SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1064401 9w1c:D (1.92) BS03 A1MBA N/A GO:0005886 ... W8KQR0 41313718
    1064402 9w1c:D (1.92) BS04 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064403 9w1c:D (1.92) BS05 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064404 9w1c:E (1.92) BS01 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064405 9w1c:E (1.92) BS02 BCL N/A GO:0005886 ... W8KE12 41313718
    1064406 9w1c:E (1.92) BS03 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064407 9w1c:E (1.92) BS04 BCL N/A GO:0005886 ... W8KE12 41313718
    1064408 9w1c:E (1.92) BS05 BCL N/A GO:0005886 ... W8KE12 41313718
    1064409 9w1c:E (1.92) BS06 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064410 9w1c:G (1.92) BS01 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064411 9w1c:G (1.92) BS02 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064412 9w1c:G (1.92) BS03 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064413 9w1c:G (1.92) BS04 A1MBA N/A GO:0005886 ... W8KQR0 41313718
    1064414 9w1c:G (1.92) BS05 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064415 9w1c:H (1.92) BS01 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064416 9w1c:H (1.92) BS02 BCL N/A GO:0005886 ... W8KE12 41313718
    1064417 9w1c:H (1.92) BS03 BCL N/A GO:0005886 ... W8KE12 41313718
    1064418 9w1c:H (1.92) BS04 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064419 9w1c:H (1.92) BS05 BCL N/A GO:0005886 ... W8KE12 41313718
    1064420 9w1c:H (1.92) BS06 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064421 9w1c:J (1.92) BS01 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064422 9w1c:J (1.92) BS02 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064423 9w1c:J (1.92) BS03 A1MBA N/A GO:0005886 ... W8KQR0 41313718
    1064424 9w1c:J (1.92) BS04 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064425 9w1c:J (1.92) BS05 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064426 9w1c:K (1.92) BS01 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064427 9w1c:K (1.92) BS02 BCL N/A GO:0005886 ... W8KE12 41313718
    1064428 9w1c:K (1.92) BS03 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064429 9w1c:K (1.92) BS04 BCL N/A GO:0005886 ... W8KE12 41313718
    1064430 9w1c:K (1.92) BS05 BCL N/A GO:0005886 ... W8KE12 41313718
    1064431 9w1c:K (1.92) BS06 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064432 9w1c:M (1.92) BS01 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064433 9w1c:M (1.92) BS02 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064434 9w1c:M (1.92) BS03 A1MBA N/A GO:0005886 ... W8KQR0 41313718
    1064435 9w1c:M (1.92) BS04 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064436 9w1c:M (1.92) BS05 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064437 9w1c:N (1.92) BS01 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064438 9w1c:N (1.92) BS02 BCL N/A GO:0005886 ... W8KE12 41313718
    1064439 9w1c:N (1.92) BS03 BCL N/A GO:0005886 ... W8KE12 41313718
    1064440 9w1c:N (1.92) BS04 BCL N/A GO:0005886 ... W8KE12 41313718
    1064441 9w1c:N (1.92) BS05 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064442 9w1c:P (1.92) BS01 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064443 9w1c:P (1.92) BS02 A1MBA N/A GO:0005886 ... W8KQR0 41313718
