SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1064601 9w56:I (2.38) BS02 GLU N/A N/A Q8L3C7 41432352
    1064602 9w56:J (2.38) BS01 FAD N/A N/A Q8L3C7 41432352
    1064603 9w56:J (2.38) BS02 GLU N/A N/A Q8L3C7 41432352
    1064604 9w56:K (2.38) BS01 FAD N/A N/A Q8L3C7 41432352
    1064605 9w56:L (2.38) BS01 FAD N/A N/A Q8L3C7 41432352
    1064606 9w56:L (2.38) BS02 GLU N/A N/A Q8L3C7 41432352
    1064607 9w57:A (3.27) BS01 FAD N/A N/A Q8L3C7 41432352
    1064608 9w57:B (3.27) BS01 FAD N/A N/A Q8L3C7 41432352
    1064609 9w57:C (3.27) BS01 FAD N/A N/A Q8L3C7 41432352
    1064610 9w57:D (3.27) BS01 FAD N/A N/A Q8L3C7 41432352
    1064611 9w57:E (3.27) BS01 FAD N/A N/A Q8L3C7 41432352
    1064612 9w57:F (3.27) BS01 FAD N/A N/A Q8L3C7 41432352
    1064613 9w58:A (1.85) BS01 FAD N/A N/A Q8L3C7 41432352
    1064614 9w58:B (1.85) BS01 FAD N/A N/A Q8L3C7 41432352
    1064615 9w58:C (1.85) BS01 FAD N/A N/A Q8L3C7 41432352
    1064616 9w58:D (1.85) BS01 FAD N/A N/A Q8L3C7 41432352
    1064617 9w58:F (1.85) BS01 FAD N/A N/A Q8L3C7 41432352
    1064618 9w5c:A (2.1) BS01 peptide N/A N/A N/A N/A
    1064619 9w5c:A (2.1) BS02 peptide N/A N/A N/A N/A
    1064620 9w5c:A (2.1) BS03 peptide N/A N/A N/A N/A
    1064621 9w5c:C (2.1) BS01 peptide N/A N/A N/A N/A
    1064622 9w5c:E (2.1) BS01 peptide N/A N/A N/A N/A
    1064623 9w5c:G (2.1) BS01 peptide N/A N/A N/A N/A
    1064624 9w5c:I (2.1) BS01 peptide N/A N/A N/A N/A
    1064625 9w5c:K (2.1) BS01 peptide N/A N/A N/A N/A
    1064626 9w5c:K (2.1) BS02 peptide N/A N/A N/A N/A
    1064627 9w5w:A (2.3) BS01 NAD N/A N/A N/A 41495901
    1064628 9w5w:A (2.3) BS02 NAD N/A N/A N/A 41495901
    1064629 9w5w:B (2.3) BS01 NAD N/A N/A N/A 41495901
    1064630 9w5w:B (2.3) BS02 NAD N/A N/A N/A 41495901
    1064631 9w5w:C (2.3) BS01 NAD N/A N/A N/A 41495901
    1064632 9w5w:C (2.3) BS02 NAD N/A N/A N/A 41495901
    1064633 9w5w:D (2.3) BS01 NAD N/A N/A N/A 41495901
    1064634 9w5w:D (2.3) BS02 NAD N/A N/A N/A 41495901
    1064635 9w5x:A (2.4) BS01 NCA N/A GO:0003824 ... A0A972GQ63 41495901
    1064636 9w5x:B (2.4) BS01 NCA N/A GO:0003824 ... A0A972GQ63 41495901
    1064637 9w5x:C (2.4) BS01 NCA N/A GO:0003824 ... A0A972GQ63 41495901
    1064638 9w5x:C (2.4) BS02 NCA N/A GO:0003824 ... A0A972GQ63 41495901
    1064639 9w5x:D (2.4) BS01 NCA N/A GO:0003824 ... A0A972GQ63 41495901
    1064640 9w5x:D (2.4) BS02 NCA N/A GO:0003824 ... A0A972GQ63 41495901
    1064641 9w61:A (2.34) BS01 FAD N/A GO:0003995 ... D4JZK0 N/A
    1064642 9w61:A (2.34) BS02 FAD N/A GO:0003995 ... D4JZK0 N/A
    1064643 9w61:B (2.34) BS01 FAD N/A GO:0003995 ... D4JZK0 N/A
