SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1059001 9tbe:D (2.8) BS01 RET N/A N/A N/A 41332690
    1059002 9tbf:A (3.3) BS01 RET N/A N/A N/A 41332690
    1059003 9tcb:A (1.9) BS01 DQV N/A N/A Q460N3 N/A
    1059004 9tcb:B (1.9) BS01 NCA N/A N/A Q460N3 N/A
    1059005 9tdv:A (2.0) BS01 GLC N/A N/A A0A179H0Q0 41617004
    1059006 9tdv:A (2.0) BS02 GLA N/A N/A A0A179H0Q0 41617004
    1059007 9tdv:A (2.0) BS03 MAN N/A N/A A0A179H0Q0 41617004
    1059008 9tdv:A (2.0) BS04 FRU N/A N/A A0A179H0Q0 41617004
    1059009 9tdv:B (2.0) BS01 MAN N/A N/A A0A179H0Q0 41617004
    1059010 9tdv:B (2.0) BS02 FRU N/A N/A A0A179H0Q0 41617004
    1059011 9tdv:B (2.0) BS03 GLC N/A N/A A0A179H0Q0 41617004
    1059012 9tdv:B (2.0) BS04 GLA N/A N/A A0A179H0Q0 41617004
    1059013 9tdv:C (2.0) BS01 MAN N/A N/A A0A179H0Q0 41617004
    1059014 9tdv:C (2.0) BS02 FRU N/A N/A A0A179H0Q0 41617004
    1059015 9tdv:C (2.0) BS03 GLC N/A N/A A0A179H0Q0 41617004
    1059016 9tdv:C (2.0) BS04 GLA N/A N/A A0A179H0Q0 41617004
    1059017 9tdv:D (2.0) BS01 MAN N/A N/A A0A179H0Q0 41617004
    1059018 9tdv:D (2.0) BS02 GLC N/A N/A A0A179H0Q0 41617004
    1059019 9tdv:D (2.0) BS03 FRU N/A N/A A0A179H0Q0 41617004
    1059020 9tdw:A (2.4) BS01 MAN N/A N/A A0A179H0Q0 41617004
    1059021 9tdw:A (2.4) BS02 FRU N/A N/A A0A179H0Q0 41617004
    1059022 9tdw:B (2.4) BS01 MAN N/A N/A A0A179H0Q0 41617004
    1059023 9tdw:B (2.4) BS02 FRU N/A N/A A0A179H0Q0 41617004
    1059024 9tdw:C (2.4) BS01 MAN N/A N/A A0A179H0Q0 41617004
    1059025 9tdw:C (2.4) BS02 FRU N/A N/A A0A179H0Q0 41617004
    1059026 9tdw:D (2.4) BS01 MAN N/A N/A A0A179H0Q0 41617004
    1059027 9tdw:D (2.4) BS02 FRU N/A N/A A0A179H0Q0 41617004
    1059028 9tdx:A (2.004) BS01 MAN N/A N/A A0A179H0Q0 41617004
    1059029 9tdx:A (2.004) BS02 GLC N/A N/A A0A179H0Q0 41617004
    1059030 9tdx:A (2.004) BS03 FRU N/A N/A A0A179H0Q0 41617004
    1059031 9tdx:B (2.004) BS01 MAN N/A N/A A0A179H0Q0 41617004
    1059032 9tdx:B (2.004) BS02 GLC N/A N/A A0A179H0Q0 41617004
    1059033 9tdx:B (2.004) BS03 FRU N/A N/A A0A179H0Q0 41617004
    1059034 9tdx:C (2.004) BS01 GLC N/A N/A A0A179H0Q0 41617004
    1059035 9tdx:C (2.004) BS02 FRU N/A N/A A0A179H0Q0 41617004
    1059036 9tdx:D (2.004) BS01 MAN N/A N/A A0A179H0Q0 41617004
    1059037 9tdx:D (2.004) BS02 GLC N/A N/A A0A179H0Q0 41617004
    1059038 9tdx:D (2.004) BS03 FRU N/A N/A A0A179H0Q0 41617004
    1059039 9teb:A (1.3) BS01 NXL N/A N/A A0A5R8NCK8 N/A
    1059040 9teh:A (7.23) BS01 dna N/A N/A Q9T221 N/A
