SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1063201 9vfj:7 (2.83) BS02 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063202 9vfj:7 (2.83) BS03 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063203 9vfj:7 (2.83) BS04 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063204 9vfj:7 (2.83) BS05 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063205 9vfj:7 (2.83) BS06 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063206 9vfj:7 (2.83) BS07 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063207 9vfj:7 (2.83) BS08 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063208 9vfj:7 (2.83) BS09 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063209 9vfj:7 (2.83) BS10 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063210 9vfj:7 (2.83) BS11 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063211 9vfj:7 (2.83) BS12 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063212 9vfj:7 (2.83) BS13 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063213 9vfj:7 (2.83) BS14 DD6 N/A GO:0009765 ... A8HPC6 41171917
    1063214 9vfj:7 (2.83) BS15 DD6 N/A GO:0009765 ... A8HPC6 41171917
    1063215 9vfj:7 (2.83) BS16 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063216 9vfj:8 (2.83) BS01 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063217 9vfj:8 (2.83) BS02 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063218 9vfj:8 (2.83) BS03 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063219 9vfj:8 (2.83) BS04 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063220 9vfj:8 (2.83) BS05 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063221 9vfj:8 (2.83) BS06 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063222 9vfj:8 (2.83) BS07 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063223 9vfj:8 (2.83) BS08 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063224 9vfj:8 (2.83) BS09 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063225 9vfj:8 (2.83) BS10 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063226 9vfj:8 (2.83) BS11 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063227 9vfj:8 (2.83) BS12 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063228 9vfj:8 (2.83) BS13 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063229 9vfj:8 (2.83) BS14 DD6 N/A GO:0009765 ... A8HPC6 41171917
    1063230 9vfj:8 (2.83) BS15 DD6 N/A GO:0009765 ... A8HPC6 41171917
    1063231 9vfj:9 (2.83) BS01 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063232 9vfj:9 (2.83) BS02 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063233 9vfj:9 (2.83) BS03 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063234 9vfj:9 (2.83) BS04 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063235 9vfj:9 (2.83) BS05 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063236 9vfj:9 (2.83) BS06 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063237 9vfj:9 (2.83) BS07 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063238 9vfj:9 (2.83) BS08 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063239 9vfj:9 (2.83) BS09 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063240 9vfj:9 (2.83) BS10 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063241 9vfj:9 (2.83) BS11 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063242 9vfj:9 (2.83) BS12 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063243 9vfj:9 (2.83) BS13 CLA N/A GO:0009765 ... A8HPC6 41171917
    1063244 9vfj:9 (2.83) BS14 DD6 N/A GO:0009765 ... A8HPC6 41171917
    1063245 9vfj:9 (2.83) BS15 DD6 N/A GO:0009765 ... A8HPC6 41171917
    1063246 9vfj:A (2.83) BS01 CL0 N/A GO:0000287 ... P19430 41171917
    1063247 9vfj:A (2.83) BS02 CLA N/A GO:0000287 ... P19430 41171917
    1063248 9vfj:A (2.83) BS03 CLA N/A GO:0000287 ... P19430 41171917
    1063249 9vfj:A (2.83) BS04 CLA N/A GO:0000287 ... P19430 41171917
    1063250 9vfj:A (2.83) BS05 CLA N/A GO:0000287 ... P19430 41171917
    1063251 9vfj:A (2.83) BS06 CLA N/A GO:0000287 ... P19430 41171917
    1063252 9vfj:A (2.83) BS07 CLA N/A GO:0000287 ... P19430 41171917
    1063253 9vfj:A (2.83) BS08 CLA N/A GO:0000287 ... P19430 41171917
    1063254 9vfj:A (2.83) BS09 CLA N/A GO:0000287 ... P19430 41171917
    1063255 9vfj:A (2.83) BS10 CLA N/A GO:0000287 ... P19430 41171917
    1063256 9vfj:A (2.83) BS11 CLA N/A GO:0000287 ... P19430 41171917
    1063257 9vfj:A (2.83) BS12 CLA N/A GO:0000287 ... P19430 41171917
    1063258 9vfj:A (2.83) BS13 CLA N/A GO:0000287 ... P19430 41171917
    1063259 9vfj:A (2.83) BS14 CLA N/A GO:0000287 ... P19430 41171917
    1063260 9vfj:A (2.83) BS15 CLA N/A GO:0000287 ... P19430 41171917
    1063261 9vfj:A (2.83) BS16 CLA N/A GO:0000287 ... P19430 41171917
    1063262 9vfj:A (2.83) BS17 CLA N/A GO:0000287 ... P19430 41171917
    1063263 9vfj:A (2.83) BS18 CLA N/A GO:0000287 ... P19430 41171917
    1063264 9vfj:A (2.83) BS19 CLA N/A GO:0000287 ... P19430 41171917
    1063265 9vfj:A (2.83) BS20 CLA N/A GO:0000287 ... P19430 41171917
    1063266 9vfj:A (2.83) BS21 CLA N/A GO:0000287 ... P19430 41171917
    1063267 9vfj:A (2.83) BS22 CLA N/A GO:0000287 ... P19430 41171917
    1063268 9vfj:A (2.83) BS23 CLA N/A GO:0000287 ... P19430 41171917
    1063269 9vfj:A (2.83) BS24 CLA N/A GO:0000287 ... P19430 41171917
    1063270 9vfj:A (2.83) BS25 CLA N/A GO:0000287 ... P19430 41171917
    1063271 9vfj:A (2.83) BS26 CLA N/A GO:0000287 ... P19430 41171917
    1063272 9vfj:A (2.83) BS27 CLA N/A GO:0000287 ... P19430 41171917
    1063273 9vfj:A (2.83) BS28 CLA N/A GO:0000287 ... P19430 41171917
    1063274 9vfj:A (2.83) BS29 CLA N/A GO:0000287 ... P19430 41171917
    1063275 9vfj:A (2.83) BS30 CLA N/A GO:0000287 ... P19430 41171917
    1063276 9vfj:A (2.83) BS31 CLA N/A GO:0000287 ... P19430 41171917
    1063277 9vfj:A (2.83) BS32 CLA N/A GO:0000287 ... P19430 41171917
