601
    1057929 9ss1:AT (2.9) BS01 rna N/A GO:0000028 ... P68679 41542601
    1057930 9ss1:F1 (2.9) BS01 rna N/A GO:0003743 ... P69222 41542601
    1057931 9ss1:F3 (2.9) BS01 rna N/A GO:0003743 ... P0A707 41542601
    1057932 9ss2:AA (2.9) BS01 rna N/A GO:0000028 ... P0A7V0 41542601
    1057933 9ss2:AB (2.9) BS01 rna N/A GO:0000028 ... P0A7V3 41542601
    1057934 9ss2:AC (2.9) BS01 rna N/A GO:0000028 ... P0A7V8 41542601
    1057935 9ss2:AD (2.9) BS01 rna N/A GO:0000028 ... P0A7W1 41542601
    1057936 9ss2:AE (2.9) BS01 rna N/A GO:0002181 ... P02358 41542601
    1057937 9ss2:AF (2.9) BS01 rna N/A GO:0000028 ... P02359 41542601
    1057938 9ss2:AG (2.9) BS01 rna N/A GO:0000028 ... P0A7W7 41542601
    1057939 9ss2:AH (2.9) BS01 rna N/A GO:0002181 ... P0A7X3 41542601
    1057940 9ss2:AI (2.9) BS01 rna N/A GO:0000049 ... P0A7R5 41542601
    1057941 9ss2:AJ (2.9) BS01 rna N/A GO:0002181 ... P0A7R9 41542601
    1057942 9ss2:AK (2.9) BS01 rna N/A GO:0000049 ... P0A7S3 41542601
    1057943 9ss2:AL (2.9) BS01 rna N/A GO:0000049 ... P0A7S9 41542601
    1057944 9ss2:AM (2.9) BS01 rna N/A GO:0000028 ... P0AG59 41542601
    1057945 9ss2:AN (2.9) BS01 rna N/A GO:0000028 ... P0ADZ4 41542601
    1057946 9ss2:AO (2.9) BS01 rna N/A GO:0000028 ... P0A7T3 41542601
    1057947 9ss2:AP (2.9) BS01 rna N/A GO:0000028 ... P0AG63 41542601
    1057948 9ss2:AQ (2.9) BS01 rna N/A GO:0002181 ... P0A7T7 41542601
    1057949 9ss2:AR (2.9) BS01 rna N/A GO:0002181 ... P0A7U3 41542601
    1057950 9ss2:AS (2.9) BS01 rna N/A GO:0000028 ... P0A7U7 41542601
    1057951 9ss2:AT (2.9) BS01 rna N/A GO:0000028 ... P68679 41542601
    1057952 9ss2:F1 (2.9) BS01 rna N/A GO:0003743 ... P69222 41542601
    1057953 9ss2:F3 (2.9) BS01 rna N/A GO:0003743 ... P0A707 41542601
    1057954 9ss4:B0 (2.7) BS01 rna N/A GO:0000027 ... P0A7L8 41542601
    1057955 9ss4:B1 (2.7) BS01 rna N/A GO:0000027 ... P0A7M2 41542601
    1057956 9ss4:B2 (2.7) BS01 rna N/A GO:0000027 ... P0A7M6 41542601
    1057957 9ss4:B3 (2.7) BS01 rna N/A GO:0000027 ... P0AG51 41542601
    1057958 9ss4:B4 (2.7) BS01 rna N/A GO:0002181 ... P0A7M9 41542601
    1057959 9ss4:B5 (2.7) BS01 rna N/A GO:0000027 ... P0A7N4 41542601
    1057960 9ss4:B6 (2.7) BS01 rna N/A GO:0000027 ... P0A7N9 41542601
    1057961 9ss4:B7 (2.7) BS01 rna N/A GO:0002181 ... P0A7P5 41542601
    1057962 9ss4:B8 (2.7) BS01 rna N/A GO:0002181 ... P0A7Q1 41542601
    1057963 9ss4:B9 (2.7) BS01 rna N/A GO:0002181 ... P0A7Q6 41542601
    1057964 9ss4:BA (2.7) BS01 rna N/A GO:0000027 ... P0A7L0 41542601
