SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1062601 9v4m:D (3.0) BS04 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1062602 9v4m:D (3.0) BS05 ZN N/A GO:0000287 ... Q8RQE8 41094128
    1062603 9v4m:D (3.0) BS06 MG N/A GO:0000287 ... Q8RQE8 41094128
    1062604 9v4m:F (3.0) BS01 dna N/A GO:0003677 ... Q5SKW1 41094128
    1062605 9v4m:F (3.0) BS02 dna N/A GO:0003677 ... Q5SKW1 41094128
    1062606 9v4o:A (2.92) BS01 SAH N/A GO:0003677 ... P34881 41082561
    1062607 9v4o:A (2.92) BS02 ZN N/A GO:0003677 ... P34881 41082561
    1062608 9v4p:A (2.34) BS01 dna N/A N/A P34881 41082561
    1062609 9v4p:A (2.34) BS02 dna N/A N/A P34881 41082561
    1062610 9v4p:A (2.34) BS03 SAH N/A N/A P34881 41082561
    1062611 9v4p:A (2.34) BS04 ZN N/A N/A P34881 41082561
    1062612 9v57:C (3.04) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062613 9v57:F (3.04) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062614 9v57:I (3.04) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062615 9v57:L (3.04) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062616 9v57:a (3.04) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062617 9v57:d (3.04) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062618 9v57:o (3.04) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062619 9v57:r (3.04) BS01 Y43 N/A GO:0005737 ... A0AAC8QDB0 41638213
    1062620 9v59:A (2.175) BS01 GLC N/A GO:0003824 ... N/A 41005291
    1062621 9v59:A (2.175) BS02 GLC N/A GO:0003824 ... N/A 41005291
    1062622 9v59:A (2.175) BS03 GLC N/A GO:0003824 ... N/A 41005291
    1062623 9v59:A (2.175) BS04 CA N/A GO:0003824 ... N/A 41005291
    1062624 9v59:A (2.175) BS05 CA N/A GO:0003824 ... N/A 41005291
    1062625 9v59:A (2.175) BS06 CA N/A GO:0003824 ... N/A 41005291
    1062626 9v59:A (2.175) BS07 CA N/A GO:0003824 ... N/A 41005291
    1062627 9v59:A (2.175) BS08 A1EQX N/A GO:0003824 ... N/A 41005291
    1062628 9v59:A (2.175) BS09 GLC N/A GO:0003824 ... N/A 41005291
    1062629 9v59:A (2.175) BS10 GLC N/A GO:0003824 ... N/A 41005291
    1062630 9v59:B (2.175) BS01 GLC N/A GO:0003824 ... N/A 41005291
    1062631 9v59:B (2.175) BS02 CA N/A GO:0003824 ... N/A 41005291
    1062632 9v59:B (2.175) BS03 CA N/A GO:0003824 ... N/A 41005291
    1062633 9v59:B (2.175) BS04 CA N/A GO:0003824 ... N/A 41005291
    1062634 9v59:B (2.175) BS05 CA N/A GO:0003824 ... N/A 41005291
    1062635 9v59:B (2.175) BS06 A1EQX N/A GO:0003824 ... N/A 41005291
    1062636 9v59:B (2.175) BS07 GLC N/A GO:0003824 ... N/A 41005291
