SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5284 5285 5286 5287 5288 5289 5290 5291 5292 5293 5294 5295 5296 5297 5298 5299 5300 5301 5302 5303 5304 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1058601 9t1h:d (2.33) BS02 peptide N/A N/A N/A N/A
    1058602 9t1h:l (2.33) BS01 rna N/A N/A N/A N/A
    1058603 9t1h:l (2.33) BS02 rna N/A N/A N/A N/A
    1058604 9t1i:d (2.3) BS01 rna N/A N/A N/A N/A
    1058605 9t1i:d (2.3) BS02 peptide N/A N/A N/A N/A
    1058606 9t1i:l (2.3) BS01 rna N/A N/A N/A N/A
    1058607 9t1i:l (2.3) BS02 rna N/A N/A N/A N/A
    1058608 9t1i:l (2.3) BS03 peptide N/A N/A N/A N/A
    1058609 9t1j:d (2.23) BS01 rna N/A N/A N/A N/A
    1058610 9t1j:d (2.23) BS02 peptide N/A N/A N/A N/A
    1058611 9t1j:l (2.23) BS01 rna N/A N/A N/A N/A
    1058612 9t1j:l (2.23) BS02 rna N/A N/A N/A N/A
    1058613 9t1j:l (2.23) BS03 peptide N/A N/A N/A N/A
    1058614 9t1q:A (1.942) BS01 A1JSR N/A N/A P08581 N/A
    1058615 9t29:A (2.013) BS01 ZN N/A N/A Q6B0I6 N/A
    1058616 9t2f:A (1.68) BS01 ZN N/A N/A Q9ULU4 N/A
    1058617 9t2f:A (1.68) BS02 ZN N/A N/A Q9ULU4 N/A
    1058618 9t2f:A (1.68) BS03 ZN N/A N/A Q9ULU4 N/A
    1058619 9t2g:A (1.66) BS01 ZN N/A N/A Q9ULU4 N/A
    1058620 9t2g:A (1.66) BS02 ZN N/A N/A Q9ULU4 N/A
    1058621 9t2g:A (1.66) BS03 ZN N/A N/A Q9ULU4 N/A
    1058622 9t2i:A (1.35) BS01 ZN N/A N/A P23497 N/A
    1058623 9t2i:A (1.35) BS02 ZN N/A N/A P23497 N/A
    1058624 9t2i:A (1.35) BS03 ZN N/A N/A P23497 N/A
    1058625 9t2i:B (1.35) BS01 ZN N/A N/A P23497 N/A
    1058626 9t2i:B (1.35) BS02 ZN N/A N/A P23497 N/A
    1058627 9t2j:d (2.02) BS01 rna N/A N/A N/A N/A
    1058628 9t2j:d (2.02) BS02 peptide N/A N/A N/A N/A
    1058629 9t2j:l (2.02) BS01 rna N/A N/A N/A N/A
    1058630 9t2j:l (2.02) BS02 rna N/A N/A N/A N/A
    1058631 9t2k:d (2.06) BS01 rna N/A N/A N/A N/A
    1058632 9t2k:d (2.06) BS02 peptide N/A N/A N/A N/A
    1058633 9t2k:l (2.06) BS01 rna N/A N/A N/A N/A
    1058634 9t2k:l (2.06) BS02 rna N/A N/A N/A N/A
    1058635 9t2k:l (2.06) BS03 peptide N/A N/A N/A N/A
    1058636 9t2l:d (2.07) BS01 rna N/A N/A N/A N/A
    1058637 9t2l:d (2.07) BS02 peptide N/A N/A N/A N/A
    1058638 9t2l:l (2.07) BS01 rna N/A N/A N/A N/A
    1058639 9t2l:l (2.07) BS02 rna N/A N/A N/A N/A
    1058640 9t2l:l (2.07) BS03 peptide N/A N/A N/A N/A
    1058641 9t2m:d (2.06) BS01 rna N/A N/A N/A N/A
    1058642 9t2m:d (2.06) BS02 peptide N/A N/A N/A N/A
    1058643 9t2m:l (2.06) BS01 rna N/A N/A N/A N/A
    1058644 9t2m:l (2.06) BS02 rna N/A N/A N/A N/A
    1058645 9t2n:d (2.06) BS01 rna N/A N/A N/A N/A
    1058646 9t2n:d (2.06) BS02 peptide N/A N/A N/A N/A
    1058647 9t2n:l (2.06) BS01 rna N/A N/A N/A N/A
    1058648 9t2n:l (2.06) BS02 rna N/A N/A N/A N/A
    1058649 9t2o:d (2.07) BS01 rna N/A N/A N/A N/A
    1058650 9t2o:d (2.07) BS02 peptide N/A N/A N/A N/A