    1064644 9w61:B (2.34) BS02 FAD N/A GO:0003995 ... D4JZK0 N/A
    1064645 9w61:C (2.34) BS01 FAD N/A GO:0003995 ... D4JZK0 N/A
    1064646 9w61:C (2.34) BS02 FAD N/A GO:0003995 ... D4JZK0 N/A
    1064647 9w61:D (2.34) BS01 FAD N/A GO:0003995 ... D4JZK0 N/A
    1064648 9w61:D (2.34) BS02 FAD N/A GO:0003995 ... D4JZK0 N/A
    1064649 9w6v:A (3.2) BS01 NAP N/A N/A P28845 41106252
    1064650 9w6v:A (3.2) BS02 A1MBC N/A N/A P28845 41106252
    1064651 9w6v:B (3.2) BS01 NAP N/A N/A P28845 41106252
    1064652 9w6v:B (3.2) BS02 A1MBC N/A N/A P28845 41106252
    1064653 9w6v:C (3.2) BS01 NAP N/A N/A P28845 41106252
    1064654 9w6v:C (3.2) BS02 A1MBC N/A N/A P28845 41106252
    1064655 9w6v:D (3.2) BS01 NAP N/A N/A P28845 41106252
    1064656 9w6v:D (3.2) BS02 A1MBC N/A N/A P28845 41106252
    1064657 9w6v:E (3.2) BS01 NAP N/A N/A P28845 41106252
    1064658 9w6v:E (3.2) BS02 A1MBC N/A N/A P28845 41106252
    1064659 9w6v:F (3.2) BS01 NAP N/A N/A P28845 41106252
    1064660 9w6v:F (3.2) BS02 A1MBC N/A N/A P28845 41106252
    1064661 9w6v:G (3.2) BS01 NAP N/A N/A P28845 41106252
    1064662 9w6v:G (3.2) BS02 A1MBC N/A N/A P28845 41106252
    1064663 9w6v:H (3.2) BS01 NAP N/A N/A P28845 41106252
    1064664 9w6v:H (3.2) BS02 A1MBC N/A N/A P28845 41106252
    1064665 9w6v:I (3.2) BS01 NAP N/A N/A P28845 41106252
    1064666 9w6v:I (3.2) BS02 A1MBC N/A N/A P28845 41106252
    1064667 9w6v:J (3.2) BS01 NAP N/A N/A P28845 41106252
    1064668 9w6v:J (3.2) BS02 A1MBC N/A N/A P28845 41106252
    1064669 9w6v:K (3.2) BS01 NAP N/A N/A P28845 41106252
    1064670 9w6v:K (3.2) BS02 A1MBC N/A N/A P28845 41106252
    1064671 9w6w:R (3.13) BS01 8K3 N/A GO:0001586 ... P0ABE7
    P47898
    41222804
    1064672 9w74:A (4.94) BS01 dna N/A GO:0000786 ... P84233 41541688
    1064673 9w74:A (4.94) BS02 dna N/A GO:0000786 ... P84233 41541688
    1064674 9w74:B (4.94) BS01 dna N/A GO:0000786 ... P62799 41541688
    1064675 9w74:B (4.94) BS02 dna N/A GO:0000786 ... P62799 41541688
    1064676 9w74:C (4.94) BS01 dna N/A GO:0000786 ... P06897 41541688
    1064677 9w74:C (4.94) BS02 dna N/A GO:0000786 ... P06897 41541688
    1064678 9w74:D (4.94) BS01 dna N/A GO:0000786 ... P02281 41541688
    1064679 9w74:D (4.94) BS02 dna N/A GO:0000786 ... P02281 41541688
    1064680 9w74:E (4.94) BS01 dna N/A GO:0000786 ... P84233 41541688
    1064681 9w74:E (4.94) BS02 dna N/A GO:0000786 ... P84233 41541688
    1064682 9w74:F (4.94) BS01 dna N/A GO:0000786 ... P62799 41541688
    1064683 9w74:F (4.94) BS02 dna N/A GO:0000786 ... P62799 41541688
    1064684 9w74:K (4.94) BS01 dna N/A GO:0000786 ... P84233 41541688