    1062637 9v59:B (2.175) BS08 GLC N/A GO:0003824 ... N/A 41005291
    1062638 9v59:B (2.175) BS09 GLC N/A GO:0003824 ... N/A 41005291
    1062639 9v5s:A (2.24) BS01 GDP N/A GO:0000287 ... P23568 N/A
    1062640 9v5s:B (2.24) BS01 GDP N/A GO:0000287 ... P23568 N/A
    1062641 9v5s:C (2.24) BS01 GDP N/A GO:0000287 ... P23568 N/A
    1062642 9v5s:D (2.24) BS01 GDP N/A GO:0000287 ... P23568 N/A
    1062643 9v69:A (0.96) BS01 FDA N/A GO:0004128 ... P83686 41172987
    1062644 9v69:A (0.96) BS02 NAD N/A GO:0004128 ... P83686 41172987
    1062645 9v6a:A (0.94) BS01 FAD N/A GO:0004128 ... P83686 41172987
    1062646 9v6a:A (0.94) BS02 NAI N/A GO:0004128 ... P83686 41172987
    1062647 9v6b:A (1.6) BS01 FAD N/A GO:0004128 ... P83686 41172987
    1062648 9v6c:A (1.45) BS01 FAD N/A GO:0004128 ... P83686 41172987
    1062649 9v6j:A (3.23) BS01 CA N/A GO:0003779 ... Q9QX29 41584354
    1062650 9v6j:A (3.23) BS02 A1EH7 N/A GO:0003779 ... Q9QX29 41584354
    1062651 9v6j:B (3.23) BS01 A1EH7 N/A GO:0003779 ... Q9QX29 41584354
    1062652 9v6j:C (3.23) BS01 CA N/A GO:0003779 ... Q9QX29 41584354
    1062653 9v6j:C (3.23) BS02 A1EH7 N/A GO:0003779 ... Q9QX29 41584354
    1062654 9v6j:D (3.23) BS01 A1EH7 N/A GO:0003779 ... Q9QX29 41584354
    1062655 9v6j:E (3.23) BS01 A1EH7 N/A GO:0003779 ... Q9QX29 41584354
    1062656 9v6j:F (3.23) BS01 A1EH7 N/A GO:0003779 ... Q9QX29 41584354
    1062657 9v6j:H (3.23) BS01 A1EH7 N/A GO:0003779 ... Q9QX29 41584354
    1062658 9v6o:R (2.76) BS01 IVB N/A N/A P41145 41152269
    1062659 9v70:A (2.82) BS01 ADP N/A N/A A0A0P0XII1 41403133
    1062660 9v70:A (2.82) BS02 MG N/A N/A A0A0P0XII1 41403133
    1062661 9v70:B (2.82) BS01 ADP N/A N/A A0A0P0XII1 41403133
    1062662 9v71:A (2.52) BS01 ADP N/A N/A A0A0P0XII1 41403133
    1062663 9v71:A (2.52) BS02 MG N/A N/A A0A0P0XII1 41403133
    1062664 9v72:A (2.755) BS01 MG N/A N/A A0A0P0XII1 41403133
    1062665 9v72:A (2.755) BS02 ADP N/A N/A A0A0P0XII1 41403133
    1062666 9v72:B (2.755) BS01 ADP N/A N/A A0A0P0XII1 41403133
    1062667 9v73:A (2.27) BS01 ANP N/A N/A A0A0P0XII1 41403133
    1062668 9v79:A (2.12) BS01 MG N/A N/A A0A0P0XII1 41403133
    1062669 9v79:A (2.12) BS02 ANP N/A N/A A0A0P0XII1 41403133
    1062670 9v7e:A (1.97) BS01 ADP N/A N/A A0A0P0XII1 41403133
    1062671 9v7e:A (1.97) BS02 MG N/A N/A A0A0P0XII1 41403133
    1062672 9v7k:C (2.94) BS01 peptide N/A GO:0015979 ... Q7NL80 41091862
    1062673 9v7v:A (3.6) BS01 G2P N/A GO:0003924 ... Q8TX55 40781499