    1058651 9t2o:l (2.07) BS01 rna N/A N/A N/A N/A
    1058652 9t2o:l (2.07) BS02 rna N/A N/A N/A N/A
    1058653 9t2p:d (2.08) BS01 rna N/A N/A N/A N/A
    1058654 9t2p:d (2.08) BS02 peptide N/A N/A N/A N/A
    1058655 9t2p:l (2.08) BS01 rna N/A N/A N/A N/A
    1058656 9t2p:l (2.08) BS02 rna N/A N/A N/A N/A
    1058657 9t2q:d (2.08) BS01 rna N/A N/A N/A N/A
    1058658 9t2q:d (2.08) BS02 peptide N/A N/A N/A N/A
    1058659 9t2q:l (2.08) BS01 rna N/A N/A N/A N/A
    1058660 9t2q:l (2.08) BS02 rna N/A N/A N/A N/A
    1058661 9t2q:l (2.08) BS03 rna N/A N/A N/A N/A
    1058662 9t2q:l (2.08) BS04 peptide N/A N/A N/A N/A
    1058663 9t2r:d (2.22) BS01 rna N/A N/A N/A N/A
    1058664 9t2r:d (2.22) BS02 peptide N/A N/A N/A N/A
    1058665 9t2r:l (2.22) BS01 rna N/A N/A N/A N/A
    1058666 9t2r:l (2.22) BS02 rna N/A N/A N/A N/A
    1058667 9t2s:d (2.07) BS01 rna N/A N/A N/A N/A
    1058668 9t2s:d (2.07) BS02 peptide N/A N/A N/A N/A
    1058669 9t2s:l (2.07) BS01 rna N/A N/A N/A N/A
    1058670 9t2s:l (2.07) BS02 rna N/A N/A N/A N/A
    1058671 9t2v:A (1.665) BS01 A1JS8 N/A N/A P08581 N/A
    1058672 9t32:C (6.9) BS01 A1JTC N/A N/A P40337 N/A
    1058673 9t32:H (6.9) BS01 A1JTC N/A N/A P40337 N/A
    1058674 9t38:A (2.45) BS01 GDP N/A N/A A0ABC9II69 N/A
    1058675 9t38:C (2.45) BS01 GDP N/A GO:0000287 ... P0CE48 N/A
    1058676 9t38:D (2.45) BS01 GDP N/A N/A A0ABC9II69 N/A
    1058677 9t38:F (2.45) BS01 GDP N/A GO:0000287 ... P0CE48 N/A
    1058678 9t3c:A (2.03) BS01 GDP N/A N/A N/A N/A
    1058679 9t3c:B (2.03) BS01 GDP N/A N/A N/A N/A
    1058680 9t3c:B (2.03) BS02 MG N/A N/A N/A N/A
    1058681 9t3d:A (1.33) BS01 GNP N/A N/A N/A N/A
    1058682 9t3e:A (2.3) BS01 MG N/A N/A N/A N/A
    1058683 9t3e:A (2.3) BS02 MG N/A N/A N/A N/A
    1058684 9t3e:A (2.3) BS03 GSP N/A N/A N/A N/A
    1058685 9t3f:A (2.07) BS01 GSP N/A N/A N/A N/A
    1058686 9t3f:A (2.07) BS02 MG N/A N/A N/A N/A
    1058687 9t3q:A (1.629) BS01 A1JS8 N/A N/A P08581 N/A
    1058688 9t3x:A (2.1) BS01 peptide N/A GO:0005515 ... Q10570 41641703
    1058689 9t3y:A (3.44) BS01 CA N/A N/A P11215 N/A
    1058690 9t3y:A (3.44) BS02 CA N/A N/A P11215 N/A
    1058691 9t3y:A (3.44) BS03 MN N/A N/A P11215 N/A
    1058692 9t3y:A (3.44) BS04 CA N/A N/A P11215 N/A
    1058693 9t3y:B (3.44) BS01 MN N/A N/A P05107 N/A
    1058694 9t3y:B (3.44) BS02 CA N/A N/A P05107 N/A
    1058695 9t3y:B (3.44) BS03 CA N/A N/A P05107 N/A
    1058696 9t4r:0 (2.3) BS01 rna N/A N/A N/A 41680142
    1058697 9t4r:1 (2.3) BS01 rna N/A N/A N/A 41680142
    1058698 9t4r:2 (2.3) BS01 rna N/A N/A N/A 41680142
    1058699 9t4r:3 (2.3) BS01 rna N/A N/A N/A 41680142
    1058700 9t4r:4 (2.3) BS01 rna N/A N/A N/A 41680142
    1058701 9t4r:4 (2.3) BS02 rna N/A N/A N/A 41680142
    1058702 9t4r:B (2.3) BS01 rna N/A N/A N/A 41680142
