SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1062001 9v0l:A (2.3) BS01 UDP N/A GO:0016757 ... A0ABX1LL65 41231237
    1062002 9v0x:R (2.66) BS01 peptide N/A GO:0004930 ... P49683 41639321
    1062003 9v0x:R (2.66) BS02 KUT N/A GO:0004930 ... P49683 41639321
    1062004 9v0y:C (2.64) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062005 9v0y:F (2.64) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062006 9v0y:I (2.64) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062007 9v0y:L (2.64) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062008 9v0y:a (2.64) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062009 9v0y:d (2.64) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062010 9v0y:g (2.64) BS01 NCA N/A N/A A0AAC8TGL7 41638213
    1062011 9v0y:h (2.64) BS01 NCA N/A N/A A0AAC8TGL7 41638213
    1062012 9v0y:i (2.64) BS01 NCA N/A N/A A0AAC8TGL7 41638213
    1062013 9v0y:j (2.64) BS01 NCA N/A N/A A0AAC8TGL7 41638213
    1062014 9v0y:o (2.64) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062015 9v0y:r (2.64) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062016 9v0y:s (2.64) BS01 NCA N/A N/A A0AAC8TGL7 41638213
    1062017 9v0y:t (2.64) BS01 NCA N/A N/A A0AAC8TGL7 41638213
    1062018 9v0y:u (2.64) BS01 NCA N/A N/A A0AAC8TGL7 41638213
    1062019 9v0y:v (2.64) BS01 NCA N/A N/A A0AAC8TGL7 41638213
    1062020 9v12:I (2.57) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062021 9v12:K (2.57) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062022 9v12:M (2.57) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062023 9v12:O (2.57) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062024 9v12:R (2.57) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062025 9v12:T (2.57) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062026 9v12:V (2.57) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062027 9v12:X (2.57) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062028 9v12:i (2.57) BS01 NAD N/A N/A A0AAC8TGL7 41638213
    1062029 9v12:j (2.57) BS01 NAD N/A N/A A0AAC8TGL7 41638213
    1062030 9v12:k (2.57) BS01 NAD N/A N/A A0AAC8TGL7 41638213
    1062031 9v12:l (2.57) BS01 NAD N/A N/A A0AAC8TGL7 41638213
    1062032 9v12:m (2.57) BS01 NAD N/A N/A A0AAC8TGL7 41638213
    1062033 9v12:n (2.57) BS01 NAD N/A N/A A0AAC8TGL7 41638213
    1062034 9v12:o (2.57) BS01 NAD N/A N/A A0AAC8TGL7 41638213
    1062035 9v12:p (2.57) BS01 NAD N/A N/A A0AAC8TGL7 41638213
    1062036 9v14:A (0.93) BS01 42B N/A GO:0019120 ... B2Z3V8 N/A
    1062037 9v16:A (3.45) BS01 AMP N/A N/A N/A N/A
    1062038 9v16:B (3.45) BS01 AMP N/A N/A N/A N/A
    1062039 9v16:C (3.45) BS01 AMP N/A N/A N/A N/A
    1062040 9v16:D (3.45) BS01 AMP N/A N/A N/A N/A
    1062041 9v1h:R (2.85) BS01 peptide N/A N/A Q9Y5X5 41639321
