SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1061401 9uks:B (2.33) BS01 1N7 N/A GO:0003677 ... Q5SHR6 41094128
    1061402 9uks:C (2.33) BS01 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061403 9uks:C (2.33) BS02 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061404 9uks:D (2.33) BS01 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061405 9uks:D (2.33) BS02 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061406 9uks:D (2.33) BS03 1N7 N/A GO:0000287 ... Q8RQE8 41094128
    1061407 9uks:D (2.33) BS04 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061408 9uks:D (2.33) BS05 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061409 9uks:D (2.33) BS06 MG N/A GO:0000287 ... Q8RQE8 41094128
    1061410 9uks:F (2.33) BS01 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061411 9uks:F (2.33) BS02 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061412 9ukt:B (2.77) BS01 1N7 N/A GO:0003677 ... Q5SHR6 41094128
    1061413 9ukt:C (2.77) BS01 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061414 9ukt:C (2.77) BS02 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061415 9ukt:C (2.77) BS03 rna N/A GO:0003677 ... Q8RQE9 41094128
    1061416 9ukt:D (2.77) BS01 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061417 9ukt:D (2.77) BS02 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061418 9ukt:D (2.77) BS03 rna N/A GO:0000287 ... Q8RQE8 41094128
    1061419 9ukt:D (2.77) BS04 1N7 N/A GO:0000287 ... Q8RQE8 41094128
    1061420 9ukt:D (2.77) BS05 CTP N/A GO:0000287 ... Q8RQE8 41094128
    1061421 9ukt:D (2.77) BS06 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061422 9ukt:D (2.77) BS07 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061423 9ukt:D (2.77) BS08 MG N/A GO:0000287 ... Q8RQE8 41094128
    1061424 9ukt:F (2.77) BS01 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061425 9ukt:F (2.77) BS02 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061426 9uku:B (2.73) BS01 1N7 N/A GO:0003677 ... Q5SHR6 41094128
    1061427 9uku:C (2.73) BS01 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061428 9uku:C (2.73) BS02 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061429 9uku:C (2.73) BS03 A1IF9 N/A GO:0003677 ... Q8RQE9 41094128
    1061430 9uku:D (2.73) BS01 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061431 9uku:D (2.73) BS02 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061432 9uku:D (2.73) BS03 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061433 9uku:D (2.73) BS04 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061434 9uku:D (2.73) BS05 MG N/A GO:0000287 ... Q8RQE8 41094128
    1061435 9uku:D (2.73) BS06 1N7 N/A GO:0000287 ... Q8RQE8 41094128
    1061436 9uku:F (2.73) BS01 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061437 9uku:F (2.73) BS02 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061438 9ul0:B (1.71) BS01 HY1 N/A N/A Q60136 N/A
    1061439 9ul0:B (1.71) BS02 CA N/A N/A Q60136 N/A
    1061440 9ul0:B (1.71) BS03 CA N/A N/A Q60136 N/A
    1061441 9ul1:A (2.323) BS01 peptide N/A N/A A0A286S063 40653219
    1061442 9uls:B (2.5) BS01 1N7 N/A GO:0003677 ... Q5SHR6 41094128
    1061443 9uls:C (2.5) BS01 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061444 9uls:C (2.5) BS02 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061445 9uls:C (2.5) BS03 A1L89 N/A GO:0003677 ... Q8RQE9 41094128
    1061446 9uls:C (2.5) BS04 C5P N/A GO:0003677 ... Q8RQE9 41094128