    1064444 9w1c:P (1.92) BS03 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064445 9w1c:P (1.92) BS04 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064446 9w1c:P (1.92) BS05 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064447 9w1c:Q (1.92) BS01 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064448 9w1c:Q (1.92) BS02 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064449 9w1c:Q (1.92) BS03 BCL N/A GO:0005886 ... W8KE12 41313718
    1064450 9w1c:Q (1.92) BS04 BCL N/A GO:0005886 ... W8KE12 41313718
    1064451 9w1c:Q (1.92) BS05 BCL N/A GO:0005886 ... W8KE12 41313718
    1064452 9w1c:Q (1.92) BS06 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064453 9w1c:S (1.92) BS01 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064454 9w1c:S (1.92) BS02 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064455 9w1c:S (1.92) BS03 A1MBA N/A GO:0005886 ... W8KQR0 41313718
    1064456 9w1c:S (1.92) BS04 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064457 9w1c:S (1.92) BS05 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064458 9w1c:T (1.92) BS01 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064459 9w1c:T (1.92) BS02 BCL N/A GO:0005886 ... W8KE12 41313718
    1064460 9w1c:T (1.92) BS03 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064461 9w1c:T (1.92) BS04 BCL N/A GO:0005886 ... W8KE12 41313718
    1064462 9w1c:T (1.92) BS05 BCL N/A GO:0005886 ... W8KE12 41313718
    1064463 9w1c:T (1.92) BS06 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064464 9w1c:V (1.92) BS01 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064465 9w1c:V (1.92) BS02 A1MBA N/A GO:0005886 ... W8KQR0 41313718
    1064466 9w1c:V (1.92) BS03 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064467 9w1c:V (1.92) BS04 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064468 9w1c:V (1.92) BS05 BCL N/A GO:0005886 ... W8KQR0 41313718
    1064469 9w1c:W (1.92) BS01 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064470 9w1c:W (1.92) BS02 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064471 9w1c:W (1.92) BS03 A1MBA N/A GO:0005886 ... W8KE12 41313718
    1064472 9w1c:W (1.92) BS04 BCL N/A GO:0005886 ... W8KE12 41313718
    1064473 9w1c:W (1.92) BS05 BCL N/A GO:0005886 ... W8KE12 41313718
    1064474 9w1c:W (1.92) BS06 BCL N/A GO:0005886 ... W8KE12 41313718
    1064475 9w1k:A (2.9) BS01 FUC N/A N/A Q8T4S2 N/A
    1064476 9w1k:A (2.9) BS02 CA N/A N/A Q8T4S2 N/A
    1064477 9w1k:B (2.9) BS01 FUC N/A N/A Q8T4S2 N/A
    1064478 9w1k:B (2.9) BS02 CA N/A N/A Q8T4S2 N/A
    1064479 9w1k:C (2.9) BS01 CA N/A N/A Q8T4S2 N/A
    1064480 9w1k:D (2.9) BS01 FUC N/A N/A Q8T4S2 N/A
    1064481 9w1k:D (2.9) BS02 CA N/A N/A Q8T4S2 N/A
    1064482 9w1p:A (3.4) BS01 G6P N/A GO:0005515 ... O43826
    P0ABE7
    41225049
    1064483 9w1p:B (3.4) BS01 G6P N/A GO:0005515 ... O43826
    P0ABE7
    41225049
    1064484 9w1r:A (3.4) BS01 A1EUP N/A GO:0005515 ... O43826 41225049
    1064485 9w26:A (2.62) BS01 rna N/A N/A N/A N/A
    1064486 9w26:A (2.62) BS02 dna N/A N/A N/A N/A
    1064487 9w26:A (2.62) BS03 dna N/A N/A N/A N/A
    1064488 9w26:B (2.62) BS01 rna N/A N/A N/A N/A
    1064489 9w26:B (2.62) BS02 dna N/A N/A N/A N/A
    1064490 9w26:B (2.62) BS03 dna N/A N/A N/A N/A
    1064491 9w26:B (2.62) BS04 dna N/A N/A N/A N/A
    1064492 9w26:B (2.62) BS05 MG N/A N/A N/A N/A