    1064685 9w74:K (4.94) BS02 dna N/A GO:0000786 ... P84233 41541688
    1064686 9w74:L (4.94) BS01 dna N/A GO:0000786 ... P62799 41541688
    1064687 9w74:L (4.94) BS02 dna N/A GO:0000786 ... P62799 41541688
    1064688 9w74:M (4.94) BS01 dna N/A GO:0000786 ... P06897 41541688
    1064689 9w74:M (4.94) BS02 dna N/A GO:0000786 ... P06897 41541688
    1064690 9w74:N (4.94) BS01 dna N/A GO:0000786 ... P02281 41541688
    1064691 9w74:N (4.94) BS02 dna N/A GO:0000786 ... P02281 41541688
    1064692 9w74:O (4.94) BS01 dna N/A GO:0000786 ... P84233 41541688
    1064693 9w74:O (4.94) BS02 dna N/A GO:0000786 ... P84233 41541688
    1064694 9w74:P (4.94) BS01 dna N/A GO:0000786 ... P62799 41541688
    1064695 9w74:P (4.94) BS02 dna N/A GO:0000786 ... P62799 41541688
    1064696 9w75:A (2.13) BS01 BLA N/A GO:0016020 ... N/A N/A
    1064697 9w75:A (2.13) BS02 EIC N/A GO:0016020 ... N/A N/A
    1064698 9w75:B (2.13) BS01 BLA N/A GO:0016020 ... N/A N/A
    1064699 9w75:B (2.13) BS02 EIC N/A GO:0016020 ... N/A N/A
    1064700 9w75:C (2.13) BS01 EIC N/A GO:0016020 ... N/A N/A
    1064701 9w75:C (2.13) BS02 EIC N/A GO:0016020 ... N/A N/A
    1064702 9w75:C (2.13) BS03 BLA N/A GO:0016020 ... N/A N/A
    1064703 9w76:A (2.3) BS01 BLA N/A GO:0016020 ... N/A N/A
    1064704 9w76:B (2.3) BS01 BLA N/A GO:0016020 ... N/A N/A
    1064705 9w76:C (2.3) BS01 BLA N/A GO:0016020 ... N/A N/A
    1064706 9w7f:A (2.59) BS01 SAM N/A GO:0006370 ... A0A2X0RUW3 N/A
    1064707 9w7f:B (2.59) BS01 SAM N/A GO:0006370 ... A0A2X0RUW3 N/A
    1064708 9w7g:A (2.88) BS01 SFG N/A GO:0006370 ... A0A2X0RUW3 N/A
    1064709 9w7g:B (2.88) BS01 SFG N/A GO:0006370 ... A0A2X0RUW3 N/A
    1064710 9w7n:A (2.0) BS01 4D6 N/A GO:0008800 ... P52682 41217385
    1064711 9w7n:B (2.0) BS01 4D6 N/A GO:0008800 ... P52682 41217385
    1064712 9w7o:A (1.93) BS01 KJK N/A GO:0008800 ... P52682 41217385
    1064713 9w7o:B (1.93) BS01 KJK N/A GO:0008800 ... P52682 41217385
    1064714 9w7p:A (2.2) BS01 A1MBD N/A GO:0008800 ... P52682 41217385
    1064715 9w7p:B (2.2) BS01 A1MBD N/A GO:0008800 ... P52682 41217385
    1064716 9w7q:A (3.79) BS01 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064717 9w7q:A (3.79) BS02 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064718 9w7q:A (3.79) BS03 rna N/A GO:0003677 ... Q99ZW2 N/A
    1064719 9w7s:A (2.3) BS01 dna N/A N/A O00712 41428734
    1064720 9w7s:A (2.3) BS02 dna N/A N/A O00712 41428734
    1064721 9w7s:A (2.3) BS03 ZN N/A N/A O00712 41428734
    1064722 9w7t:A (3.91) BS01 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064723 9w7t:A (3.91) BS02 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064724 9w7t:A (3.91) BS03 rna N/A GO:0003677 ... Q99ZW2 N/A