    1059041 9teh:A (7.23) BS02 dna N/A N/A Q9T221 N/A
    1059042 9teh:A (7.23) BS03 ZN N/A N/A Q9T221 N/A
    1059043 9teh:B (7.23) BS01 dna N/A N/A Q9T221 N/A
    1059044 9teh:B (7.23) BS02 dna N/A N/A Q9T221 N/A
    1059045 9teh:B (7.23) BS03 ZN N/A N/A Q9T221 N/A
    1059046 9teh:C (7.23) BS01 dna N/A N/A Q9T221 N/A
    1059047 9teh:C (7.23) BS02 dna N/A N/A Q9T221 N/A
    1059048 9teh:C (7.23) BS03 ZN N/A N/A Q9T221 N/A
    1059049 9teh:D (7.23) BS01 dna N/A N/A Q9T221 N/A
    1059050 9teh:D (7.23) BS02 dna N/A N/A Q9T221 N/A
    1059051 9teh:D (7.23) BS03 ZN N/A N/A Q9T221 N/A
    1059052 9teh:I (7.23) BS01 ZN N/A GO:0032359 ... Q9T216 N/A
    1059053 9teh:J (7.23) BS01 ZN N/A GO:0032359 ... Q9T216 N/A
    1059054 9teh:K (7.23) BS01 ZN N/A GO:0032359 ... Q9T216 N/A
    1059055 9teh:L (7.23) BS01 ZN N/A GO:0032359 ... Q9T216 N/A
    1059056 9tel:A (1.436) BS01 rna N/A GO:0003724 ... G0YYQ5 N/A
    1059057 9tel:A (1.436) BS02 rna N/A GO:0003724 ... G0YYQ5 N/A
    1059058 9tel:A (1.436) BS03 ZN N/A GO:0003724 ... G0YYQ5 N/A
    1059059 9tel:A (1.436) BS04 ADP N/A GO:0003724 ... G0YYQ5 N/A
    1059060 9tel:A (1.436) BS05 ALF N/A GO:0003724 ... G0YYQ5 N/A
    1059061 9ten:B (3.11) BS01 dna N/A N/A Q9T221 N/A
    1059062 9ten:B (3.11) BS02 dna N/A N/A Q9T221 N/A
    1059063 9ten:B (3.11) BS03 ZN N/A N/A Q9T221 N/A
    1059064 9ten:J (3.11) BS01 ZN N/A GO:0032359 ... Q9T216 N/A
    1059065 9teo:A (3.27) BS01 dna N/A N/A Q9T221 N/A
    1059066 9teo:A (3.27) BS02 dna N/A N/A Q9T221 N/A
    1059067 9teo:A (3.27) BS03 ZN N/A N/A Q9T221 N/A
    1059068 9teo:I (3.27) BS01 ZN N/A GO:0032359 ... Q9T216 N/A
    1059069 9tep:A (3.67) BS01 dna N/A N/A Q9T221 N/A
    1059070 9tep:A (3.67) BS02 dna N/A N/A Q9T221 N/A
    1059071 9tep:A (3.67) BS03 ZN N/A N/A Q9T221 N/A
    1059072 9tep:B (3.67) BS01 dna N/A N/A Q9T221 N/A
    1059073 9tep:B (3.67) BS02 dna N/A N/A Q9T221 N/A
    1059074 9tep:B (3.67) BS03 ZN N/A N/A Q9T221 N/A
    1059075 9tep:I (3.67) BS01 ZN N/A GO:0032359 ... Q9T216 N/A
    1059076 9tep:J (3.67) BS01 ZN N/A GO:0032359 ... Q9T216 N/A
    1059077 9teq:A (3.0) BS01 dna N/A N/A Q9T221 N/A
    1059078 9teq:A (3.0) BS02 dna N/A N/A Q9T221 N/A
    1059079 9teq:A (3.0) BS03 ZN N/A N/A Q9T221 N/A
    1059080 9teq:I (3.0) BS01 ZN N/A GO:0032359 ... Q9T216 N/A
    1059081 9ter:B (3.13) BS01 dna N/A N/A Q9T221 N/A
    1059082 9ter:B (3.13) BS02 dna N/A N/A Q9T221 N/A
    1059083 9ter:B (3.13) BS03 ZN N/A N/A Q9T221 N/A
    1059084 9ter:J (3.13) BS01 ZN N/A GO:0032359 ... Q9T216 N/A