    1061447 9uls:D (2.5) BS01 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061448 9uls:D (2.5) BS02 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061449 9uls:D (2.5) BS03 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061450 9uls:D (2.5) BS04 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061451 9uls:D (2.5) BS05 MG N/A GO:0000287 ... Q8RQE8 41094128
    1061452 9uls:D (2.5) BS06 A1L89 N/A GO:0000287 ... Q8RQE8 41094128
    1061453 9uls:F (2.5) BS01 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061454 9uls:F (2.5) BS02 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061455 9ult:B (2.48) BS01 1N7 N/A GO:0003677 ... Q5SHR6 41094128
    1061456 9ult:C (2.48) BS01 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061457 9ult:C (2.48) BS02 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061458 9ult:C (2.48) BS03 A1L89 N/A GO:0003677 ... Q8RQE9 41094128
    1061459 9ult:D (2.48) BS01 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061460 9ult:D (2.48) BS02 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061461 9ult:D (2.48) BS03 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061462 9ult:D (2.48) BS04 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061463 9ult:D (2.48) BS05 MG N/A GO:0000287 ... Q8RQE8 41094128
    1061464 9ult:D (2.48) BS06 1N7 N/A GO:0000287 ... Q8RQE8 41094128
    1061465 9ult:D (2.48) BS07 UTP N/A GO:0000287 ... Q8RQE8 41094128
    1061466 9ult:F (2.48) BS01 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061467 9ult:F (2.48) BS02 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061468 9uma:B (2.77) BS01 1N7 N/A GO:0003677 ... Q5SHR6 41094128
    1061469 9uma:C (2.77) BS01 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061470 9uma:C (2.77) BS02 dna N/A GO:0003677 ... Q8RQE9 41094128
    1061471 9uma:C (2.77) BS03 A1IF9 N/A GO:0003677 ... Q8RQE9 41094128
    1061472 9uma:C (2.77) BS04 C5P N/A GO:0003677 ... Q8RQE9 41094128
    1061473 9uma:D (2.77) BS01 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061474 9uma:D (2.77) BS02 dna N/A GO:0000287 ... Q8RQE8 41094128
    1061475 9uma:D (2.77) BS03 1N7 N/A GO:0000287 ... Q8RQE8 41094128
    1061476 9uma:D (2.77) BS04 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061477 9uma:D (2.77) BS05 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1061478 9uma:D (2.77) BS06 MG N/A GO:0000287 ... Q8RQE8 41094128
    1061479 9uma:F (2.77) BS01 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061480 9uma:F (2.77) BS02 dna N/A GO:0003677 ... Q5SKW1 41094128
    1061481 9umg:D (3.04) BS01 IHP N/A N/A P47075 41535663
    1061482 9umg:D (3.04) BS02 IHP N/A N/A P47075 41535663
    1061483 9umj:C (3.38) BS01 peptide N/A GO:0001850 ... O09047
    P08173
    40501890
    1061484 9umr:D (3.15) BS01 peptide N/A GO:0001774 ... P08173
    P21730
    40501890
    1061485 9umx:A (3.2) BS01 peptide N/A GO:0001774 ... P08173
    P21730
    40501890
    1061486 9umz:A (3.98) BS01 rna N/A GO:0003723 ... P0DW82 N/A
    1061487 9umz:B (3.98) BS01 rna N/A GO:0003723 ... P0DW82 N/A
    1061488 9umz:C (3.98) BS01 rna N/A GO:0003723 ... P0DW82 N/A
    1061489 9umz:D (3.98) BS01 rna N/A GO:0003723 ... P0DW82 N/A
    1061490 9umz:E (3.98) BS01 rna N/A GO:0003723 ... P0DW82 N/A
    1061491 9un3:A (3.37) BS01 GLY N/A N/A P35438 41673155
    1061492 9un3:B (3.37) BS01 GLU N/A N/A Q01097 41673155
    1061493 9un3:C (3.37) BS01 GLY N/A N/A P35438 41673155
    1061494 9un3:D (3.37) BS01 GLU N/A N/A Q01097 41673155
    1061495 9unj:A (3.93) BS01 GLY N/A N/A P35438 41673155
    1061496 9unj:B (3.93) BS01 GLU N/A N/A P35436 41673155
    1061497 9unj:C (3.93) BS01 GLY N/A N/A P35438 41673155
    1061498 9unj:D (3.93) BS01 JC9 N/A N/A P35436 41673155