    1063278 9vfj:A (2.83) BS33 CLA N/A GO:0000287 ... P19430 41171917
    1063279 9vfj:A (2.83) BS34 CLA N/A GO:0000287 ... P19430 41171917
    1063280 9vfj:A (2.83) BS35 CLA N/A GO:0000287 ... P19430 41171917
    1063281 9vfj:A (2.83) BS36 CLA N/A GO:0000287 ... P19430 41171917
    1063282 9vfj:A (2.83) BS37 CLA N/A GO:0000287 ... P19430 41171917
    1063283 9vfj:A (2.83) BS38 CLA N/A GO:0000287 ... P19430 41171917
    1063284 9vfj:A (2.83) BS39 CLA N/A GO:0000287 ... P19430 41171917
    1063285 9vfj:A (2.83) BS40 CLA N/A GO:0000287 ... P19430 41171917
    1063286 9vfj:A (2.83) BS41 CLA N/A GO:0000287 ... P19430 41171917
    1063287 9vfj:A (2.83) BS42 CLA N/A GO:0000287 ... P19430 41171917
    1063288 9vfj:A (2.83) BS43 PQN N/A GO:0000287 ... P19430 41171917
    1063289 9vfj:A (2.83) BS44 SF4 N/A GO:0000287 ... P19430 41171917
    1063290 9vfj:A (2.83) BS45 CLA N/A GO:0000287 ... P19430 41171917
    1063291 9vfj:A (2.83) BS46 CLA N/A GO:0000287 ... P19430 41171917
    1063292 9vfj:A (2.83) BS47 CLA N/A GO:0000287 ... P19430 41171917
    1063293 9vfj:B (2.83) BS01 CLA N/A GO:0000287 ... P19431 41171917
    1063294 9vfj:B (2.83) BS02 CLA N/A GO:0000287 ... P19431 41171917
    1063295 9vfj:B (2.83) BS03 CLA N/A GO:0000287 ... P19431 41171917
    1063296 9vfj:B (2.83) BS04 CLA N/A GO:0000287 ... P19431 41171917
    1063297 9vfj:B (2.83) BS05 SF4 N/A GO:0000287 ... P19431 41171917
    1063298 9vfj:B (2.83) BS06 CLA N/A GO:0000287 ... P19431 41171917
    1063299 9vfj:B (2.83) BS07 CLA N/A GO:0000287 ... P19431 41171917
    1063300 9vfj:B (2.83) BS08 CLA N/A GO:0000287 ... P19431 41171917
    1063301 9vfj:B (2.83) BS09 CLA N/A GO:0000287 ... P19431 41171917
    1063302 9vfj:B (2.83) BS10 CLA N/A GO:0000287 ... P19431 41171917
    1063303 9vfj:B (2.83) BS11 CLA N/A GO:0000287 ... P19431 41171917
    1063304 9vfj:B (2.83) BS12 CLA N/A GO:0000287 ... P19431 41171917
    1063305 9vfj:B (2.83) BS13 CLA N/A GO:0000287 ... P19431 41171917
    1063306 9vfj:B (2.83) BS14 CLA N/A GO:0000287 ... P19431 41171917
    1063307 9vfj:B (2.83) BS15 CLA N/A GO:0000287 ... P19431 41171917
    1063308 9vfj:B (2.83) BS16 CLA N/A GO:0000287 ... P19431 41171917
    1063309 9vfj:B (2.83) BS17 CLA N/A GO:0000287 ... P19431 41171917
    1063310 9vfj:B (2.83) BS18 CLA N/A GO:0000287 ... P19431 41171917
    1063311 9vfj:B (2.83) BS19 CLA N/A GO:0000287 ... P19431 41171917
    1063312 9vfj:B (2.83) BS20 CLA N/A GO:0000287 ... P19431 41171917
    1063313 9vfj:B (2.83) BS21 CLA N/A GO:0000287 ... P19431 41171917
    1063314 9vfj:B (2.83) BS22 CLA N/A GO:0000287 ... P19431 41171917
    1063315 9vfj:B (2.83) BS23 CLA N/A GO:0000287 ... P19431 41171917
    1063316 9vfj:B (2.83) BS24 CLA N/A GO:0000287 ... P19431 41171917
    1063317 9vfj:B (2.83) BS25 CLA N/A GO:0000287 ... P19431 41171917
    1063318 9vfj:B (2.83) BS26 CLA N/A GO:0000287 ... P19431 41171917