    1064493 9w2c:A (3.39) BS01 FUC N/A N/A Q8T4S2 N/A
    1064494 9w2c:A (3.39) BS02 FUC N/A N/A Q8T4S2 N/A
    1064495 9w2c:A (3.39) BS03 CA N/A N/A Q8T4S2 N/A
    1064496 9w2c:A (3.39) BS04 CA N/A N/A Q8T4S2 N/A
    1064497 9w2c:A (3.39) BS05 LDP N/A N/A Q8T4S2 N/A
    1064498 9w2c:B (3.39) BS01 CA N/A N/A Q8T4S2 N/A
    1064499 9w2c:B (3.39) BS02 CA N/A N/A Q8T4S2 N/A
    1064500 9w2c:B (3.39) BS03 LDP N/A N/A Q8T4S2 N/A
    1064501 9w2c:C (3.39) BS01 CA N/A N/A Q8T4S2 N/A
    1064502 9w2c:C (3.39) BS02 CA N/A N/A Q8T4S2 N/A
    1064503 9w2c:C (3.39) BS03 LDP N/A N/A Q8T4S2 N/A
    1064504 9w2c:D (3.39) BS01 CA N/A N/A Q8T4S2 N/A
    1064505 9w2c:D (3.39) BS02 LDP N/A N/A Q8T4S2 N/A
    1064506 9w2k:A (1.798) BS01 rna N/A GO:0000213 ... C7DIA5 40884401
    1064507 9w2k:A (1.798) BS02 rna N/A GO:0000213 ... C7DIA5 40884401
    1064508 9w2k:A (1.798) BS03 A23 N/A GO:0000213 ... C7DIA5 40884401
    1064509 9w2k:B (1.798) BS01 rna N/A GO:0000213 ... C7DIA5 40884401
    1064510 9w2k:B (1.798) BS02 rna N/A GO:0000213 ... C7DIA5 40884401
    1064511 9w2m:A (4.2) BS01 ADP N/A N/A N/A N/A
    1064512 9w2m:C (4.2) BS01 ADP N/A N/A N/A N/A
    1064513 9w2m:F (4.2) BS01 ADP N/A N/A N/A N/A
    1064514 9w2m:L (4.2) BS01 GDP N/A N/A N/A N/A
    1064515 9w2m:M (4.2) BS01 GDP N/A N/A N/A N/A
    1064516 9w2m:a (4.2) BS01 ADP N/A N/A N/A N/A
    1064517 9w2m:c (4.2) BS01 ADP N/A N/A N/A N/A
    1064518 9w2m:f (4.2) BS01 ADP N/A N/A N/A N/A
    1064519 9w2m:l (4.2) BS01 GDP N/A N/A N/A N/A
    1064520 9w2m:m (4.2) BS01 GDP N/A N/A N/A N/A
    1064521 9w32:A (2.59) BS01 A1EVP N/A N/A P0ABE7
    P35346
    41417603
    1064522 9w32:B (2.59) BS01 A1EVP N/A N/A P0ABE7
    P35346
    41417603
    1064523 9w33:A (2.69) BS01 A1EVQ N/A N/A P0ABE7
    P35346
    41417603
    1064524 9w33:B (2.69) BS01 A1EVQ N/A N/A P0ABE7
    P35346
    41417603
    1064525 9w3v:A (2.53) BS01 rna N/A N/A N/A N/A
    1064526 9w3v:B (2.53) BS01 rna N/A N/A N/A N/A
    1064527 9w3v:C (2.53) BS01 rna N/A N/A N/A N/A
    1064528 9w3v:D (2.53) BS01 rna N/A N/A N/A N/A
    1064529 9w3w:A (2.67) BS01 rna N/A N/A N/A N/A
    1064530 9w3w:B (2.67) BS01 rna N/A N/A N/A N/A
    1064531 9w3w:C (2.67) BS01 rna N/A N/A N/A N/A
    1064532 9w3w:D (2.67) BS01 rna N/A N/A N/A N/A
    1064533 9w44:A (2.37) BS01 SIA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    1064534 9w44:A (2.37) BS02 BMA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    1064535 9w44:B (2.37) BS01 SIA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    1064536 9w44:B (2.37) BS02 BMA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    1064537 9w44:C (2.37) BS01 SIA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    1064538 9w44:C (2.37) BS02 BMA N/A GO:0019031 ... A0A2P1GNQ1 N/A
    1064539 9w45:R (3.2) BS01 A1MBB N/A N/A N/A N/A
    1064540 9w47:A (1.79) BS01 UDP N/A N/A Q6UW63 N/A
    1064541 9w49:R (2.9) BS01 A1LWX N/A N/A P41145 41152269
    1064542 9w4f:A (2.26) BS01 BGC N/A GO:0004553 ... N/A 41043783
    1064543 9w4f:B (2.26) BS01 BGC N/A GO:0004553 ... N/A 41043783
    1064544 9w4f:C (2.26) BS01 BGC N/A GO:0004553 ... N/A 41043783
    1064545 9w4f:D (2.26) BS01 BGC N/A GO:0004553 ... N/A 41043783
    1064546 9w4f:E (2.26) BS01 BGC N/A GO:0004553 ... N/A 41043783
    1064547 9w4f:F (2.26) BS01 BGC N/A GO:0004553 ... N/A 41043783