    1061499 9unj:D (3.93) BS02 GLU N/A N/A P35436 41673155
    1061500 9unk:A (3.37) BS01 GLY N/A N/A P35438 41673155
    1061501 9unk:B (3.37) BS01 GLU N/A N/A Q01097 41673155
    1061502 9unk:C (3.37) BS01 GLY N/A N/A P35438 41673155
    1061503 9unk:D (3.37) BS01 GLU N/A N/A Q01097 41673155
    1061504 9unm:D (6.37) BS01 JC9 N/A N/A P35436 41673155
    1061505 9unn:A (3.29) BS01 GLY N/A N/A P35438 41673155
    1061506 9unn:B (3.29) BS01 GLU N/A N/A P35436 41673155
    1061507 9unn:C (3.29) BS01 GLY N/A N/A P35438 41673155
    1061508 9unn:D (3.29) BS01 JC9 N/A N/A P35436 41673155
    1061509 9unn:D (3.29) BS02 GLU N/A N/A P35436 41673155
    1061510 9uno:A (3.55) BS01 GLY N/A N/A P35438 41673155
    1061511 9uno:B (3.55) BS01 GLU N/A N/A P35436 41673155
    1061512 9uno:C (3.55) BS01 GLY N/A N/A P35438 41673155
    1061513 9uno:D (3.55) BS01 GLU N/A N/A P35436 41673155
    1061514 9unp:A (3.27) BS01 GLY N/A N/A P35438 41673155
    1061515 9unp:B (3.27) BS01 GLU N/A N/A P35436 41673155
    1061516 9unp:C (3.27) BS01 GLY N/A N/A P35438 41673155
    1061517 9unp:D (3.27) BS01 GLU N/A N/A Q01097 41673155
    1061518 9unq:A (3.2) BS01 GLY N/A N/A P35438 41673155
    1061519 9unq:B (3.2) BS01 GLU N/A N/A P35436 41673155
    1061520 9unq:C (3.2) BS01 GLY N/A N/A P35438 41673155
    1061521 9unq:D (3.2) BS01 GLU N/A N/A Q01097 41673155
    1061522 9unr:A (2.98) BS01 GLY N/A N/A P35438 41673155
    1061523 9unr:B (2.98) BS01 GLU N/A N/A P35436 41673155
    1061524 9unr:C (2.98) BS01 GLY N/A N/A P35438 41673155
    1061525 9unr:D (2.98) BS01 GLU N/A N/A Q01097 41673155
    1061526 9unr:D (2.98) BS02 JC9 N/A N/A Q01097 41673155
    1061527 9uns:A (1.91) BS01 GAL N/A GO:0004553 ... A0ABD7ANA7 40846838
    1061528 9uns:A (1.91) BS02 GLC N/A GO:0004553 ... A0ABD7ANA7 40846838
    1061529 9uns:A (1.91) BS03 A1EAX N/A GO:0004553 ... A0ABD7ANA7 40846838
    1061530 9unv:A (3.12) BS01 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061531 9unv:A (3.12) BS02 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061532 9unv:A (3.12) BS03 P0E N/A GO:0005515 ... Q86UW1 41606328
    1061533 9unv:A (3.12) BS04 LPE N/A GO:0005515 ... Q86UW1 41606328
    1061534 9unv:A (3.12) BS05 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061535 9unv:A (3.12) BS06 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061536 9unv:A (3.12) BS07 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061537 9unv:A (3.12) BS08 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061538 9unv:A (3.12) BS09 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061539 9unv:A (3.12) BS10 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061540 9unv:A (3.12) BS11 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061541 9unv:A (3.12) BS12 A1EPX N/A GO:0005515 ... Q86UW1 41606328
    1061542 9unv:A (3.12) BS13 76F N/A GO:0005515 ... Q86UW1 41606328
    1061543 9unv:A (3.12) BS14 76F N/A GO:0005515 ... Q86UW1 41606328
    1061544 9unv:A (3.12) BS15 76F N/A GO:0005515 ... Q86UW1 41606328
    1061545 9unv:A (3.12) BS16 76F N/A GO:0005515 ... Q86UW1 41606328
    1061546 9unv:B (3.12) BS01 CLR N/A GO:0005515 ... Q86UW2 41606328
    1061547 9unv:B (3.12) BS02 CLR N/A GO:0005515 ... Q86UW2 41606328
    1061548 9unv:C (3.12) BS01 76F N/A GO:0005515 ... Q86UW1 41606328
    1061549 9unv:C (3.12) BS02 76F N/A GO:0005515 ... Q86UW1 41606328
    1061550 9unv:C (3.12) BS03 76F N/A GO:0005515 ... Q86UW1 41606328
    1061551 9unv:C (3.12) BS04 76F N/A GO:0005515 ... Q86UW1 41606328
    1061552 9unv:C (3.12) BS05 P0E N/A GO:0005515 ... Q86UW1 41606328
