SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1061801 9uwh:4 (3.0) BS02 ZN N/A GO:0003735 ... Q9P0J6 41232526
    1061802 9uwh:5 (3.0) BS01 rna N/A GO:0003723 ... Q9BZE1 41232526
    1061803 9uwh:6 (3.0) BS01 rna N/A GO:0005515 ... Q96DV4 41232526
    1061804 9uwh:6 (3.0) BS02 rna N/A GO:0005515 ... Q96DV4 41232526
    1061805 9uwh:8 (3.0) BS01 rna N/A GO:0003723 ... Q9NQ50 41232526
    1061806 9uwh:8 (3.0) BS02 rna N/A GO:0003723 ... Q9NQ50 41232526
    1061807 9uwh:9 (3.0) BS01 rna N/A GO:0003723 ... Q8IXM3 41232526
    1061808 9uwh:A0 (3.0) BS01 rna N/A GO:0003735 ... P82930 41232526
    1061809 9uwh:A2 (3.0) BS01 rna N/A GO:0001650 ... Q96BP2 41232526
    1061810 9uwh:A3 (3.0) BS01 rna N/A GO:0005515 ... Q9NWT8 41232526
    1061811 9uwh:A3 (3.0) BS02 rna N/A GO:0005515 ... Q9NWT8 41232526
    1061812 9uwh:AB (3.0) BS01 rna N/A GO:0003735 ... Q9Y399 41232526
    1061813 9uwh:AB (3.0) BS02 MG N/A GO:0003735 ... Q9Y399 41232526
    1061814 9uwh:AC (3.0) BS01 rna N/A GO:0003723 ... Q96EL2 41232526
    1061815 9uwh:AD (3.0) BS01 rna N/A GO:0003723 ... P82675 41232526
    1061816 9uwh:AD (3.0) BS02 rna N/A GO:0003723 ... P82675 41232526
    1061817 9uwh:AE (3.0) BS01 rna N/A GO:0003735 ... P82932 41232526
    1061818 9uwh:AF (3.0) BS01 rna N/A GO:0003723 ... Q9Y2R9 41232526
    1061819 9uwh:AG (3.0) BS01 rna N/A GO:0003723 ... P82933 41232526
    1061820 9uwh:AH (3.0) BS01 rna N/A GO:0005739 ... P82664 41232526
    1061821 9uwh:AI (3.0) BS01 rna N/A GO:0003723 ... P82912 41232526
    1061822 9uwh:AJ (3.0) BS01 rna N/A GO:0003723 ... O15235 41232526
    1061823 9uwh:AK (3.0) BS01 rna N/A GO:0003723 ... O60783 41232526
    1061824 9uwh:AL (3.0) BS01 rna N/A GO:0003723 ... P82914 41232526
    1061825 9uwh:AM (3.0) BS01 rna N/A GO:0003735 ... Q9Y3D3 41232526
    1061826 9uwh:AN (3.0) BS01 rna N/A GO:0003735 ... Q9Y2R5 41232526
    1061827 9uwh:AO (3.0) BS01 rna N/A GO:0003735 ... Q9Y676 41232526
    1061828 9uwh:AO (3.0) BS02 ZN N/A GO:0003735 ... Q9Y676 41232526
    1061829 9uwh:AP (3.0) BS01 rna N/A GO:0003735 ... Q9Y3D5 41232526
    1061830 9uwh:AP (3.0) BS02 FES N/A GO:0003735 ... Q9Y3D5 41232526
    1061831 9uwh:AQ (3.0) BS01 rna N/A GO:0003735 ... A0A2J8VEN6 41232526
    1061832 9uwh:AS (3.0) BS01 rna N/A GO:0003723 ... Q9Y3D9 41232526
    1061833 9uwh:AT (3.0) BS01 rna N/A GO:0003735 ... P82663 41232526
    1061834 9uwh:AT (3.0) BS02 FES N/A GO:0003735 ... P82663 41232526
    1061835 9uwh:AU (3.0) BS01 rna N/A GO:0003723 ... Q9BYN8 41232526
    1061836 9uwh:AV (3.0) BS01 rna N/A GO:0000049 ... Q92552 41232526
    1061837 9uwh:AX (3.0) BS01 rna N/A GO:0003723 ... P51398 41232526