    1063319 9vfj:B (2.83) BS27 CLA N/A GO:0000287 ... P19431 41171917
    1063320 9vfj:B (2.83) BS28 CLA N/A GO:0000287 ... P19431 41171917
    1063321 9vfj:B (2.83) BS29 CLA N/A GO:0000287 ... P19431 41171917
    1063322 9vfj:B (2.83) BS30 CLA N/A GO:0000287 ... P19431 41171917
    1063323 9vfj:B (2.83) BS31 CLA N/A GO:0000287 ... P19431 41171917
    1063324 9vfj:B (2.83) BS32 CLA N/A GO:0000287 ... P19431 41171917
    1063325 9vfj:B (2.83) BS33 CLA N/A GO:0000287 ... P19431 41171917
    1063326 9vfj:B (2.83) BS34 CLA N/A GO:0000287 ... P19431 41171917
    1063327 9vfj:B (2.83) BS35 CLA N/A GO:0000287 ... P19431 41171917
    1063328 9vfj:B (2.83) BS36 CLA N/A GO:0000287 ... P19431 41171917
    1063329 9vfj:B (2.83) BS37 CLA N/A GO:0000287 ... P19431 41171917
    1063330 9vfj:B (2.83) BS38 CLA N/A GO:0000287 ... P19431 41171917
    1063331 9vfj:B (2.83) BS39 CLA N/A GO:0000287 ... P19431 41171917
    1063332 9vfj:B (2.83) BS40 CLA N/A GO:0000287 ... P19431 41171917
    1063333 9vfj:B (2.83) BS41 CLA N/A GO:0000287 ... P19431 41171917
    1063334 9vfj:B (2.83) BS42 CLA N/A GO:0000287 ... P19431 41171917
    1063335 9vfj:B (2.83) BS43 CLA N/A GO:0000287 ... P19431 41171917
    1063336 9vfj:B (2.83) BS44 CLA N/A GO:0000287 ... P19431 41171917
    1063337 9vfj:B (2.83) BS45 PQN N/A GO:0000287 ... P19431 41171917
    1063338 9vfj:B (2.83) BS46 CLA N/A GO:0000287 ... P19431 41171917
    1063339 9vfj:B (2.83) BS47 CLA N/A GO:0000287 ... P19431 41171917
    1063340 9vfj:C (2.83) BS01 SF4 N/A GO:0009055 ... P31556 41171917
    1063341 9vfj:C (2.83) BS02 SF4 N/A GO:0009055 ... P31556 41171917
    1063342 9vfj:D (2.83) BS01 CLA N/A GO:0009522 ... N/A 41171917
    1063343 9vfj:D (2.83) BS02 CLA N/A GO:0009522 ... N/A 41171917
    1063344 9vfj:D (2.83) BS03 CLA N/A GO:0009522 ... N/A 41171917
    1063345 9vfj:F (2.83) BS01 CLA N/A GO:0009522 ... N/A 41171917
    1063346 9vfj:F (2.83) BS02 CLA N/A GO:0009522 ... N/A 41171917
    1063347 9vfj:F (2.83) BS03 CLA N/A GO:0009522 ... N/A 41171917
    1063348 9vfj:F (2.83) BS04 CLA N/A GO:0009522 ... N/A 41171917
    1063349 9vfj:J (2.83) BS01 CLA N/A GO:0009522 ... P30394 41171917
    1063350 9vfj:J (2.83) BS02 CLA N/A GO:0009522 ... P30394 41171917
    1063351 9vfj:J (2.83) BS03 CLA N/A GO:0009522 ... P30394 41171917
    1063352 9vfj:J (2.83) BS04 CLA N/A GO:0009522 ... P30394 41171917
    1063353 9vfj:J (2.83) BS05 DD6 N/A GO:0009522 ... P30394 41171917
    1063354 9vfj:J (2.83) BS06 CLA N/A GO:0009522 ... P30394 41171917
    1063355 9vg0:A (1.61) BS01 peptide N/A GO:0017136 ... Q8IXJ6 40963517
    1063356 9vg0:A (1.61) BS02 ZN N/A GO:0017136 ... Q8IXJ6 40963517
    1063357 9vg3:A (2.15) BS01 peptide N/A GO:0017136 ... Q8IXJ6 40963517
    1063358 9vg3:A (2.15) BS02 ZN N/A GO:0017136 ... Q8IXJ6 40963517
    1063359 9vg4:A (2.3) BS01 A1ER2 N/A GO:0001659 ... Q9C0B1 N/A
