SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1062201 9v21:lM (3.0) BS03 rna N/A GO:0003723 ... C4LZG9 40835601
    1062202 9v21:lN (3.0) BS01 rna N/A GO:0003723 ... C4M8R8 40835601
    1062203 9v21:lN (3.0) BS02 rna N/A GO:0003723 ... C4M8R8 40835601
    1062204 9v21:lO (3.0) BS01 rna N/A GO:0003729 ... C4M3F3 40835601
    1062205 9v21:lP (3.0) BS01 rna N/A GO:0003723 ... C4M6S2 40835601
    1062206 9v21:lQ (3.0) BS01 rna N/A GO:0002181 ... C4M7U2 40835601
    1062207 9v21:lQ (3.0) BS02 rna N/A GO:0002181 ... C4M7U2 40835601
    1062208 9v21:lR (3.0) BS01 rna N/A GO:0002181 ... C4LX05 40835601
    1062209 9v21:lR (3.0) BS02 rna N/A GO:0002181 ... C4LX05 40835601
    1062210 9v21:lS (3.0) BS01 rna N/A GO:0002181 ... C4LXC8 40835601
    1062211 9v21:lT (3.0) BS01 rna N/A GO:0002181 ... C4LXZ0 40835601
    1062212 9v21:lT (3.0) BS02 rna N/A GO:0002181 ... C4LXZ0 40835601
    1062213 9v21:lU (3.0) BS01 rna N/A GO:0003723 ... C4LWJ4 40835601
    1062214 9v21:lV (3.0) BS01 rna N/A GO:0003735 ... C4LV69 40835601
    1062215 9v21:lV (3.0) BS02 rna N/A GO:0003735 ... C4LV69 40835601
    1062216 9v21:lW (3.0) BS01 rna N/A GO:0002181 ... C4LW40 40835601
    1062217 9v21:lX (3.0) BS01 rna N/A GO:0003735 ... C4LVB0 40835601
    1062218 9v21:lY (3.0) BS01 rna N/A GO:0003735 ... C4LV64 40835601
    1062219 9v21:lY (3.0) BS02 rna N/A GO:0003735 ... C4LV64 40835601
    1062220 9v21:lZ (3.0) BS01 rna N/A GO:0002181 ... C4LSA0 40835601
    1062221 9v21:la (3.0) BS01 rna N/A GO:0002181 ... C4LSU3 40835601
    1062222 9v21:la (3.0) BS02 rna N/A GO:0002181 ... C4LSU3 40835601
    1062223 9v21:lb (3.0) BS01 rna N/A GO:0003735 ... C4M727 40835601
    1062224 9v21:lc (3.0) BS01 rna N/A GO:0003735 ... Q9BI06 40835601
    1062225 9v21:ld (3.0) BS01 rna N/A GO:0002181 ... C4LUN3 40835601
    1062226 9v21:le (3.0) BS01 rna N/A GO:0003723 ... C4M919 40835601
    1062227 9v21:lf (3.0) BS01 rna N/A GO:0002181 ... C4LU13 40835601
    1062228 9v21:lg (3.0) BS01 rna N/A GO:0003735 ... C4LT96 40835601
    1062229 9v21:lh (3.0) BS01 rna N/A GO:0003735 ... C4LYA7 40835601
    1062230 9v21:li (3.0) BS01 rna N/A GO:0000463 ... N/A 40835601
    1062231 9v21:li (3.0) BS02 rna N/A GO:0000463 ... N/A 40835601
    1062232 9v21:lj (3.0) BS01 rna N/A GO:0002181 ... B1N4V3 40835601
    1062233 9v21:lk (3.0) BS01 rna N/A GO:0002181 ... C4LZH1 40835601
    1062234 9v21:ll (3.0) BS01 rna N/A GO:0000448 ... C4M0X0 40835601
    1062235 9v21:ll (3.0) BS02 rna N/A GO:0000448 ... C4M0X0 40835601
    1062236 9v21:lm (3.0) BS01 rna N/A GO:0003735 ... N9UZL4 40835601
    1062237 9v21:ln (3.0) BS01 rna N/A GO:0002181 ... C4M7I6 40835601
    1062238 9v21:lo (3.0) BS01 rna N/A GO:0002181 ... C4LTA2 40835601
    1062239 9v21:lo (3.0) BS02 rna N/A GO:0002181 ... C4LTA2 40835601
    1062240 9v21:lp (3.0) BS01 rna N/A GO:0003735 ... C4LV09 40835601