    1062042 9v1i:lD (2.8) BS01 rna N/A GO:0002181 ... O15574 40835601
    1062043 9v1i:lE (2.8) BS01 rna N/A GO:0003723 ... C4LW09 40835601
    1062044 9v1i:lF (2.8) BS01 rna N/A GO:0003723 ... B1N384 40835601
    1062045 9v1i:lF (2.8) BS02 rna N/A GO:0003723 ... B1N384 40835601
    1062046 9v1i:lG (2.8) BS01 rna N/A GO:0000027 ... C4LU56 40835601
    1062047 9v1i:lG (2.8) BS02 rna N/A GO:0000027 ... C4LU56 40835601
    1062048 9v1i:lH (2.8) BS01 rna N/A GO:0002181 ... C4LYF9 40835601
    1062049 9v1i:lI (2.8) BS01 rna N/A GO:0000463 ... C4M751 40835601
    1062050 9v1i:lI (2.8) BS02 rna N/A GO:0000463 ... C4M751 40835601
    1062051 9v1i:lJ (2.8) BS01 rna N/A GO:0000470 ... C4LVH6 40835601
    1062052 9v1i:lJ (2.8) BS02 rna N/A GO:0000470 ... C4LVH6 40835601
    1062053 9v1i:lK (2.8) BS01 rna N/A GO:0002181 ... C4LVZ9 40835601
    1062054 9v1i:lL (2.8) BS01 rna N/A GO:0003735 ... C4LTA0 40835601
    1062055 9v1i:lL (2.8) BS02 rna N/A GO:0003735 ... C4LTA0 40835601
    1062056 9v1i:lM (2.8) BS01 rna N/A GO:0003723 ... C4LZG9 40835601
    1062057 9v1i:lM (2.8) BS02 rna N/A GO:0003723 ... C4LZG9 40835601
    1062058 9v1i:lN (2.8) BS01 rna N/A GO:0003723 ... C4M8R8 40835601
    1062059 9v1i:lN (2.8) BS02 rna N/A GO:0003723 ... C4M8R8 40835601
    1062060 9v1i:lO (2.8) BS01 rna N/A GO:0003729 ... C4M3F3 40835601
    1062061 9v1i:lP (2.8) BS01 rna N/A GO:0003723 ... C4M8C9 40835601
    1062062 9v1i:lQ (2.8) BS01 rna N/A GO:0002181 ... C4M7U2 40835601
    1062063 9v1i:lQ (2.8) BS02 rna N/A GO:0002181 ... C4M7U2 40835601
    1062064 9v1i:lR (2.8) BS01 rna N/A GO:0002181 ... C4LX05 40835601
    1062065 9v1i:lR (2.8) BS02 rna N/A GO:0002181 ... C4LX05 40835601
    1062066 9v1i:lS (2.8) BS01 rna N/A GO:0002181 ... C4LXC8 40835601
    1062067 9v1i:lT (2.8) BS01 rna N/A GO:0002181 ... C4LXZ0 40835601
    1062068 9v1i:lT (2.8) BS02 rna N/A GO:0002181 ... C4LXZ0 40835601
    1062069 9v1i:lU (2.8) BS01 rna N/A GO:0003723 ... C4LWJ4 40835601
    1062070 9v1i:lV (2.8) BS01 rna N/A GO:0003735 ... C4LV69 40835601
    1062071 9v1i:lV (2.8) BS02 rna N/A GO:0003735 ... C4LV69 40835601
    1062072 9v1i:lW (2.8) BS01 rna N/A GO:0002181 ... C4LW40 40835601
    1062073 9v1i:lX (2.8) BS01 rna N/A GO:0003735 ... C4LVB0 40835601
    1062074 9v1i:lY (2.8) BS01 rna N/A GO:0003735 ... C4LV64 40835601
    1062075 9v1i:lY (2.8) BS02 rna N/A GO:0003735 ... C4LV64 40835601
    1062076 9v1i:lZ (2.8) BS01 rna N/A GO:0002181 ... C4LSA0 40835601
    1062077 9v1i:la (2.8) BS01 rna N/A GO:0002181 ... C4LSU3 40835601
    1062078 9v1i:la (2.8) BS02 rna N/A GO:0002181 ... C4LSU3 40835601
    1062079 9v1i:lb (2.8) BS01 rna N/A GO:0003735 ... C4M727 40835601
    1062080 9v1i:lc (2.8) BS01 rna N/A GO:0003735 ... Q9BI06 40835601
    1062081 9v1i:ld (2.8) BS01 rna N/A GO:0002181 ... C4LUN3 40835601