    1061838 9uwh:AX (3.0) BS02 ATP N/A GO:0003723 ... P51398 41232526
    1061839 9uwh:AX (3.0) BS03 GDP N/A GO:0003723 ... P51398 41232526
    1061840 9uwh:AZ (3.0) BS01 rna N/A GO:0003735 ... Q9Y291 41232526
    1061841 9uwh:D (3.0) BS01 rna N/A GO:0003723 ... Q5T653 41232526
    1061842 9uwh:E (3.0) BS01 rna N/A GO:0003723 ... P09001 41232526
    1061843 9uwh:F (3.0) BS01 rna N/A GO:0003723 ... Q9BYD3 41232526
    1061844 9uwh:H (3.0) BS01 rna N/A GO:0003723 ... Q9BYD2 41232526
    1061845 9uwh:I (3.0) BS01 rna N/A GO:0003723 ... Q7Z7H8 41232526
    1061846 9uwh:I (3.0) BS02 peptide N/A GO:0003723 ... Q7Z7H8 41232526
    1061847 9uwh:I (3.0) BS03 FES N/A GO:0003723 ... Q7Z7H8 41232526
    1061848 9uwh:J (3.0) BS01 rna N/A GO:0003723 ... Q9Y3B7 41232526
    1061849 9uwh:K (3.0) BS01 rna N/A GO:0003723 ... Q9BYD1 41232526
    1061850 9uwh:L (3.0) BS01 rna N/A GO:0003723 ... Q6P1L8 41232526
    1061851 9uwh:M (3.0) BS01 rna N/A GO:0003723 ... Q9P015 41232526
    1061852 9uwh:N (3.0) BS01 rna N/A GO:0003735 ... Q9NX20 41232526
    1061853 9uwh:O (3.0) BS01 rna N/A GO:0003735 ... Q9NRX2 41232526
    1061854 9uwh:P (3.0) BS01 rna N/A GO:0003735 ... Q9H0U6 41232526
    1061855 9uwh:P (3.0) BS02 rna N/A GO:0003735 ... Q9H0U6 41232526
    1061856 9uwh:Q (3.0) BS01 rna N/A GO:0003735 ... P49406 41232526
    1061857 9uwh:R (3.0) BS01 rna N/A GO:0003723 ... Q9BYC9 41232526
    1061858 9uwh:S (3.0) BS01 rna N/A GO:0003723 ... Q7Z2W9 41232526
    1061859 9uwh:T (3.0) BS01 rna N/A GO:0003723 ... Q9NWU5 41232526
    1061860 9uwh:U (3.0) BS01 rna N/A GO:0003723 ... Q16540 41232526
    1061861 9uwh:V (3.0) BS01 rna N/A GO:0003723 ... Q96A35 41232526
    1061862 9uwh:W (3.0) BS01 rna N/A GO:0003723 ... Q9P0M9 41232526
    1061863 9uwh:X (3.0) BS01 rna N/A GO:0003723 ... Q13084 41232526
    1061864 9uwh:Y (3.0) BS01 rna N/A GO:0003735 ... Q9HD33 41232526
    1061865 9uwh:Z (3.0) BS01 rna N/A GO:0003735 ... Q8TCC3 41232526
    1061866 9uwh:a (3.0) BS01 rna N/A GO:0003723 ... Q9Y6G3 41232526
    1061867 9uwh:b (3.0) BS01 rna N/A GO:0003723 ... Q8N983 41232526
    1061868 9uwh:c (3.0) BS01 rna N/A GO:0003723 ... Q9H9J2 41232526
    1061869 9uwh:d (3.0) BS01 rna N/A GO:0003723 ... Q9BRJ2 41232526
    1061870 9uwh:e (3.0) BS01 rna N/A GO:0003735 ... Q9H2W6 41232526
    1061871 9uwh:f (3.0) BS01 rna N/A GO:0005515 ... Q96GC5 41232526
    1061872 9uwh:f (3.0) BS02 rna N/A GO:0005515 ... Q96GC5 41232526
    1061873 9uwh:g (3.0) BS01 rna N/A GO:0003735 ... Q13405 41232526
    1061874 9uwh:i (3.0) BS01 rna N/A GO:0003735 ... Q4U2R6 41232526