    1063360 9vg4:A (2.3) BS02 FE N/A GO:0001659 ... Q9C0B1 N/A
    1063361 9vge:A (2.56) BS01 peptide N/A GO:0017136 ... Q8IXJ6 40963517
    1063362 9vge:A (2.56) BS02 NCA N/A GO:0017136 ... Q8IXJ6 40963517
    1063363 9vge:A (2.56) BS03 ZN N/A GO:0017136 ... Q8IXJ6 40963517
    1063364 9vge:A (2.56) BS04 YDD N/A GO:0017136 ... Q8IXJ6 40963517
    1063365 9vgk:A (2.2) BS01 VB4 N/A GO:0000162 ... N/A N/A
    1063366 9vgk:B (2.2) BS01 VB4 N/A GO:0000162 ... N/A N/A
    1063367 9vgk:C (2.2) BS01 VB4 N/A GO:0000162 ... N/A N/A
    1063368 9vgk:D (2.2) BS01 VB4 N/A GO:0000162 ... N/A N/A
    1063369 9vgv:A (2.5) BS01 A1CF8 N/A GO:0008800 ... Q01166 N/A
    1063370 9vgw:A (2.7) BS01 peptide N/A GO:0000307 ... P12004 40888629
    1063371 9vgw:B (2.7) BS01 peptide N/A GO:0000307 ... P12004 40888629
    1063372 9vgw:C (2.7) BS01 peptide N/A GO:0000307 ... P12004 40888629
    1063373 9vgz:A (2.34) BS01 peptide N/A GO:0017136 ... Q8IXJ6 40963517
    1063374 9vgz:A (2.34) BS02 NAD N/A GO:0017136 ... Q8IXJ6 40963517
    1063375 9vgz:A (2.34) BS03 ZN N/A GO:0017136 ... Q8IXJ6 40963517
    1063376 9vh0:A (2.41) BS01 peptide N/A GO:0017136 ... Q8IXJ6 40963517
    1063377 9vh0:A (2.41) BS02 NAD N/A GO:0017136 ... Q8IXJ6 40963517
    1063378 9vh0:A (2.41) BS03 ZN N/A GO:0017136 ... Q8IXJ6 40963517
    1063379 9vh0:B (2.41) BS01 peptide N/A GO:0017136 ... Q8IXJ6 40963517
    1063380 9vh0:B (2.41) BS02 NAD N/A GO:0017136 ... Q8IXJ6 40963517
    1063381 9vh0:B (2.41) BS03 ZN N/A GO:0017136 ... Q8IXJ6 40963517
    1063382 9vh1:F (3.4) BS01 ZN N/A N/A P0DV92 41277685
    1063383 9vhe:A (2.5) BS01 rna N/A GO:0003964 ... Q46666 41277685
    1063384 9vhe:A (2.5) BS02 dna N/A GO:0003964 ... Q46666 41277685
    1063385 9vhe:B (2.5) BS01 rna N/A GO:0000731 ... P0DV91 41277685
    1063386 9vhe:B (2.5) BS02 dna N/A GO:0000731 ... P0DV91 41277685
    1063387 9vhe:B (2.5) BS03 ATP N/A GO:0000731 ... P0DV91 41277685
    1063388 9vhe:B (2.5) BS04 ATP N/A GO:0000731 ... P0DV91 41277685
    1063389 9vhe:C (2.5) BS01 dna N/A GO:0000731 ... P0DV91 41277685
    1063390 9vhe:C (2.5) BS02 ATP N/A GO:0000731 ... P0DV91 41277685
    1063391 9vhe:C (2.5) BS03 ATP N/A GO:0000731 ... P0DV91 41277685
    1063392 9vhe:D (2.5) BS01 dna N/A GO:0000731 ... P0DV91 41277685
    1063393 9vhe:D (2.5) BS02 ATP N/A GO:0000731 ... P0DV91 41277685
    1063394 9vhe:E (2.5) BS01 dna N/A GO:0000731 ... P0DV91 41277685
    1063395 9vhe:E (2.5) BS02 ATP N/A GO:0000731 ... P0DV91 41277685
    1063396 9vhl:A (2.6) BS01 dna N/A GO:0003964 ... Q46666 41277685
    1063397 9vhl:A (2.6) BS02 rna N/A GO:0003964 ... Q46666 41277685
    1063398 9vhl:B (2.6) BS01 dna N/A GO:0000731 ... P0DV91 41277685
    1063399 9vhl:B (2.6) BS02 rna N/A GO:0000731 ... P0DV91 41277685
    1063400 9vhl:B (2.6) BS03 ATP N/A GO:0000731 ... P0DV91 41277685

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).