    1062241 9v21:lq (3.0) BS01 rna N/A GO:0002181 ... C4LS99 40835601
    1062242 9v21:sA (3.0) BS01 rna N/A GO:0003735 ... C4M9F4 40835601
    1062243 9v21:sB (3.0) BS01 rna N/A GO:0003729 ... C4M7G9 40835601
    1062244 9v21:sC (3.0) BS01 rna N/A GO:0003735 ... P38654 40835601
    1062245 9v21:sD (3.0) BS01 rna N/A GO:0000028 ... C4LZQ8 40835601
    1062246 9v21:sE (3.0) BS01 rna N/A GO:0002181 ... C4LW10 40835601
    1062247 9v21:sG (3.0) BS01 rna N/A GO:0005080 ... C4LTS8 40835601
    1062248 9v21:sb (3.0) BS01 rna N/A GO:0000028 ... C4M5A0 40835601
    1062249 9v21:sc (3.0) BS01 rna N/A GO:0003723 ... C4M7U0 40835601
    1062250 9v21:sd (3.0) BS01 rna N/A GO:0003723 ... C4LT02 40835601
    1062251 9v21:se (3.0) BS01 rna N/A GO:0003735 ... C4LTQ5 40835601
    1062252 9v21:sf (3.0) BS01 rna N/A GO:0003723 ... C4LYF4 40835601
    1062253 9v21:sg (3.0) BS01 rna N/A GO:0003723 ... O15587 40835601
    1062254 9v21:sh (3.0) BS01 rna N/A GO:0003735 ... C4LXN2 40835601
    1062255 9v21:si (3.0) BS01 rna N/A GO:0003735 ... C4M9F9 40835601
    1062256 9v21:sj (3.0) BS01 rna N/A GO:0002181 ... C4M8Y8 40835601
    1062257 9v21:sj (3.0) BS02 rna N/A GO:0002181 ... C4M8Y8 40835601
    1062258 9v21:sk (3.0) BS01 rna N/A GO:0003723 ... O15612 40835601
    1062259 9v21:sl (3.0) BS01 rna N/A GO:0000822 ... C4LVC0 40835601
    1062260 9v21:sm (3.0) BS01 rna N/A GO:0003735 ... C4M979 40835601
    1062261 9v21:sn (3.0) BS01 rna N/A GO:0003735 ... C4LSC4 40835601
    1062262 9v21:so (3.0) BS01 rna N/A GO:0000462 ... A0A175JJM9 40835601
    1062263 9v21:sp (3.0) BS01 rna N/A GO:0000028 ... B1N2I3 40835601
    1062264 9v21:sq (3.0) BS01 rna N/A GO:0003723 ... C4M0C6 40835601
    1062265 9v21:sr (3.0) BS01 rna N/A GO:0003735 ... C4LXM0 40835601
    1062266 9v21:ss (3.0) BS01 rna N/A GO:0000462 ... B1N316 40835601
    1062267 9v21:st (3.0) BS01 rna N/A GO:0003735 ... C4M0Z2 40835601
    1062268 9v21:su (3.0) BS01 rna N/A GO:0003676 ... P48151 40835601
    1062269 9v21:sv (3.0) BS01 rna N/A GO:0003735 ... O15631 40835601
    1062270 9v21:sw (3.0) BS01 rna N/A GO:0003735 ... C4M5V7 40835601
    1062271 9v21:sy (3.0) BS01 rna N/A GO:0003735 ... C4M5B7 40835601
    1062272 9v21:sz (3.0) BS01 rna N/A GO:0002181 ... C4M549 40835601
    1062273 9v24:lD (3.1) BS01 rna N/A GO:0002181 ... O15574 40835601
    1062274 9v24:lD (3.1) BS02 rna N/A GO:0002181 ... O15574 40835601
    1062275 9v24:lE (3.1) BS01 rna N/A GO:0003723 ... C4LW09 40835601
    1062276 9v24:lF (3.1) BS01 rna N/A GO:0003723 ... B1N384 40835601
    1062277 9v24:lF (3.1) BS02 rna N/A GO:0003723 ... B1N384 40835601
    1062278 9v24:lG (3.1) BS01 rna N/A GO:0000027 ... C4LU56 40835601
    1062279 9v24:lG (3.1) BS02 rna N/A GO:0000027 ... C4LU56 40835601
    1062280 9v24:lH (3.1) BS01 rna N/A GO:0002181 ... O15595 40835601