    1062082 9v1i:le (2.8) BS01 rna N/A GO:0003723 ... C4M919 40835601
    1062083 9v1i:lf (2.8) BS01 rna N/A GO:0002181 ... C4LU13 40835601
    1062084 9v1i:lg (2.8) BS01 rna N/A GO:0003735 ... C4LT96 40835601
    1062085 9v1i:lh (2.8) BS01 rna N/A GO:0003735 ... C4LYA7 40835601
    1062086 9v1i:li (2.8) BS01 rna N/A GO:0000463 ... N/A 40835601
    1062087 9v1i:li (2.8) BS02 rna N/A GO:0000463 ... N/A 40835601
    1062088 9v1i:lj (2.8) BS01 rna N/A GO:0002181 ... B1N4V3 40835601
    1062089 9v1i:lj (2.8) BS02 peptide N/A GO:0002181 ... B1N4V3 40835601
    1062090 9v1i:lk (2.8) BS01 rna N/A GO:0002181 ... C4LZH1 40835601
    1062091 9v1i:ll (2.8) BS01 rna N/A GO:0000448 ... C4M0X0 40835601
    1062092 9v1i:ll (2.8) BS02 rna N/A GO:0000448 ... C4M0X0 40835601
    1062093 9v1i:lm (2.8) BS01 rna N/A GO:0003735 ... N9UZL4 40835601
    1062094 9v1i:ln (2.8) BS01 rna N/A GO:0002181 ... C4M6F9 40835601
    1062095 9v1i:lo (2.8) BS01 rna N/A GO:0002181 ... C4LTA2 40835601
    1062096 9v1i:lo (2.8) BS02 rna N/A GO:0002181 ... C4LTA2 40835601
    1062097 9v1i:lp (2.8) BS01 rna N/A GO:0003735 ... C4LV09 40835601
    1062098 9v1i:lq (2.8) BS01 rna N/A GO:0002181 ... C4LS99 40835601
    1062099 9v1j:sB (3.1) BS01 rna N/A GO:0003729 ... C4M7G9 40835601
    1062100 9v1j:sC (3.1) BS01 rna N/A GO:0003735 ... P38654 40835601
    1062101 9v1j:sb (3.1) BS01 rna N/A GO:0000028 ... C4M5A0 40835601
    1062102 9v1j:sc (3.1) BS01 rna N/A GO:0003723 ... C4M7U0 40835601
    1062103 9v1j:se (3.1) BS01 rna N/A GO:0003735 ... C4M609 40835601
    1062104 9v1j:sf (3.1) BS01 rna N/A GO:0003723 ... C4LYF4 40835601
    1062105 9v1j:sh (3.1) BS01 rna N/A GO:0003735 ... C4LXN2 40835601
    1062106 9v1j:si (3.1) BS01 rna N/A GO:0003735 ... C4M9F9 40835601
    1062107 9v1j:sj (3.1) BS01 rna N/A GO:0002181 ... C4M8Y8 40835601
    1062108 9v1j:sk (3.1) BS01 rna N/A GO:0003723 ... O15612 40835601
    1062109 9v1j:sm (3.1) BS01 rna N/A GO:0003735 ... C4M979 40835601
    1062110 9v1j:so (3.1) BS01 rna N/A GO:0000462 ... A0A175JJM9 40835601
    1062111 9v1j:sp (3.1) BS01 rna N/A GO:0000028 ... B1N2I3 40835601
    1062112 9v1j:sr (3.1) BS01 rna N/A GO:0003735 ... C4LXM0 40835601
    1062113 9v1j:sy (3.1) BS01 rna N/A GO:0003735 ... C4M5B7 40835601
    1062114 9v1j:sz (3.1) BS01 rna N/A GO:0002181 ... C4M549 40835601
    1062115 9v1k:sA (3.4) BS01 rna N/A GO:0003735 ... C4M9F4 40835601
    1062116 9v1k:sD (3.4) BS01 rna N/A GO:0000028 ... C4LZQ8 40835601
    1062117 9v1k:sE (3.4) BS01 rna N/A GO:0002181 ... C4LW10 40835601
    1062118 9v1k:sG (3.4) BS01 rna N/A GO:0005080 ... C4LTS8 40835601
    1062119 9v1k:sd (3.4) BS01 rna N/A GO:0003723 ... C4LT02 40835601
    1062120 9v1k:sg (3.4) BS01 rna N/A GO:0003723 ... O15587 40835601
    1062121 9v1k:sl (3.4) BS01 rna N/A GO:0000822 ... C4LVC0 40835601