    1061875 9uwh:j (3.0) BS01 rna N/A GO:0003735 ... Q86TS9 41232526
    1061876 9uwh:k (3.0) BS01 rna N/A GO:0005515 ... Q96EL3 41232526
    1061877 9uwh:k (3.0) BS02 peptide N/A GO:0005515 ... Q96EL3 41232526
    1061878 9uwh:l (3.0) BS01 rna N/A GO:0003723 ... Q6P161 41232526
    1061879 9uwh:o (3.0) BS01 rna N/A GO:0003735 ... Q9BQC6 41232526
    1061880 9uwh:q (3.0) BS01 rna N/A GO:0003735 ... Q8TAE8 41232526
    1061881 9uwh:r (3.0) BS01 rna N/A GO:0003735 ... Q9NVS2 41232526
    1061882 9uwh:r (3.0) BS02 FES N/A GO:0003735 ... Q9NVS2 41232526
    1061883 9uwh:s (3.0) BS01 rna N/A GO:0003723 ... Q9NP92 41232526
    1061884 9uwi:A (2.8) BS01 peptide N/A GO:0001992 ... P37288 41545407
    1061885 9uwi:A (2.8) BS02 CLR N/A GO:0001992 ... P37288 41545407
    1061886 9uwi:A (2.8) BS03 CLR N/A GO:0001992 ... P37288 41545407
    1061887 9uwi:B (2.8) BS01 peptide N/A GO:0001992 ... P37288 41545407
    1061888 9uwi:B (2.8) BS02 CLR N/A GO:0001992 ... P37288 41545407
    1061889 9uwi:B (2.8) BS03 CLR N/A GO:0001992 ... P37288 41545407
    1061890 9uwj:A (3.0) BS01 A1EB7 N/A GO:0001992 ... P37288 41545407
    1061891 9uwj:A (3.0) BS02 CLR N/A GO:0001992 ... P37288 41545407
    1061892 9uwj:B (3.0) BS01 A1EB7 N/A GO:0001992 ... P37288 41545407
    1061893 9uwj:B (3.0) BS02 CLR N/A GO:0001992 ... P37288 41545407
    1061894 9uwl:A (2.6) BS01 A1EQN N/A GO:0001992 ... P37288 41545407
    1061895 9uwl:A (2.6) BS02 CLR N/A GO:0001992 ... P37288 41545407
    1061896 9uwl:A (2.6) BS03 CLR N/A GO:0001992 ... P37288 41545407
    1061897 9uwl:B (2.6) BS01 A1EQN N/A GO:0001992 ... P37288 41545407
    1061898 9uwl:B (2.6) BS02 CLR N/A GO:0001992 ... P37288 41545407
    1061899 9uwl:B (2.6) BS03 CLR N/A GO:0001992 ... P37288 41545407
    1061900 9uwn:A (1.57) BS01 GLC N/A GO:0002667 ... Q05315 N/A
    1061901 9uwn:A (1.57) BS02 GLA N/A GO:0002667 ... Q05315 N/A
    1061902 9uwo:A (1.64) BS01 GLC N/A GO:0002667 ... Q05315 N/A
    1061903 9uwp:A (1.57) BS01 GLC N/A GO:0002667 ... Q05315 N/A
    1061904 9uws:A (1.78) BS01 GLC N/A GO:0002667 ... Q05315 N/A
    1061905 9uwt:A (2.31) BS01 GLC N/A GO:0002667 ... Q05315 N/A
    1061906 9uwu:A (1.99) BS01 GLC N/A GO:0002667 ... Q05315 N/A
    1061907 9uwu:A (1.99) BS02 GLC N/A GO:0002667 ... Q05315 N/A
    1061908 9uwx:A (2.41) BS01 ATP N/A N/A Q9UBL9 N/A
    1061909 9uwx:A (2.41) BS02 ATP N/A N/A Q9UBL9 N/A
    1061910 9uwx:B (2.41) BS01 ATP N/A N/A Q9UBL9 N/A
    1061911 9uwx:B (2.41) BS02 ATP N/A N/A Q9UBL9 N/A
    1061912 9uwx:C (2.41) BS01 ATP N/A N/A Q9UBL9 N/A
    1061913 9uwx:C (2.41) BS02 ATP N/A N/A Q9UBL9 N/A
    1061914 9uwy:A (2.48) BS01 ATP N/A N/A Q9UBL9 N/A