    1062281 9v24:lI (3.1) BS01 rna N/A GO:0000463 ... C4M751 40835601
    1062282 9v24:lI (3.1) BS02 rna N/A GO:0000463 ... C4M751 40835601
    1062283 9v24:lJ (3.1) BS01 rna N/A GO:0000470 ... C4LVH6 40835601
    1062284 9v24:lJ (3.1) BS02 rna N/A GO:0000470 ... C4LVH6 40835601
    1062285 9v24:lK (3.1) BS01 rna N/A GO:0002181 ... C4LVZ9 40835601
    1062286 9v24:lL (3.1) BS01 rna N/A GO:0003735 ... C4LTA0 40835601
    1062287 9v24:lL (3.1) BS02 rna N/A GO:0003735 ... C4LTA0 40835601
    1062288 9v24:lL (3.1) BS03 rna N/A GO:0003735 ... C4LTA0 40835601
    1062289 9v24:lM (3.1) BS01 rna N/A GO:0003723 ... C4LZG9 40835601
    1062290 9v24:lM (3.1) BS02 rna N/A GO:0003723 ... C4LZG9 40835601
    1062291 9v24:lN (3.1) BS01 rna N/A GO:0003723 ... C4M8R8 40835601
    1062292 9v24:lN (3.1) BS02 rna N/A GO:0003723 ... C4M8R8 40835601
    1062293 9v24:lO (3.1) BS01 rna N/A GO:0003729 ... C4M3F3 40835601
    1062294 9v24:lP (3.1) BS01 rna N/A GO:0003723 ... C4M8C9 40835601
    1062295 9v24:lQ (3.1) BS01 rna N/A GO:0002181 ... C4M7U2 40835601
    1062296 9v24:lQ (3.1) BS02 rna N/A GO:0002181 ... C4M7U2 40835601
    1062297 9v24:lR (3.1) BS01 rna N/A GO:0002181 ... C4LX05 40835601
    1062298 9v24:lR (3.1) BS02 rna N/A GO:0002181 ... C4LX05 40835601
    1062299 9v24:lS (3.1) BS01 rna N/A GO:0002181 ... C4LXC8 40835601
    1062300 9v24:lT (3.1) BS01 rna N/A GO:0002181 ... C4LXZ0 40835601
    1062301 9v24:lT (3.1) BS02 rna N/A GO:0002181 ... C4LXZ0 40835601
    1062302 9v24:lU (3.1) BS01 rna N/A GO:0003723 ... C4LWJ4 40835601
    1062303 9v24:lV (3.1) BS01 rna N/A GO:0003735 ... C4LV69 40835601
    1062304 9v24:lV (3.1) BS02 rna N/A GO:0003735 ... C4LV69 40835601
    1062305 9v24:lW (3.1) BS01 rna N/A GO:0002181 ... C4LW40 40835601
    1062306 9v24:lX (3.1) BS01 rna N/A GO:0003735 ... C4LVB0 40835601
    1062307 9v24:lY (3.1) BS01 rna N/A GO:0003735 ... C4LV64 40835601
    1062308 9v24:lY (3.1) BS02 rna N/A GO:0003735 ... C4LV64 40835601
    1062309 9v24:lZ (3.1) BS01 rna N/A GO:0002181 ... C4LSA0 40835601
    1062310 9v24:la (3.1) BS01 rna N/A GO:0002181 ... C4LSU3 40835601
    1062311 9v24:la (3.1) BS02 rna N/A GO:0002181 ... C4LSU3 40835601
    1062312 9v24:lb (3.1) BS01 rna N/A GO:0003735 ... C4M727 40835601
    1062313 9v24:lc (3.1) BS01 rna N/A GO:0003735 ... Q9BI06 40835601
    1062314 9v24:ld (3.1) BS01 rna N/A GO:0002181 ... C4LUN3 40835601
    1062315 9v24:le (3.1) BS01 rna N/A GO:0003723 ... C4M919 40835601
    1062316 9v24:lf (3.1) BS01 rna N/A GO:0002181 ... C4LU13 40835601
    1062317 9v24:lg (3.1) BS01 rna N/A GO:0003735 ... C4LT96 40835601
    1062318 9v24:lh (3.1) BS01 rna N/A GO:0003735 ... C4LYA7 40835601
    1062319 9v24:li (3.1) BS01 rna N/A GO:0000463 ... N/A 40835601
    1062320 9v24:li (3.1) BS02 rna N/A GO:0000463 ... N/A 40835601