    1064725 9w7u:A (3.83) BS01 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064726 9w7u:A (3.83) BS02 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064727 9w7u:A (3.83) BS03 rna N/A GO:0003677 ... Q99ZW2 N/A
    1064728 9w7v:A (3.81) BS01 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064729 9w7v:A (3.81) BS02 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064730 9w7v:A (3.81) BS03 rna N/A GO:0003677 ... Q99ZW2 N/A
    1064731 9w7w:A (2.81) BS01 dna N/A N/A O00712 41428734
    1064732 9w7w:A (2.81) BS02 dna N/A N/A O00712 41428734
    1064733 9w7w:A (2.81) BS03 ZN N/A N/A O00712 41428734
    1064734 9w7w:B (2.81) BS01 dna N/A N/A O00712 41428734
    1064735 9w7w:B (2.81) BS02 dna N/A N/A O00712 41428734
    1064736 9w7w:B (2.81) BS03 ZN N/A N/A O00712 41428734
    1064737 9w8g:A (3.5) BS01 FE N/A GO:0005506 ... P72360 40846682
    1064738 9w8g:A (3.5) BS02 FE N/A GO:0005506 ... P72360 40846682
    1064739 9w8g:B (3.5) BS01 FE N/A GO:0005506 ... P72360 40846682
    1064740 9w8g:B (3.5) BS02 FE N/A GO:0005506 ... P72360 40846682
    1064741 9w8g:B (3.5) BS03 O N/A GO:0005506 ... P72360 40846682
    1064742 9w96:A (2.5) BS01 GRA N/A GO:0004315 ... Q7CTU0 41183203
    1064743 9w96:B (2.5) BS01 GRA N/A GO:0004315 ... Q7CTU0 41183203
    1064744 9w96:C (2.5) BS01 GRA N/A GO:0004315 ... Q7CTU0 41183203
    1064745 9w96:D (2.5) BS01 GRA N/A GO:0004315 ... Q7CTU0 41183203
    1064746 9w9d:A (4.4) BS01 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064747 9w9d:A (4.4) BS02 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064748 9w9d:A (4.4) BS03 rna N/A GO:0003677 ... Q99ZW2 N/A
    1064749 9wa7:A (2.31) BS01 dna N/A N/A Q14938 41623611
    1064750 9wa7:A (2.31) BS02 dna N/A N/A Q14938 41623611
    1064751 9wa7:A (2.31) BS03 ZN N/A N/A Q14938 41623611
    1064752 9wa9:A (4.12) BS01 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064753 9wa9:A (4.12) BS02 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064754 9wa9:A (4.12) BS03 rna N/A GO:0003677 ... Q99ZW2 N/A
    1064755 9waa:A (4.17) BS01 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064756 9waa:A (4.17) BS02 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064757 9waa:A (4.17) BS03 rna N/A GO:0003677 ... Q99ZW2 N/A
    1064758 9wah:I (2.43) BS01 peptide N/A N/A P03300 41735326
    1064759 9wah:J (2.43) BS01 peptide N/A N/A P03300 41735326
    1064760 9wai:C (2.6) BS01 peptide N/A N/A N/A 41735326
    1064761 9wai:D (2.6) BS01 peptide N/A N/A N/A 41735326
    1064762 9wat:A (2.1) BS01 HEM N/A N/A N/A 41372208