    1062122 9v1k:sq (3.4) BS01 rna N/A GO:0003723 ... C4M7H3 40835601
    1062123 9v1k:ss (3.4) BS01 rna N/A GO:0000462 ... C4M2R7 40835601
    1062124 9v1k:st (3.4) BS01 rna N/A GO:0003735 ... C4M0Z2 40835601
    1062125 9v1k:su (3.4) BS01 rna N/A GO:0003676 ... P48151 40835601
    1062126 9v1k:sv (3.4) BS01 rna N/A GO:0003735 ... O15631 40835601
    1062127 9v1k:sw (3.4) BS01 rna N/A GO:0003735 ... C4M5V7 40835601
    1062128 9v1l:lD (3.0) BS01 rna N/A GO:0002181 ... O15574 40835601
    1062129 9v1l:lE (3.0) BS01 rna N/A GO:0003723 ... C4LW09 40835601
    1062130 9v1l:lF (3.0) BS01 rna N/A GO:0003723 ... B1N384 40835601
    1062131 9v1l:lF (3.0) BS02 rna N/A GO:0003723 ... B1N384 40835601
    1062132 9v1l:lG (3.0) BS01 rna N/A GO:0000027 ... C4LU56 40835601
    1062133 9v1l:lG (3.0) BS02 rna N/A GO:0000027 ... C4LU56 40835601
    1062134 9v1l:lH (3.0) BS01 rna N/A GO:0002181 ... C4LYF9 40835601
    1062135 9v1l:lI (3.0) BS01 rna N/A GO:0000463 ... C4M751 40835601
    1062136 9v1l:lI (3.0) BS02 rna N/A GO:0000463 ... C4M751 40835601
    1062137 9v1l:lJ (3.0) BS01 rna N/A GO:0003723 ... C4LVH6 40835601
    1062138 9v1l:lJ (3.0) BS02 rna N/A GO:0003723 ... C4LVH6 40835601
    1062139 9v1l:lK (3.0) BS01 rna N/A GO:0002181 ... C4LVZ9 40835601
    1062140 9v1l:lL (3.0) BS01 rna N/A GO:0003735 ... C4LTA0 40835601
    1062141 9v1l:lL (3.0) BS02 rna N/A GO:0003735 ... C4LTA0 40835601
    1062142 9v1l:lM (3.0) BS01 rna N/A GO:0003723 ... C4LZG9 40835601
    1062143 9v1l:lM (3.0) BS02 rna N/A GO:0003723 ... C4LZG9 40835601
    1062144 9v1l:lN (3.0) BS01 rna N/A GO:0003723 ... C4M8R8 40835601
    1062145 9v1l:lN (3.0) BS02 rna N/A GO:0003723 ... C4M8R8 40835601
    1062146 9v1l:lO (3.0) BS01 rna N/A GO:0003729 ... C4M3F3 40835601
    1062147 9v1l:lP (3.0) BS01 rna N/A GO:0003723 ... C4M8C9 40835601
    1062148 9v1l:lQ (3.0) BS01 rna N/A GO:0002181 ... C4M7U2 40835601
    1062149 9v1l:lQ (3.0) BS02 rna N/A GO:0002181 ... C4M7U2 40835601
    1062150 9v1l:lR (3.0) BS01 rna N/A GO:0002181 ... C4LX05 40835601
    1062151 9v1l:lR (3.0) BS02 rna N/A GO:0002181 ... C4LX05 40835601
    1062152 9v1l:lS (3.0) BS01 rna N/A GO:0002181 ... C4LXC8 40835601
    1062153 9v1l:lT (3.0) BS01 rna N/A GO:0002181 ... C4LXZ0 40835601
    1062154 9v1l:lT (3.0) BS02 rna N/A GO:0002181 ... C4LXZ0 40835601
    1062155 9v1l:lU (3.0) BS01 rna N/A GO:0003723 ... C4LWJ4 40835601
    1062156 9v1l:lV (3.0) BS01 rna N/A GO:0003735 ... C4LV69 40835601
    1062157 9v1l:lV (3.0) BS02 rna N/A GO:0003735 ... C4LV69 40835601
    1062158 9v1l:lW (3.0) BS01 rna N/A GO:0002181 ... C4LW40 40835601
    1062159 9v1l:lX (3.0) BS01 rna N/A GO:0003735 ... C4LVB0 40835601
    1062160 9v1l:lY (3.0) BS01 rna N/A GO:0003735 ... C4LV64 40835601
    1062161 9v1l:lY (3.0) BS02 rna N/A GO:0003735 ... C4LV64 40835601