    1062674 9v7v:B (3.6) BS01 G2P N/A GO:0003924 ... Q8TX55 40781499
    1062675 9v7v:B (3.6) BS02 G2P N/A GO:0003924 ... Q8TX55 40781499
    1062676 9v7v:C (3.6) BS01 G2P N/A GO:0003924 ... Q8TX55 40781499
    1062677 9v7v:C (3.6) BS02 G2P N/A GO:0003924 ... Q8TX55 40781499
    1062678 9v7v:D (3.6) BS01 G2P N/A GO:0003924 ... Q8TX55 40781499
    1062679 9v7w:A (1.86) BS01 peptide N/A GO:0017136 ... Q8IXJ6 40963517
    1062680 9v7w:A (1.86) BS02 NAD N/A GO:0017136 ... Q8IXJ6 40963517
    1062681 9v7w:A (1.86) BS03 ZN N/A GO:0017136 ... Q8IXJ6 40963517
    1062682 9v84:A (2.4) BS01 9N8 N/A N/A Q96MU7 N/A
    1062683 9v84:B (2.4) BS01 9N8 N/A N/A Q96MU7 N/A
    1062684 9v84:C (2.4) BS01 9N8 N/A N/A Q96MU7 N/A
    1062685 9v84:D (2.4) BS01 9N8 N/A N/A Q96MU7 N/A
    1062686 9v84:E (2.4) BS01 9N8 N/A N/A Q96MU7 N/A
    1062687 9v84:F (2.4) BS01 9N8 N/A N/A Q96MU7 N/A
    1062688 9v84:G (2.4) BS01 9N8 N/A N/A Q96MU7 N/A
    1062689 9v84:H (2.4) BS01 9N8 N/A N/A Q96MU7 N/A
    1062690 9v85:A (2.1) BS01 CA N/A N/A A0A2Z5WK79 41511108
    1062691 9v85:C (2.1) BS01 CA N/A N/A A0A2Z5WK79 41511108
    1062692 9v8d:A (1.44) BS01 peptide N/A GO:0003677 ... P37231 41188059
    1062693 9v8e:A (1.7) BS01 peptide N/A GO:0003677 ... P37231 41188059
    1062694 9v8f:A (1.75) BS01 peptide N/A GO:0003677 ... P37231 41188059
    1062695 9v8g:A (1.39) BS01 peptide N/A GO:0003677 ... P37231 41188059
    1062696 9v8h:A (1.39) BS01 peptide N/A GO:0003677 ... P37231 41188059
    1062697 9v8h:A (1.39) BS02 BRL N/A GO:0003677 ... P37231 41188059
    1062698 9v92:A (1.97) BS01 QCF N/A GO:0000413 ... Q13526 40803165
    1062699 9va7:A (2.234) BS01 IHP N/A N/A A0AAN5PJ36 N/A
    1062700 9va7:B (2.234) BS01 IHP N/A N/A A0AAN5PJ36 N/A
    1062701 9va7:C (2.234) BS01 IHP N/A N/A A0AAN5PJ36 N/A
    1062702 9va7:D (2.234) BS01 IHP N/A N/A A0AAN5PJ36 N/A
    1062703 9va7:E (2.234) BS01 IHP N/A N/A A0AAN5PJ36 N/A
    1062704 9va7:F (2.234) BS01 IHP N/A N/A A0AAN5PJ36 N/A
    1062705 9va7:G (2.234) BS01 IHP N/A N/A A0AAN5PJ36 N/A
    1062706 9va7:H (2.234) BS01 IHP N/A N/A A0AAN5PJ36 N/A
    1062707 9vak:A (2.0) BS01 GAL N/A N/A B3TLD6 41204437
    1062708 9vak:A (2.0) BS02 CA N/A N/A B3TLD6 41204437
    1062709 9vak:B (2.0) BS01 GAL N/A N/A B3TLD6 41204437
    1062710 9vak:B (2.0) BS02 CA N/A N/A B3TLD6 41204437
    1062711 9vak:C (2.0) BS01 GAL N/A N/A B3TLD6 41204437
    1062712 9vak:C (2.0) BS02 CA N/A N/A B3TLD6 41204437
    1062713 9vak:D (2.0) BS01 GAL N/A N/A B3TLD6 41204437