    1059085 9tf5:A (1.63) BS01 ZN N/A N/A P78324 41497624
    1059086 9tf5:C (1.63) BS01 ZN N/A N/A P78324 41497624
    1059087 9tfx:AAAA (1.7) BS01 IHP N/A N/A Q08467 N/A
    1059088 9tfy:A (5.5) BS01 IHP N/A N/A Q08467 N/A
    1059089 9tfy:B (5.5) BS01 IHP N/A N/A Q08467 N/A
    1059090 9tfy:C (5.5) BS01 ZN N/A N/A P40228 N/A
    1059091 9tfy:D (5.5) BS01 ZN N/A N/A P40228 N/A
    1059092 9tgg:A (3.18) BS01 peptide N/A GO:0009055 ... P00165 36638176
    1059093 9tgg:A (3.18) BS02 HEM N/A GO:0009055 ... P00165 36638176
    1059094 9tgg:A (3.18) BS03 HEM N/A GO:0009055 ... P00165 36638176
    1059095 9tgg:A (3.18) BS04 HEC N/A GO:0009055 ... P00165 36638176
    1059096 9tgg:A (3.18) BS05 CLA N/A GO:0009055 ... P00165 36638176
    1059097 9tgg:B (3.18) BS01 CLA N/A GO:0009055 ... P00166 36638176
    1059098 9tgg:C (3.18) BS01 peptide N/A GO:0009055 ... P16013 36638176
    1059099 9tgg:C (3.18) BS02 HEC N/A GO:0009055 ... P16013 36638176
    1059100 9tgg:D (3.18) BS01 FES N/A N/A P08980 36638176
    1059101 9tgg:E (3.18) BS01 peptide N/A GO:0009055 ... Q9M3L0 36638176
    1059102 9tgg:I (3.18) BS01 peptide N/A GO:0009055 ... P00165 36638176
    1059103 9tgg:I (3.18) BS02 HEM N/A GO:0009055 ... P00165 36638176
    1059104 9tgg:I (3.18) BS03 HEM N/A GO:0009055 ... P00165 36638176
    1059105 9tgg:I (3.18) BS04 HEC N/A GO:0009055 ... P00165 36638176
    1059106 9tgg:J (3.18) BS01 CLA N/A GO:0009055 ... P00166 36638176
    1059107 9tgg:K (3.18) BS01 peptide N/A GO:0009055 ... P16013 36638176
    1059108 9tgg:K (3.18) BS02 HEC N/A GO:0009055 ... P16013 36638176
    1059109 9tgg:L (3.18) BS01 FES N/A N/A P08980 36638176
    1059110 9tgg:N (3.18) BS01 peptide N/A GO:0009535 ... P80883 36638176
    1059111 9tgg:Q (3.18) BS01 CU N/A N/A P00289 36638176
    1059112 9tgn:B (2.55) BS01 dna N/A N/A N/A 41415447
    1059113 9tgn:C (2.55) BS01 dna N/A N/A N/A 41415447
    1059114 9tgn:D (2.55) BS01 dna N/A N/A N/A 41415447
    1059115 9tgn:F (2.55) BS01 dna N/A N/A N/A 41415447
    1059116 9tgn:G (2.55) BS01 dna N/A N/A N/A 41415447
    1059117 9tgn:H (2.55) BS01 dna N/A N/A N/A 41415447
    1059118 9tgn:J (2.55) BS01 dna N/A N/A N/A 41415447
    1059119 9tgn:K (2.55) BS01 dna N/A N/A N/A 41415447
    1059120 9tgn:L (2.55) BS01 dna N/A N/A N/A 41415447
    1059121 9tgo:A (2.8) BS01 dna N/A N/A N/A 41415447
    1059122 9tgo:B (2.8) BS01 dna N/A N/A N/A 41415447
    1059123 9tgo:C (2.8) BS01 dna N/A N/A N/A 41415447
    1059124 9tgo:D (2.8) BS01 dna N/A N/A N/A 41415447