    1061915 9uwy:B (2.48) BS01 ATP N/A N/A Q9UBL9 N/A
    1061916 9uwy:C (2.48) BS01 ATP N/A N/A Q9UBL9 N/A
    1061917 9uwz:B (2.2) BS01 TBR N/A GO:0030254 ... Q87P37 40517674
    1061918 9ux1:B (2.98) BS01 ATP N/A N/A P56373 N/A
    1061919 9ux1:C (2.98) BS01 ATP N/A N/A Q9UBL9 N/A
    1061920 9ux2:A (2.73) BS01 ATP N/A N/A P56373 N/A
    1061921 9ux2:A (2.73) BS02 ATP N/A N/A P56373 N/A
    1061922 9ux2:B (2.73) BS01 ATP N/A N/A Q9UBL9 N/A
    1061923 9ux2:C (2.73) BS01 ATP N/A N/A Q9UBL9 N/A
    1061924 9ux3:A (2.64) BS01 ATP N/A N/A P56373 N/A
    1061925 9ux3:A (2.64) BS02 ATP N/A N/A P56373 N/A
    1061926 9ux3:A (2.64) BS03 AF9 N/A N/A P56373 N/A
    1061927 9ux3:B (2.64) BS01 ATP N/A N/A Q9UBL9 N/A
    1061928 9ux3:C (2.64) BS01 ATP N/A N/A Q9UBL9 N/A
    1061929 9ux3:C (2.64) BS02 AF9 N/A N/A Q9UBL9 N/A
    1061930 9ux4:A (2.57) BS01 A1AQX N/A N/A P56373 N/A
    1061931 9ux4:A (2.57) BS02 A1AQX N/A N/A P56373 N/A
    1061932 9ux4:B (2.57) BS01 A1AQX N/A N/A P56373 N/A
    1061933 9ux4:B (2.57) BS02 A1AQX N/A N/A P56373 N/A
    1061934 9ux4:C (2.57) BS01 A1AQX N/A N/A P56373 N/A
    1061935 9ux4:C (2.57) BS02 A1AQX N/A N/A P56373 N/A
    1061936 9ux7:B (3.73) BS01 dna N/A N/A N/A 41482579
    1061937 9ux7:C (3.73) BS01 dna N/A N/A N/A 41482579
    1061938 9ux7:C (3.73) BS02 dna N/A N/A N/A 41482579
    1061939 9ux9:A (3.05) BS01 dna N/A N/A A0A310TTQ1 41657245
    1061940 9ux9:A (3.05) BS02 dna N/A N/A A0A310TTQ1 41657245
    1061941 9ux9:B (3.05) BS01 dna N/A N/A P62799 41657245
    1061942 9ux9:B (3.05) BS02 dna N/A N/A P62799 41657245
    1061943 9ux9:C (3.05) BS01 dna N/A N/A Q6AZJ8 41657245
    1061944 9ux9:C (3.05) BS02 dna N/A N/A Q6AZJ8 41657245
    1061945 9ux9:D (3.05) BS01 dna N/A N/A A0A8J0U496 41657245
    1061946 9ux9:E (3.05) BS01 dna N/A N/A A0A310TTQ1 41657245
    1061947 9ux9:E (3.05) BS02 dna N/A N/A A0A310TTQ1 41657245
    1061948 9ux9:F (3.05) BS01 dna N/A N/A P62799 41657245
    1061949 9ux9:G (3.05) BS01 dna N/A N/A Q6AZJ8 41657245
    1061950 9ux9:G (3.05) BS02 dna N/A N/A Q6AZJ8 41657245
    1061951 9ux9:H (3.05) BS01 dna N/A N/A A0A8J0U496 41657245
    1061952 9ux9:H (3.05) BS02 dna N/A N/A A0A8J0U496 41657245
    1061953 9ux9:K (3.05) BS01 dna N/A N/A P51532 41657245
    1061954 9ux9:K (3.05) BS02 dna N/A N/A P51532 41657245
    1061955 9ux9:K (3.05) BS03 BEF N/A N/A P51532 41657245
    1061956 9ux9:K (3.05) BS04 MG N/A N/A P51532 41657245
    1061957 9ux9:K (3.05) BS05 ADP N/A N/A P51532 41657245
    1061958 9uxg:A (1.7) BS01 peptide N/A GO:0000122 ... P61964 41621782
    1061959 9uxh:D (3.03) BS01 dna N/A N/A N/A 41482579