    1062321 9v24:lj (3.1) BS01 rna N/A GO:0002181 ... B1N4V3 40835601
    1062322 9v24:lk (3.1) BS01 rna N/A GO:0002181 ... C4LZH1 40835601
    1062323 9v24:ll (3.1) BS01 rna N/A GO:0000448 ... C4M0X0 40835601
    1062324 9v24:ll (3.1) BS02 rna N/A GO:0000448 ... C4M0X0 40835601
    1062325 9v24:lm (3.1) BS01 rna N/A GO:0003735 ... A0A175JXH6 40835601
    1062326 9v24:ln (3.1) BS01 rna N/A GO:0003735 ... A0A175JTS8 40835601
    1062327 9v24:lo (3.1) BS01 rna N/A GO:0002181 ... C4LTA2 40835601
    1062328 9v24:lo (3.1) BS02 rna N/A GO:0002181 ... C4LTA2 40835601
    1062329 9v24:lp (3.1) BS01 rna N/A GO:0003735 ... C4LV09 40835601
    1062330 9v24:lq (3.1) BS01 rna N/A GO:0002181 ... C4LS99 40835601
    1062331 9v24:lq (3.1) BS02 rna N/A GO:0002181 ... C4LS99 40835601
    1062332 9v24:sA (3.1) BS01 rna N/A GO:0003735 ... C4M9F4 40835601
    1062333 9v24:sB (3.1) BS01 rna N/A GO:0003729 ... C4M7G9 40835601
    1062334 9v24:sC (3.1) BS01 rna N/A GO:0003735 ... P38654 40835601
    1062335 9v24:sD (3.1) BS01 rna N/A GO:0000028 ... C4LZQ8 40835601
    1062336 9v24:sE (3.1) BS01 rna N/A GO:0002181 ... C4LW10 40835601
    1062337 9v24:sb (3.1) BS01 rna N/A GO:0000028 ... C4M5A0 40835601
    1062338 9v24:sc (3.1) BS01 rna N/A GO:0003723 ... C4M7U0 40835601
    1062339 9v24:sd (3.1) BS01 rna N/A GO:0003723 ... C4LT02 40835601
    1062340 9v24:se (3.1) BS01 rna N/A GO:0003735 ... C4M609 40835601
    1062341 9v24:sf (3.1) BS01 rna N/A GO:0003723 ... C4LYF4 40835601
    1062342 9v24:sg (3.1) BS01 rna N/A GO:0003723 ... O15587 40835601
    1062343 9v24:sh (3.1) BS01 rna N/A GO:0003735 ... C4LXN2 40835601
    1062344 9v24:si (3.1) BS01 rna N/A GO:0003735 ... C4M9F9 40835601
    1062345 9v24:sj (3.1) BS01 rna N/A GO:0002181 ... C4M8Y8 40835601
    1062346 9v24:sk (3.1) BS01 rna N/A GO:0003723 ... O15612 40835601
    1062347 9v24:sl (3.1) BS01 rna N/A GO:0000822 ... C4LVC0 40835601
    1062348 9v24:sm (3.1) BS01 rna N/A GO:0003735 ... C4M979 40835601
    1062349 9v24:so (3.1) BS01 rna N/A GO:0000462 ... A0A175JJM9 40835601
    1062350 9v24:sp (3.1) BS01 rna N/A GO:0000028 ... B1N2I3 40835601
    1062351 9v24:sq (3.1) BS01 rna N/A GO:0003723 ... C4M7H3 40835601
    1062352 9v24:sr (3.1) BS01 rna N/A GO:0003735 ... C4LXM0 40835601
    1062353 9v24:ss (3.1) BS01 rna N/A GO:0000462 ... C4M2R7 40835601
    1062354 9v24:st (3.1) BS01 rna N/A GO:0003735 ... C4M0Z2 40835601
    1062355 9v24:su (3.1) BS01 rna N/A GO:0003676 ... P48151 40835601
    1062356 9v24:sv (3.1) BS01 rna N/A GO:0003735 ... O15631 40835601
    1062357 9v24:sw (3.1) BS01 rna N/A GO:0003735 ... C4M5V7 40835601
    1062358 9v24:sy (3.1) BS01 rna N/A GO:0003735 ... C4M5B7 40835601
    1062359 9v25:lD (3.0) BS01 rna N/A GO:0002181 ... O15574 40835601
    1062360 9v25:lE (3.0) BS01 rna N/A GO:0003723 ... C4LW09 40835601