    1061553 9unv:C (3.12) BS06 LPE N/A GO:0005515 ... Q86UW1 41606328
    1061554 9unv:C (3.12) BS07 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061555 9unv:C (3.12) BS08 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061556 9unv:C (3.12) BS09 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061557 9unv:C (3.12) BS10 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061558 9unv:C (3.12) BS11 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061559 9unv:C (3.12) BS12 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061560 9unv:C (3.12) BS13 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061561 9unv:C (3.12) BS14 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061562 9unv:C (3.12) BS15 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061563 9unv:C (3.12) BS16 A1EPX N/A GO:0005515 ... Q86UW1 41606328
    1061564 9unv:D (3.12) BS01 CLR N/A GO:0005515 ... Q86UW2 41606328
    1061565 9unv:D (3.12) BS02 CLR N/A GO:0005515 ... Q86UW2 41606328
    1061566 9unx:A (3.45) BS01 OLM N/A GO:0005452 ... Q4U2R8 40845848
    1061567 9uo1:A (2.9) BS01 76F N/A GO:0005515 ... Q86UW1 41606328
    1061568 9uo1:A (2.9) BS02 76F N/A GO:0005515 ... Q86UW1 41606328
    1061569 9uo1:A (2.9) BS03 P0E N/A GO:0005515 ... Q86UW1 41606328
    1061570 9uo1:A (2.9) BS04 LPE N/A GO:0005515 ... Q86UW1 41606328
    1061571 9uo1:A (2.9) BS05 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061572 9uo1:A (2.9) BS06 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061573 9uo1:A (2.9) BS07 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061574 9uo1:A (2.9) BS08 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061575 9uo1:A (2.9) BS09 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061576 9uo1:A (2.9) BS10 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061577 9uo1:A (2.9) BS11 ZWY N/A GO:0005515 ... Q86UW1 41606328
    1061578 9uo1:A (2.9) BS12 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061579 9uo1:A (2.9) BS13 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061580 9uo1:A (2.9) BS14 76F N/A GO:0005515 ... Q86UW1 41606328
    1061581 9uo1:A (2.9) BS15 76F N/A GO:0005515 ... Q86UW1 41606328
    1061582 9uo1:B (2.9) BS01 CLR N/A GO:0005515 ... Q86UW2 41606328
    1061583 9uo1:B (2.9) BS02 CLR N/A GO:0005515 ... Q86UW2 41606328
    1061584 9uo1:C (2.9) BS01 76F N/A GO:0005515 ... Q86UW1 41606328
    1061585 9uo1:C (2.9) BS02 76F N/A GO:0005515 ... Q86UW1 41606328
    1061586 9uo1:C (2.9) BS03 76F N/A GO:0005515 ... Q86UW1 41606328
    1061587 9uo1:C (2.9) BS04 76F N/A GO:0005515 ... Q86UW1 41606328
    1061588 9uo1:C (2.9) BS05 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061589 9uo1:C (2.9) BS06 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061590 9uo1:C (2.9) BS07 P0E N/A GO:0005515 ... Q86UW1 41606328
    1061591 9uo1:C (2.9) BS08 LPE N/A GO:0005515 ... Q86UW1 41606328
    1061592 9uo1:C (2.9) BS09 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061593 9uo1:C (2.9) BS10 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061594 9uo1:C (2.9) BS11 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061595 9uo1:C (2.9) BS12 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061596 9uo1:C (2.9) BS13 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061597 9uo1:C (2.9) BS14 CLR N/A GO:0005515 ... Q86UW1 41606328
    1061598 9uo1:D (2.9) BS01 CLR N/A GO:0005515 ... Q86UW2 41606328
    1061599 9uo2:A (2.6) BS01 76F N/A GO:0005515 ... Q86UW1 41606328
    1061600 9uo2:A (2.6) BS02 76F N/A GO:0005515 ... Q86UW1 41606328

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).