    1062714 9vak:D (2.0) BS02 CA N/A N/A B3TLD6 41204437
    1062715 9vao:A (1.82) BS01 ZN N/A GO:0006508 ... P0DTD1 41044763
    1062716 9vbg:A (2.9) BS01 BMA N/A N/A Q8IV08 41381514
    1062717 9vbg:A (2.9) BS02 MAN N/A N/A Q8IV08 41381514
    1062718 9vbg:B (2.9) BS01 BMA N/A N/A Q8IV08 41381514
    1062719 9vbg:B (2.9) BS02 MAN N/A N/A Q8IV08 41381514
    1062720 9vbh:A (2.85) BS01 dna N/A N/A Q8IV08 41381514
    1062721 9vbh:A (2.85) BS02 BMA N/A N/A Q8IV08 41381514
    1062722 9vbh:C (2.85) BS01 dna N/A N/A Q8IV08 41381514
    1062723 9vbh:C (2.85) BS02 BMA N/A N/A Q8IV08 41381514
    1062724 9vbi:A (2.87) BS01 dna N/A N/A Q8IV08 41381514
    1062725 9vbi:A (2.87) BS02 BMA N/A N/A Q8IV08 41381514
    1062726 9vbi:D (2.87) BS01 dna N/A N/A Q8IV08 41381514
    1062727 9vbi:D (2.87) BS02 BMA N/A N/A Q8IV08 41381514
    1062728 9vbk:A (3.06) BS01 dna N/A N/A Q96BZ4 41381514
    1062729 9vbk:A (3.06) BS02 T3P N/A N/A Q96BZ4 41381514
    1062730 9vbk:B (3.06) BS01 dna N/A N/A Q96BZ4 41381514
    1062731 9vbo:G (2.16) BS01 ZN N/A N/A G5JW76 41617701
    1062732 9vbo:H (2.16) BS01 ZN N/A N/A G5JW76 41617701
    1062733 9vbt:G (2.32) BS01 ZN N/A N/A G5JW76 41617701
    1062734 9vbt:H (2.32) BS01 ZN N/A N/A G5JW76 41617701
    1062735 9vbt:K (2.32) BS01 ZN N/A N/A G5JW76 41617701
    1062736 9vbt:L (2.32) BS01 ZN N/A N/A G5JW76 41617701
    1062737 9vbw:A (2.49) BS01 MAN N/A N/A N/A 41786775
    1062738 9vbw:A (2.49) BS02 FUC N/A N/A N/A 41786775
    1062739 9vbw:A (2.49) BS03 CA N/A N/A N/A 41786775
    1062740 9vbw:A (2.49) BS04 MN N/A N/A N/A 41786775
    1062741 9vbw:B (2.49) BS01 MAN N/A N/A N/A 41786775
    1062742 9vbw:B (2.49) BS02 FUC N/A N/A N/A 41786775
    1062743 9vbw:B (2.49) BS03 CA N/A N/A N/A 41786775
    1062744 9vbw:B (2.49) BS04 MN N/A N/A N/A 41786775
    1062745 9vbw:C (2.49) BS01 MAN N/A N/A N/A 41786775
    1062746 9vbw:C (2.49) BS02 GAL N/A N/A N/A 41786775
    1062747 9vbw:C (2.49) BS03 CA N/A N/A N/A 41786775
    1062748 9vbw:C (2.49) BS04 MN N/A N/A N/A 41786775
    1062749 9vbw:D (2.49) BS01 MAN N/A N/A N/A 41786775
    1062750 9vbw:D (2.49) BS02 GAL N/A N/A N/A 41786775
    1062751 9vbw:D (2.49) BS03 CA N/A N/A N/A 41786775
    1062752 9vbw:D (2.49) BS04 MN N/A N/A N/A 41786775
    1062753 9vbw:E (2.49) BS01 MAN N/A N/A N/A 41786775
    1062754 9vbw:E (2.49) BS02 CA N/A N/A N/A 41786775
    1062755 9vbw:E (2.49) BS03 MN N/A N/A N/A 41786775
    1062756 9vbw:F (2.49) BS01 MAN N/A N/A N/A 41786775