    1058703 9t4r:C (2.3) BS01 rna N/A N/A N/A 41680142
    1058704 9t4r:D (2.3) BS01 rna N/A N/A N/A 41680142
    1058705 9t4r:E (2.3) BS01 rna N/A N/A N/A 41680142
    1058706 9t4r:F (2.3) BS01 rna N/A N/A N/A 41680142
    1058707 9t4r:G (2.3) BS01 rna N/A N/A N/A 41680142
    1058708 9t4r:H (2.3) BS01 rna N/A N/A N/A 41680142
    1058709 9t4r:I (2.3) BS01 rna N/A N/A N/A 41680142
    1058710 9t4r:I (2.3) BS02 rna N/A N/A N/A 41680142
    1058711 9t4r:J (2.3) BS01 rna N/A N/A N/A 41680142
    1058712 9t4r:K (2.3) BS01 rna N/A N/A N/A 41680142
    1058713 9t4r:L (2.3) BS01 rna N/A N/A N/A 41680142
    1058714 9t4r:M (2.3) BS01 rna N/A N/A N/A 41680142
    1058715 9t4r:M (2.3) BS02 rna N/A N/A N/A 41680142
    1058716 9t4r:N (2.3) BS01 rna N/A N/A N/A 41680142
    1058717 9t4r:O (2.3) BS01 rna N/A N/A N/A 41680142
    1058718 9t4r:O (2.3) BS02 rna N/A N/A N/A 41680142
    1058719 9t4r:P (2.3) BS01 rna N/A N/A N/A 41680142
    1058720 9t4r:Q (2.3) BS01 rna N/A N/A N/A 41680142
    1058721 9t4r:R (2.3) BS01 rna N/A N/A N/A 41680142
    1058722 9t4r:S (2.3) BS01 rna N/A N/A N/A 41680142
    1058723 9t4r:T (2.3) BS01 rna N/A N/A N/A 41680142
    1058724 9t4r:U (2.3) BS01 rna N/A N/A N/A 41680142
    1058725 9t4r:U (2.3) BS02 rna N/A N/A N/A 41680142
    1058726 9t4r:c (2.3) BS01 rna N/A N/A N/A 41680142
    1058727 9t4r:d (2.3) BS01 rna N/A N/A N/A 41680142
    1058728 9t4r:e (2.3) BS01 rna N/A N/A N/A 41680142
    1058729 9t4r:f (2.3) BS01 rna N/A N/A N/A 41680142
    1058730 9t4r:f (2.3) BS02 rna N/A N/A N/A 41680142
    1058731 9t4r:f (2.3) BS03 rna N/A N/A N/A 41680142
    1058732 9t4r:g (2.3) BS01 rna N/A N/A N/A 41680142
    1058733 9t4r:j (2.3) BS01 rna N/A N/A N/A 41680142
    1058734 9t4r:k (2.3) BS01 rna N/A N/A N/A 41680142
    1058735 9t4r:l (2.3) BS01 rna N/A N/A N/A 41680142
    1058736 9t4r:l (2.3) BS02 rna N/A N/A N/A 41680142
    1058737 9t4r:m (2.3) BS01 rna N/A N/A N/A 41680142
    1058738 9t4r:n (2.3) BS01 rna N/A N/A N/A 41680142
    1058739 9t4r:n (2.3) BS02 rna N/A N/A N/A 41680142
    1058740 9t4r:o (2.3) BS01 rna N/A N/A N/A 41680142
    1058741 9t4r:o (2.3) BS02 rna N/A N/A N/A 41680142
    1058742 9t4r:p (2.3) BS01 rna N/A N/A N/A 41680142
    1058743 9t4r:q (2.3) BS01 rna N/A N/A N/A 41680142
    1058744 9t4r:r (2.3) BS01 rna N/A N/A N/A 41680142
    1058745 9t4r:s (2.3) BS01 rna N/A N/A N/A 41680142
    1058746 9t4r:t (2.3) BS01 rna N/A N/A N/A 41680142
    1058747 9t4r:u (2.3) BS01 rna N/A N/A N/A 41680142
    1058748 9t4r:v (2.3) BS01 rna N/A N/A N/A 41680142
    1058749 9t4r:v (2.3) BS02 rna N/A N/A N/A 41680142
    1058750 9t4r:w (2.3) BS01 rna N/A N/A N/A 41680142
    1058751 9t4r:x (2.3) BS01 rna N/A N/A N/A 41680142
    1058752 9t4r:y (2.3) BS01 rna N/A N/A N/A 41680142
    1058753 9t4r:y (2.3) BS02 rna N/A N/A N/A 41680142