    1064763 9waw:A (3.95) BS01 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064764 9waw:A (3.95) BS02 dna N/A GO:0003677 ... Q99ZW2 N/A
    1064765 9waw:A (3.95) BS03 rna N/A GO:0003677 ... Q99ZW2 N/A
    1064766 9wb3:A (3.17) BS01 rna N/A N/A P03303 N/A
    1064767 9wb4:A (3.32) BS01 rna N/A N/A P03303 N/A
    1064768 9wbd:A (2.75) BS01 peptide N/A N/A A0A0B4J276
    P01848
    41372155
    1064769 9wbd:B (2.75) BS01 peptide N/A N/A N/A 41372155
    1064770 9wbd:C (2.75) BS01 peptide N/A N/A P01889 41372155
    1064771 9wbd:F (2.75) BS01 peptide N/A N/A A0A0B4J276
    P01848
    41372155
    1064772 9wbd:G (2.75) BS01 peptide N/A N/A N/A 41372155
    1064773 9wbd:H (2.75) BS01 peptide N/A N/A P01889 41372155
    1064774 9wbd:K (2.75) BS01 peptide N/A N/A A0A0B4J276
    P01848
    41372155
    1064775 9wbd:L (2.75) BS01 peptide N/A N/A N/A 41372155
    1064776 9wbd:M (2.75) BS01 peptide N/A N/A P01889 41372155
    1064777 9wbd:P (2.75) BS01 peptide N/A N/A A0A0B4J276
    P01848
    41372155
    1064778 9wbd:Q (2.75) BS01 peptide N/A N/A N/A 41372155
    1064779 9wbd:R (2.75) BS01 peptide N/A N/A P01889 41372155
    1064780 9wbt:A (3.2) BS01 MG N/A GO:0000287 ... P0A6F5 N/A
    1064781 9wbt:E (3.2) BS01 MG N/A GO:0000287 ... P0A6F5 N/A
    1064782 9wbt:F (3.2) BS01 MG N/A GO:0000287 ... P0A6F5 N/A
    1064783 9wbt:G (3.2) BS01 MG N/A GO:0000287 ... P0A6F5 N/A
    1064784 9wbt:H (3.2) BS01 MG N/A GO:0000287 ... P0A6F5 N/A
    1064785 9wbt:N (3.2) BS01 MG N/A GO:0000287 ... P0A6F5 N/A
    1064786 9wbz:A (2.9) BS01 dna N/A GO:0000122 ... P51532 41402274
    1064787 9wbz:A (2.9) BS02 dna N/A GO:0000122 ... P51532 41402274
    1064788 9wbz:B (2.9) BS01 dna N/A GO:0000786 ... P62799 41402274
    1064789 9wbz:B (2.9) BS02 dna N/A GO:0000786 ... P62799 41402274
    1064790 9wbz:C (2.9) BS01 dna N/A GO:0000786 ... Q6AZJ8 41402274
    1064791 9wbz:C (2.9) BS02 dna N/A GO:0000786 ... Q6AZJ8 41402274
    1064792 9wbz:D (2.9) BS01 dna N/A GO:0000786 ... P02281 41402274
    1064793 9wbz:D (2.9) BS02 dna N/A GO:0000786 ... P02281 41402274
    1064794 9wbz:E (2.9) BS01 dna N/A GO:0000786 ... P84233 41402274
    1064795 9wbz:E (2.9) BS02 dna N/A GO:0000786 ... P84233 41402274
    1064796 9wbz:F (2.9) BS01 dna N/A GO:0000786 ... P62799 41402274
    1064797 9wbz:F (2.9) BS02 dna N/A GO:0000786 ... P62799 41402274
    1064798 9wbz:G (2.9) BS01 dna N/A GO:0000786 ... Q6AZJ8 41402274
    1064799 9wbz:G (2.9) BS02 dna N/A GO:0000786 ... Q6AZJ8 41402274
    1064800 9wbz:H (2.9) BS01 dna N/A GO:0000786 ... P02281 41402274

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).