    1062757 9vbw:F (2.49) BS02 FUC N/A N/A N/A 41786775
    1062758 9vbw:F (2.49) BS03 CA N/A N/A N/A 41786775
    1062759 9vbw:F (2.49) BS04 MN N/A N/A N/A 41786775
    1062760 9vbw:G (2.49) BS01 MAN N/A N/A N/A 41786775
    1062761 9vbw:G (2.49) BS02 FUC N/A N/A N/A 41786775
    1062762 9vbw:G (2.49) BS03 CA N/A N/A N/A 41786775
    1062763 9vbw:G (2.49) BS04 MN N/A N/A N/A 41786775
    1062764 9vbw:H (2.49) BS01 MAN N/A N/A N/A 41786775
    1062765 9vbw:H (2.49) BS02 CA N/A N/A N/A 41786775
    1062766 9vbw:H (2.49) BS03 MN N/A N/A N/A 41786775
    1062767 9vbw:I (2.49) BS01 MAN N/A N/A N/A 41786775
    1062768 9vbw:I (2.49) BS02 FUC N/A N/A N/A 41786775
    1062769 9vbw:I (2.49) BS03 CA N/A N/A N/A 41786775
    1062770 9vbw:I (2.49) BS04 MN N/A N/A N/A 41786775
    1062771 9vbw:J (2.49) BS01 MAN N/A N/A N/A 41786775
    1062772 9vbw:J (2.49) BS02 CA N/A N/A N/A 41786775
    1062773 9vbw:J (2.49) BS03 MN N/A N/A N/A 41786775
    1062774 9vbw:K (2.49) BS01 MAN N/A N/A N/A 41786775
    1062775 9vbw:K (2.49) BS02 FUC N/A N/A N/A 41786775
    1062776 9vbw:K (2.49) BS03 GAL N/A N/A N/A 41786775
    1062777 9vbw:K (2.49) BS04 CA N/A N/A N/A 41786775
    1062778 9vbw:K (2.49) BS05 MN N/A N/A N/A 41786775
    1062779 9vbw:L (2.49) BS01 MAN N/A N/A N/A 41786775
    1062780 9vbw:L (2.49) BS02 CA N/A N/A N/A 41786775
    1062781 9vbw:L (2.49) BS03 MN N/A N/A N/A 41786775
    1062782 9vbw:M (2.49) BS01 MAN N/A N/A N/A 41786775
    1062783 9vbw:M (2.49) BS02 FUC N/A N/A N/A 41786775
    1062784 9vbw:M (2.49) BS03 CA N/A N/A N/A 41786775
    1062785 9vbw:M (2.49) BS04 MN N/A N/A N/A 41786775
    1062786 9vbw:N (2.49) BS01 MAN N/A N/A N/A 41786775
    1062787 9vbw:N (2.49) BS02 CA N/A N/A N/A 41786775
    1062788 9vbw:N (2.49) BS03 MN N/A N/A N/A 41786775
    1062789 9vbw:O (2.49) BS01 MAN N/A N/A N/A 41786775
    1062790 9vbw:O (2.49) BS02 FUC N/A N/A N/A 41786775
    1062791 9vbw:O (2.49) BS03 CA N/A N/A N/A 41786775
    1062792 9vbw:O (2.49) BS04 MN N/A N/A N/A 41786775
    1062793 9vbw:P (2.49) BS01 MAN N/A N/A N/A 41786775
    1062794 9vbw:P (2.49) BS02 CA N/A N/A N/A 41786775
    1062795 9vbw:P (2.49) BS03 MN N/A N/A N/A 41786775
    1062796 9vbx:A (2.4) BS01 MAN N/A N/A N/A 41786775
    1062797 9vbx:A (2.4) BS02 CA N/A N/A N/A 41786775
    1062798 9vbx:A (2.4) BS03 MN N/A N/A N/A 41786775
    1062799 9vbx:B (2.4) BS01 MAN N/A N/A N/A 41786775
    1062800 9vbx:B (2.4) BS02 CA N/A N/A N/A 41786775

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).