    1059125 9tgo:E (2.8) BS01 dna N/A N/A N/A 41415447
    1059126 9tgo:F (2.8) BS01 dna N/A N/A N/A 41415447
    1059127 9tgo:I (2.8) BS01 dna N/A N/A N/A 41415447
    1059128 9tgo:K (2.8) BS01 dna N/A N/A N/A 41415447
    1059129 9tgo:L (2.8) BS01 dna N/A N/A N/A 41415447
    1059130 9tgo:N (2.8) BS01 dna N/A N/A N/A 41415447
    1059131 9tgw:A (2.67) BS01 dna N/A N/A N/A 41415447
    1059132 9tgw:B (2.67) BS01 dna N/A N/A N/A 41415447
    1059133 9tgw:C (2.67) BS01 dna N/A N/A N/A 41415447
    1059134 9tgw:D (2.67) BS01 dna N/A N/A N/A 41415447
    1059135 9tgw:E (2.67) BS01 dna N/A N/A N/A 41415447
    1059136 9tgw:F (2.67) BS01 dna N/A N/A N/A 41415447
    1059137 9th6:A (2.267) BS01 ZN N/A N/A P0DTD1 N/A
    1059138 9th6:A (2.267) BS02 ZN N/A N/A P0DTD1 N/A
    1059139 9th6:A (2.267) BS03 ZN N/A N/A P0DTD1 N/A
    1059140 9thj:A (0.91) BS01 A1JV9 N/A N/A Q2LG68 41531980
    1059141 9tho:AAA (2.55) BS01 BCT N/A GO:0005506 ... P02787 41545537
    1059142 9tho:AAA (2.55) BS02 BCT N/A GO:0005506 ... P02787 41545537
    1059143 9tho:AAA (2.55) BS03 BCT N/A GO:0005506 ... P02787 41545537
    1059144 9tho:AAA (2.55) BS04 BCT N/A GO:0005506 ... P02787 41545537
    1059145 9tho:AAA (2.55) BS05 BCT N/A GO:0005506 ... P02787 41545537
    1059146 9tho:AAA (2.55) BS06 BCT N/A GO:0005506 ... P02787 41545537
    1059147 9tho:AAA (2.55) BS07 FE N/A GO:0005506 ... P02787 41545537
    1059148 9tho:AAA (2.55) BS08 A1JJT N/A GO:0005506 ... P02787 41545537
    1059149 9thq:AAA (2.44) BS01 FE N/A GO:0005506 ... P02787 41545537
    1059150 9thq:AAA (2.44) BS02 BCT N/A GO:0005506 ... P02787 41545537
    1059151 9thq:AAA (2.44) BS03 BCT N/A GO:0005506 ... P02787 41545537
    1059152 9thq:AAA (2.44) BS04 BCT N/A GO:0005506 ... P02787 41545537
    1059153 9thr:AAA (3.2) BS01 FE N/A GO:0005506 ... P02787 41545537
    1059154 9thr:AAA (3.2) BS02 BCT N/A GO:0005506 ... P02787 41545537
    1059155 9thr:AAA (3.2) BS03 BCT N/A GO:0005506 ... P02787 41545537
    1059156 9ths:A (1.54) BS01 HEM N/A GO:0005737 ... Q43758 N/A
    1059157 9ths:A (1.54) BS02 CA N/A GO:0005737 ... Q43758 N/A
    1059158 9ti1:A (1.55) BS01 ZN N/A GO:0004063 ... P0A434 41705832
    1059159 9ti1:A (1.55) BS02 ZN N/A GO:0004063 ... P0A434 41705832
    1059160 9ti1:B (1.55) BS01 ZN N/A GO:0004063 ... P0A434 41705832
    1059161 9ti1:B (1.55) BS02 ZN N/A GO:0004063 ... P0A434 41705832
    1059162 9ti2:A (1.69) BS01 ZN N/A GO:0004063 ... P0A434 41705832
    1059163 9ti2:A (1.69) BS02 ZN N/A GO:0004063 ... P0A434 41705832