    1057965 9ss4:BB (2.7) BS01 rna N/A GO:0000027 ... P60422 41542601
    1057966 9ss4:BC (2.7) BS01 rna N/A GO:0000027 ... P60438 41542601
    1057967 9ss4:BD (2.7) BS01 rna N/A GO:0001070 ... P60723 41542601
    1057968 9ss4:BE (2.7) BS01 rna N/A GO:0000027 ... P62399 41542601
    1057969 9ss4:BE (2.7) BS02 rna N/A GO:0000027 ... P62399 41542601
    1057970 9ss4:BF (2.7) BS01 rna N/A GO:0000027 ... P0AG55 41542601
    1057971 9ss4:BG (2.7) BS01 rna N/A GO:0000028 ... P0A7U7 41542601
    1057972 9ss4:BI (2.7) BS01 rna N/A GO:0002181 ... P0A7R1 41542601
    1057973 9ss4:BK (2.7) BS01 rna N/A GO:0000027 ... P0A7J7 41542601
    1057974 9ss4:BM (2.7) BS01 rna N/A GO:0002181 ... P0AA10 41542601
    1057975 9ss4:BN (2.7) BS01 rna N/A GO:0002181 ... P0ADY3 41542601
    1057976 9ss4:BO (2.7) BS01 rna N/A GO:0002181 ... P02413 41542601
    1057977 9ss4:BP (2.7) BS01 rna N/A GO:0000027 ... P0ADY7 41542601
    1057978 9ss4:BP (2.7) BS02 rna N/A GO:0000027 ... P0ADY7 41542601
    1057979 9ss4:BQ (2.7) BS01 rna N/A GO:0000027 ... P0AG44 41542601
    1057980 9ss4:BR (2.7) BS01 rna N/A GO:0002181 ... P0C018 41542601
    1057981 9ss4:BR (2.7) BS02 rna N/A GO:0002181 ... P0C018 41542601
    1057982 9ss4:BS (2.7) BS01 rna N/A GO:0000027 ... P0A7K6 41542601
    1057983 9ss4:BT (2.7) BS01 rna N/A GO:0000027 ... P0A7L3 41542601
    1057984 9ss4:BU (2.7) BS01 rna N/A GO:0002181 ... P0AG48 41542601
    1057985 9ss4:BV (2.7) BS01 rna N/A GO:0002181 ... P61175 41542601
    1057986 9ss4:BW (2.7) BS01 rna N/A GO:0000027 ... P0ADZ0 41542601
    1057987 9ss4:BX (2.7) BS01 rna N/A GO:0000027 ... P60624 41542601
    1057988 9ss4:BY (2.7) BS01 rna N/A GO:0000027 ... P68919 41542601
    1057989 9ss5:B0 (2.7) BS01 rna N/A GO:0000027 ... P0A7L8 41542601
    1057990 9ss5:B1 (2.7) BS01 rna N/A GO:0000027 ... P0A7M2 41542601
    1057991 9ss5:B2 (2.7) BS01 rna N/A GO:0000027 ... P0A7M6 41542601
    1057992 9ss5:B3 (2.7) BS01 rna N/A GO:0000027 ... P0AG51 41542601
    1057993 9ss5:B4 (2.7) BS01 rna N/A GO:0002181 ... P0A7M9 41542601
    1057994 9ss5:B5 (2.7) BS01 rna N/A GO:0000027 ... P0A7N4 41542601
    1057995 9ss5:B6 (2.7) BS01 rna N/A GO:0000027 ... P0A7N9 41542601
    1057996 9ss5:B7 (2.7) BS01 rna N/A GO:0002181 ... P0A7P5 41542601
    1057997 9ss5:B8 (2.7) BS01 rna N/A GO:0002181 ... P0A7Q1 41542601
    1057998 9ss5:B9 (2.7) BS01 rna N/A GO:0002181 ... P0A7Q6 41542601
    1057999 9ss5:BB (2.7) BS01 rna N/A GO:0000027 ... P60422 41542601
    1058000 9ss5:BC (2.7) BS01 rna N/A GO:0000027 ... P60438 41542601

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).