    1058754 9t4r:z (2.3) BS01 rna N/A N/A N/A 41680142
    1058755 9t4v:A (6.6) BS01 dna N/A GO:0000786 ... P84233 N/A
    1058756 9t4v:A (6.6) BS02 dna N/A GO:0000786 ... P84233 N/A
    1058757 9t4v:B (6.6) BS01 dna N/A GO:0000786 ... P62799 N/A
    1058758 9t4v:B (6.6) BS02 dna N/A GO:0000786 ... P62799 N/A
    1058759 9t4v:C (6.6) BS01 dna N/A GO:0000786 ... P06897 N/A
    1058760 9t4v:C (6.6) BS02 dna N/A GO:0000786 ... P06897 N/A
    1058761 9t4v:D (6.6) BS01 dna N/A GO:0000786 ... P02281 N/A
    1058762 9t4v:D (6.6) BS02 dna N/A GO:0000786 ... P02281 N/A
    1058763 9t4v:E (6.6) BS01 dna N/A GO:0000786 ... P84233 N/A
    1058764 9t4v:E (6.6) BS02 dna N/A GO:0000786 ... P84233 N/A
    1058765 9t4v:F (6.6) BS01 dna N/A GO:0000786 ... P62799 N/A
    1058766 9t4v:F (6.6) BS02 dna N/A GO:0000786 ... P62799 N/A
    1058767 9t4v:G (6.6) BS01 dna N/A GO:0000786 ... P06897 N/A
    1058768 9t4v:G (6.6) BS02 dna N/A GO:0000786 ... P06897 N/A
    1058769 9t4v:H (6.6) BS01 dna N/A GO:0000786 ... P02281 N/A
    1058770 9t4v:H (6.6) BS02 dna N/A GO:0000786 ... P02281 N/A
    1058771 9t4v:K (6.6) BS01 dna N/A GO:0000166 ... Q86WJ1 N/A
    1058772 9t4v:K (6.6) BS02 dna N/A GO:0000166 ... Q86WJ1 N/A
    1058773 9t56:A (2.81) BS01 rna N/A N/A N/A 41642947
    1058774 9t56:A (2.81) BS02 rna N/A N/A N/A 41642947
    1058775 9t56:A (2.81) BS03 dna N/A N/A N/A 41642947
    1058776 9t56:A (2.81) BS04 dna N/A N/A N/A 41642947
    1058777 9t56:A (2.81) BS05 dna N/A N/A N/A 41642947
    1058778 9t56:B (2.81) BS01 rna N/A N/A N/A 41642947
    1058779 9t56:B (2.81) BS02 rna N/A N/A N/A 41642947
    1058780 9t56:B (2.81) BS03 dna N/A N/A N/A 41642947
    1058781 9t56:B (2.81) BS04 dna N/A N/A N/A 41642947
    1058782 9t56:B (2.81) BS05 MG N/A N/A N/A 41642947
    1058783 9t56:C (2.81) BS01 rna N/A N/A N/A 41642947
    1058784 9t56:C (2.81) BS02 rna N/A N/A N/A 41642947
    1058785 9t56:C (2.81) BS03 dna N/A N/A N/A 41642947
    1058786 9t56:C (2.81) BS04 dna N/A N/A N/A 41642947
    1058787 9t56:C (2.81) BS05 dna N/A N/A N/A 41642947
    1058788 9t56:D (2.81) BS01 rna N/A N/A N/A 41642947
    1058789 9t56:D (2.81) BS02 rna N/A N/A N/A 41642947
    1058790 9t56:D (2.81) BS03 dna N/A N/A N/A 41642947
    1058791 9t56:D (2.81) BS04 dna N/A N/A N/A 41642947
    1058792 9t56:D (2.81) BS05 MG N/A N/A N/A 41642947
    1058793 9t5s:A (1.74) BS01 peptide N/A N/A Q07869 41592562
    1058794 9t5s:A (1.74) BS02 A1JTY N/A N/A Q07869 41592562
    1058795 9t5s:C (1.74) BS01 peptide N/A N/A Q07869 41592562
    1058796 9t5s:C (1.74) BS02 peptide N/A N/A Q07869 41592562
    1058797 9t5s:C (1.74) BS03 A1JTY N/A N/A Q07869 41592562
    1058798 9t5v:A (3.06) BS01 CA N/A N/A P11215 N/A
    1058799 9t5v:A (3.06) BS02 CA N/A N/A P11215 N/A
    1058800 9t5v:A (3.06) BS03 MN N/A N/A P11215 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).