    1061960 9uxh:D (3.03) BS02 dna N/A N/A N/A 41482579
    1061961 9uxh:F (3.03) BS01 dna N/A N/A N/A 41482579
    1061962 9uxh:F (3.03) BS02 dna N/A N/A N/A 41482579
    1061963 9uxj:A (1.76) BS01 peptide N/A GO:0000122 ... P61964 41621782
    1061964 9uxm:A (1.48) BS01 peptide N/A GO:0000122 ... P61964 41621782
    1061965 9uy3:R (2.52) BS01 CLR N/A GO:0001616 ... Q92847 40542284
    1061966 9uy3:R (2.52) BS02 CLR N/A GO:0001616 ... Q92847 40542284
    1061967 9uy3:R (2.52) BS03 A1ESD N/A GO:0001616 ... Q92847 40542284
    1061968 9uyc:A (1.53) BS01 TRP N/A N/A C9ZDC6 N/A
    1061969 9uyc:A (1.53) BS02 HEM N/A N/A C9ZDC6 N/A
    1061970 9uyc:C (1.53) BS01 TRP N/A N/A C9ZDC6 N/A
    1061971 9uyc:C (1.53) BS02 HEM N/A N/A C9ZDC6 N/A
    1061972 9uyh:R (3.3) BS01 peptide N/A GO:0004930 ... P30518
    P46091
    41264711
    1061973 9uyi:R (3.2) BS01 peptide N/A GO:0004930 ... P30518
    P46091
    41264711
    1061974 9uyj:R (3.3) BS01 peptide N/A GO:0004930 ... P30518
    P46091
    41264711
    1061975 9uyl:R (3.3) BS01 peptide N/A GO:0004930 ... P30518
    P46091
    41264711
    1061976 9uym:A (3.5) BS01 Y01 N/A N/A P32121
    P49407
    41264711
    1061977 9uym:R (3.5) BS01 Y01 N/A GO:0004930 ... P30518
    P46091
    41264711
    1061978 9uyo:A (3.39) BS01 SEP N/A N/A N/A N/A
    1061979 9uyo:B (3.39) BS01 SEP N/A N/A N/A N/A
    1061980 9uyp:A (3.51) BS01 SEP N/A N/A N/A N/A
    1061981 9uyp:B (3.51) BS01 SEP N/A N/A N/A N/A
    1061982 9uyq:A (3.27) BS01 SEP N/A N/A N/A N/A
    1061983 9uyq:B (3.27) BS01 SEP N/A N/A N/A N/A
    1061984 9uzc:A (1.98) BS01 MN N/A N/A A0A0M5KLS1 N/A
    1061985 9uzc:A (1.98) BS02 MN N/A N/A A0A0M5KLS1 N/A
    1061986 9uzd:A (2.4) BS01 MN N/A N/A A0A0M5KLS1 N/A
    1061987 9uze:A (2.41) BS01 MN N/A N/A A0A0M5KLS1 N/A
    1061988 9uzg:A (2.15) BS01 MN N/A N/A A0A0M5KLS1 N/A
    1061989 9uzh:A (1.95) BS01 MN N/A N/A A0A0M5KLS1 N/A
    1061990 9uzh:A (1.95) BS02 0N8 N/A N/A A0A0M5KLS1 N/A
    1061991 9uzi:A (2.16) BS01 MN N/A N/A A0A0M5KLS1 N/A
    1061992 9uzi:A (2.16) BS02 MN N/A N/A A0A0M5KLS1 N/A
    1061993 9uzi:A (2.16) BS03 E4Z N/A N/A A0A0M5KLS1 N/A
    1061994 9uzt:B (2.17) BS01 A1EQR N/A N/A P17706 41204903
    1061995 9v0k:A (1.54) BS01 ZN N/A GO:0008270 ... Q8IWV7 N/A
    1061996 9v0k:A (1.54) BS02 ZN N/A GO:0008270 ... Q8IWV7 N/A
    1061997 9v0k:A (1.54) BS03 ZN N/A GO:0008270 ... Q8IWV7 N/A
    1061998 9v0k:B (1.54) BS01 ZN N/A GO:0008270 ... Q8IWV7 N/A
    1061999 9v0k:B (1.54) BS02 ZN N/A GO:0008270 ... Q8IWV7 N/A
    1062000 9v0k:B (1.54) BS03 ZN N/A GO:0008270 ... Q8IWV7 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).