    1062361 9v25:lF (3.0) BS01 rna N/A GO:0003723 ... B1N384 40835601
    1062362 9v25:lF (3.0) BS02 rna N/A GO:0003723 ... B1N384 40835601
    1062363 9v25:lG (3.0) BS01 rna N/A GO:0000027 ... C4LU56 40835601
    1062364 9v25:lG (3.0) BS02 rna N/A GO:0000027 ... C4LU56 40835601
    1062365 9v25:lH (3.0) BS01 rna N/A GO:0002181 ... O15595 40835601
    1062366 9v25:lI (3.0) BS01 rna N/A GO:0000463 ... C4M751 40835601
    1062367 9v25:lI (3.0) BS02 rna N/A GO:0000463 ... C4M751 40835601
    1062368 9v25:lJ (3.0) BS01 rna N/A GO:0000470 ... C4LVH6 40835601
    1062369 9v25:lJ (3.0) BS02 rna N/A GO:0000470 ... C4LVH6 40835601
    1062370 9v25:lK (3.0) BS01 rna N/A GO:0002181 ... C4LVZ9 40835601
    1062371 9v25:lL (3.0) BS01 rna N/A GO:0003735 ... C4LTA0 40835601
    1062372 9v25:lL (3.0) BS02 rna N/A GO:0003735 ... C4LTA0 40835601
    1062373 9v25:lL (3.0) BS03 rna N/A GO:0003735 ... C4LTA0 40835601
    1062374 9v25:lM (3.0) BS01 rna N/A GO:0003723 ... C4LZG9 40835601
    1062375 9v25:lM (3.0) BS02 rna N/A GO:0003723 ... C4LZG9 40835601
    1062376 9v25:lN (3.0) BS01 rna N/A GO:0003723 ... C4M8R8 40835601
    1062377 9v25:lN (3.0) BS02 rna N/A GO:0003723 ... C4M8R8 40835601
    1062378 9v25:lO (3.0) BS01 rna N/A GO:0003729 ... C4M3F3 40835601
    1062379 9v25:lP (3.0) BS01 rna N/A GO:0003723 ... C4M8C9 40835601
    1062380 9v25:lQ (3.0) BS01 rna N/A GO:0002181 ... C4M7U2 40835601
    1062381 9v25:lQ (3.0) BS02 rna N/A GO:0002181 ... C4M7U2 40835601
    1062382 9v25:lR (3.0) BS01 rna N/A GO:0002181 ... C4LX05 40835601
    1062383 9v25:lR (3.0) BS02 rna N/A GO:0002181 ... C4LX05 40835601
    1062384 9v25:lS (3.0) BS01 rna N/A GO:0002181 ... C4LXC8 40835601
    1062385 9v25:lT (3.0) BS01 rna N/A GO:0002181 ... C4LXZ0 40835601
    1062386 9v25:lT (3.0) BS02 rna N/A GO:0002181 ... C4LXZ0 40835601
    1062387 9v25:lU (3.0) BS01 rna N/A GO:0003723 ... C4LWJ4 40835601
    1062388 9v25:lV (3.0) BS01 rna N/A GO:0003735 ... C4LV69 40835601
    1062389 9v25:lV (3.0) BS02 rna N/A GO:0003735 ... C4LV69 40835601
    1062390 9v25:lW (3.0) BS01 rna N/A GO:0002181 ... C4LW40 40835601
    1062391 9v25:lX (3.0) BS01 rna N/A GO:0003735 ... C4LVB0 40835601
    1062392 9v25:lY (3.0) BS01 rna N/A GO:0003735 ... C4LV64 40835601
    1062393 9v25:lY (3.0) BS02 rna N/A GO:0003735 ... C4LV64 40835601
    1062394 9v25:lZ (3.0) BS01 rna N/A GO:0002181 ... C4LSA0 40835601
    1062395 9v25:la (3.0) BS01 rna N/A GO:0002181 ... C4LSU3 40835601
    1062396 9v25:la (3.0) BS02 rna N/A GO:0002181 ... C4LSU3 40835601
    1062397 9v25:lb (3.0) BS01 rna N/A GO:0003735 ... C4M727 40835601
    1062398 9v25:lc (3.0) BS01 rna N/A GO:0003735 ... Q9BI06 40835601
    1062399 9v25:ld (3.0) BS01 rna N/A GO:0002181 ... C4LUN3 40835601
    1062400 9v25:le (3.0) BS01 rna N/A GO:0003723 ... C4M919 40835601

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).