    1059164 9ti2:B (1.69) BS01 ZN N/A GO:0004063 ... P0A434 41705832
    1059165 9ti2:B (1.69) BS02 ZN N/A GO:0004063 ... P0A434 41705832
    1059166 9ti2:C (1.69) BS01 ZN N/A GO:0004063 ... P0A434 41705832
    1059167 9ti2:C (1.69) BS02 ZN N/A GO:0004063 ... P0A434 41705832
    1059168 9ti2:D (1.69) BS01 ZN N/A GO:0004063 ... P0A434 41705832
    1059169 9ti2:D (1.69) BS02 ZN N/A GO:0004063 ... P0A434 41705832
    1059170 9ti2:E (1.69) BS01 ZN N/A GO:0004063 ... P0A434 41705832
    1059171 9ti2:E (1.69) BS02 ZN N/A GO:0004063 ... P0A434 41705832
    1059172 9ti2:F (1.69) BS01 ZN N/A GO:0004063 ... P0A434 41705832
    1059173 9ti2:F (1.69) BS02 ZN N/A GO:0004063 ... P0A434 41705832
    1059174 9ti4:C (2.66) BS01 SF4 N/A GO:0005515 ... P49821 41519940
    1059175 9ti4:C (2.66) BS02 FMN N/A GO:0005515 ... P49821 41519940
    1059176 9ti4:D (2.66) BS01 SF4 N/A N/A O00217 41519940
    1059177 9ti4:D (2.66) BS02 SF4 N/A N/A O00217 41519940
    1059178 9ti4:D (2.66) BS03 PLX N/A N/A O00217 41519940
    1059179 9ti4:E (2.66) BS01 SF4 N/A N/A O75251 41519940
    1059180 9ti4:E (2.66) BS02 PLX N/A N/A O75251 41519940
    1059181 9ti4:F (2.66) BS01 8Q1 N/A GO:0005739 ... P56556 41519940
    1059182 9ti4:J (2.66) BS01 NDP N/A GO:0003954 ... Q16795 41519940
    1059183 9ti4:M (2.66) BS01 SF4 N/A GO:0005515 ... P28331 41519940
    1059184 9ti4:M (2.66) BS02 SF4 N/A GO:0005515 ... P28331 41519940
    1059185 9ti4:M (2.66) BS03 FES N/A GO:0005515 ... P28331 41519940
    1059186 9ti4:O (2.66) BS01 FES N/A N/A P19404 41519940
    1059187 9ti4:Q (2.66) BS01 SF4 N/A GO:0003954 ... O75306 41519940
    1059188 9ti4:T (2.66) BS01 ZN N/A N/A O75380 41519940
    1059189 9ti4:U (2.66) BS01 PLX N/A GO:0005515 ... O95167 41519940
    1059190 9ti4:V (2.66) BS01 PLX N/A GO:0005515 ... Q86Y39 41519940
    1059191 9ti4:X (2.66) BS01 8Q1 N/A N/A O14561 41519940
    1059192 9ti4:g (2.66) BS01 PLX N/A GO:0005515 ... O95298 41519940
    1059193 9ti4:g (2.66) BS02 PLX N/A GO:0005515 ... O95298 41519940
    1059194 9ti4:i (2.66) BS01 PLX N/A GO:0001666 ... P03891 41519940
    1059195 9ti4:j (2.66) BS01 PLX N/A GO:0005515 ... P03897 41519940
    1059196 9ti4:o (2.66) BS01 PLX N/A GO:0005739 ... O95168 41519940
    1059197 9ti4:p (2.66) BS01 8Q1 N/A GO:0005515 ... Q9Y6M9 41519940
    1059198 9ti4:r (2.66) BS01 PLX N/A GO:0001666 ... P03905 41519940
    1059199 9ti4:s (2.66) BS01 PLX N/A GO:0003954 ... P03886 41519940
    1059200 9ti4:w (2.66) BS01 DGT N/A GO:0005737 ... O95299 41519940

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).