    1062162 9v1l:lZ (3.0) BS01 rna N/A GO:0002181 ... C4LSA0 40835601
    1062163 9v1l:la (3.0) BS01 rna N/A GO:0002181 ... C4LSU3 40835601
    1062164 9v1l:la (3.0) BS02 rna N/A GO:0002181 ... C4LSU3 40835601
    1062165 9v1l:lb (3.0) BS01 rna N/A GO:0003735 ... C4M727 40835601
    1062166 9v1l:lc (3.0) BS01 rna N/A GO:0003735 ... Q9BI06 40835601
    1062167 9v1l:ld (3.0) BS01 rna N/A GO:0002181 ... C4LUN3 40835601
    1062168 9v1l:le (3.0) BS01 rna N/A GO:0003723 ... C4M919 40835601
    1062169 9v1l:lf (3.0) BS01 rna N/A GO:0002181 ... C4LU13 40835601
    1062170 9v1l:lg (3.0) BS01 rna N/A GO:0003735 ... C4LT96 40835601
    1062171 9v1l:lh (3.0) BS01 rna N/A GO:0003735 ... C4LYA7 40835601
    1062172 9v1l:li (3.0) BS01 rna N/A GO:0000463 ... N/A 40835601
    1062173 9v1l:li (3.0) BS02 rna N/A GO:0000463 ... N/A 40835601
    1062174 9v1l:lj (3.0) BS01 rna N/A GO:0002181 ... B1N4V3 40835601
    1062175 9v1l:lk (3.0) BS01 rna N/A GO:0002181 ... C4LZH1 40835601
    1062176 9v1l:ll (3.0) BS01 rna N/A GO:0000448 ... C4M0X0 40835601
    1062177 9v1l:ll (3.0) BS02 rna N/A GO:0000448 ... C4M0X0 40835601
    1062178 9v1l:lm (3.0) BS01 rna N/A GO:0003735 ... N9UZL4 40835601
    1062179 9v1l:ln (3.0) BS01 rna N/A GO:0002181 ... C4M6F9 40835601
    1062180 9v1l:lo (3.0) BS01 rna N/A GO:0002181 ... C4LTA2 40835601
    1062181 9v1l:lo (3.0) BS02 rna N/A GO:0002181 ... C4LTA2 40835601
    1062182 9v1l:lp (3.0) BS01 rna N/A GO:0003735 ... C4LV09 40835601
    1062183 9v1l:lq (3.0) BS01 rna N/A GO:0002181 ... C4LS99 40835601
    1062184 9v21:lD (3.0) BS01 rna N/A GO:0002181 ... O15574 40835601
    1062185 9v21:lE (3.0) BS01 rna N/A GO:0003723 ... C4LW09 40835601
    1062186 9v21:lF (3.0) BS01 rna N/A GO:0003723 ... B1N384 40835601
    1062187 9v21:lF (3.0) BS02 rna N/A GO:0003723 ... B1N384 40835601
    1062188 9v21:lG (3.0) BS01 rna N/A GO:0000027 ... C4LU56 40835601
    1062189 9v21:lG (3.0) BS02 rna N/A GO:0000027 ... C4LU56 40835601
    1062190 9v21:lH (3.0) BS01 rna N/A GO:0002181 ... O15595 40835601
    1062191 9v21:lI (3.0) BS01 rna N/A GO:0000463 ... C4M751 40835601
    1062192 9v21:lI (3.0) BS02 rna N/A GO:0000463 ... C4M751 40835601
    1062193 9v21:lJ (3.0) BS01 rna N/A GO:0000470 ... C4LVH6 40835601
    1062194 9v21:lJ (3.0) BS02 rna N/A GO:0000470 ... C4LVH6 40835601
    1062195 9v21:lK (3.0) BS01 rna N/A GO:0002181 ... C4LVZ9 40835601
    1062196 9v21:lL (3.0) BS01 rna N/A GO:0003735 ... C4LTA0 40835601
    1062197 9v21:lL (3.0) BS02 rna N/A GO:0003735 ... C4LTA0 40835601
    1062198 9v21:lL (3.0) BS03 rna N/A GO:0003735 ... C4LTA0 40835601
    1062199 9v21:lM (3.0) BS01 rna N/A GO:0003723 ... C4LZG9 40835601
    1062200 9v21:lM (3.0) BS02 rna N/A GO:0003723 ... C4LZG9 40835601

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).