    1064548 9w4f:G (2.26) BS01 BGC N/A GO:0004553 ... N/A 41043783
    1064549 9w4f:H (2.26) BS01 BGC N/A GO:0004553 ... N/A 41043783
    1064550 9w4f:I (2.26) BS01 BGC N/A GO:0004553 ... N/A 41043783
    1064551 9w4f:J (2.26) BS01 BGC N/A GO:0004553 ... N/A 41043783
    1064552 9w4m:A (2.7) BS01 A1D6R N/A GO:0001774 ... O35433 N/A
    1064553 9w4m:B (2.7) BS01 A1D6R N/A GO:0001774 ... O35433 N/A
    1064554 9w4m:C (2.7) BS01 A1D6R N/A GO:0001774 ... O35433 N/A
    1064555 9w4m:D (2.7) BS01 A1D6R N/A GO:0001774 ... O35433 N/A
    1064556 9w4n:A (3.25) BS01 ZEI N/A GO:0001774 ... O35433 N/A
    1064557 9w4n:B (3.25) BS01 ZEI N/A GO:0001774 ... O35433 N/A
    1064558 9w4n:C (3.25) BS01 ZEI N/A GO:0001774 ... O35433 N/A
    1064559 9w4n:D (3.25) BS01 ZEI N/A GO:0001774 ... O35433 N/A
    1064560 9w4r:A (3.78) BS01 rna N/A N/A Q5TAX3 41521656
    1064561 9w4r:A (3.78) BS02 ZN N/A N/A Q5TAX3 41521656
    1064562 9w4r:A (3.78) BS03 ZN N/A N/A Q5TAX3 41521656
    1064563 9w4r:B (3.78) BS01 rna N/A GO:0000932 ... Q9H9Z2 41521656
    1064564 9w4r:B (3.78) BS02 ZN N/A GO:0000932 ... Q9H9Z2 41521656
    1064565 9w4r:B (3.78) BS03 ZN N/A GO:0000932 ... Q9H9Z2 41521656
    1064566 9w4s:A (3.82) BS01 rna N/A N/A Q5TAX3 41521656
    1064567 9w4s:A (3.82) BS02 ZN N/A N/A Q5TAX3 41521656
    1064568 9w4s:B (3.82) BS01 rna N/A GO:0000932 ... Q9H9Z2 41521656
    1064569 9w4s:B (3.82) BS02 ZN N/A GO:0000932 ... Q9H9Z2 41521656
    1064570 9w4s:B (3.82) BS03 ZN N/A GO:0000932 ... Q9H9Z2 41521656
    1064571 9w4t:A (2.87) BS01 A1D6W N/A GO:0001774 ... O35433 N/A
    1064572 9w4t:A (2.87) BS02 A1D6W N/A GO:0001774 ... O35433 N/A
    1064573 9w4t:B (2.87) BS01 A1D6W N/A GO:0001774 ... O35433 N/A
    1064574 9w4t:B (2.87) BS02 A1D6W N/A GO:0001774 ... O35433 N/A
    1064575 9w4t:C (2.87) BS01 A1D6W N/A GO:0001774 ... O35433 N/A
    1064576 9w4t:C (2.87) BS02 A1D6W N/A GO:0001774 ... O35433 N/A
    1064577 9w4t:D (2.87) BS01 A1D6W N/A GO:0001774 ... O35433 N/A
    1064578 9w4t:D (2.87) BS02 A1D6W N/A GO:0001774 ... O35433 N/A
    1064579 9w4v:A (2.3) BS01 28J N/A N/A O57880 N/A
    1064580 9w4v:B (2.3) BS01 28J N/A N/A O57880 N/A
    1064581 9w4w:A (1.39) BS01 ILE N/A N/A O57880 N/A
    1064582 9w54:A (2.55) BS01 FAD N/A N/A Q8L3C7 41432352
    1064583 9w54:A (2.55) BS02 GLU N/A N/A Q8L3C7 41432352
    1064584 9w54:C (2.55) BS01 FAD N/A N/A Q8L3C7 41432352
    1064585 9w54:C (2.55) BS02 GLU N/A N/A Q8L3C7 41432352
    1064586 9w55:A (2.43) BS01 FAD N/A N/A Q8L3C7 41432352
    1064587 9w55:B (2.43) BS01 FAD N/A N/A Q8L3C7 41432352
    1064588 9w55:C (2.43) BS01 FAD N/A N/A Q8L3C7 41432352
    1064589 9w56:A (2.38) BS01 FAD N/A N/A Q8L3C7 41432352
    1064590 9w56:A (2.38) BS02 GLU N/A N/A Q8L3C7 41432352
    1064591 9w56:B (2.38) BS01 FAD N/A N/A Q8L3C7 41432352
    1064592 9w56:C (2.38) BS01 FAD N/A N/A Q8L3C7 41432352
    1064593 9w56:C (2.38) BS02 GLU N/A N/A Q8L3C7 41432352
    1064594 9w56:D (2.38) BS01 FAD N/A N/A Q8L3C7 41432352
    1064595 9w56:D (2.38) BS02 GLU N/A N/A Q8L3C7 41432352
    1064596 9w56:F (2.38) BS01 FAD N/A N/A Q8L3C7 41432352
    1064597 9w56:F (2.38) BS02 GLU N/A N/A Q8L3C7 41432352
    1064598 9w56:G (2.38) BS01 FAD N/A N/A Q8L3C7 41432352
    1064599 9w56:G (2.38) BS02 GLU N/A N/A Q8L3C7 41432352
    1064600 9w56:I (2.38) BS01 FAD N/A N/A Q8L3C7 41432352

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).