SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1065201 9wnr:P (2.76) BS01 rna N/A GO:0000028 ... P0A7T3 41099701
    1065202 9wnr:Q (2.76) BS01 rna N/A GO:0000028 ... P0AG63 41099701
    1065203 9wnr:R (2.76) BS01 rna N/A GO:0002181 ... P0A7T7 41099701
    1065204 9wnr:S (2.76) BS01 rna N/A GO:0002181 ... P0A7U3 41099701
    1065205 9wnr:T (2.76) BS01 rna N/A GO:0000028 ... P0A7U7 41099701
    1065206 9wnr:U (2.76) BS01 rna N/A GO:0000028 ... P68679 41099701
    1065207 9wnr:V (2.76) BS01 rna N/A GO:0003755 ... P0A850 41099701
    1065208 9wnr:c (2.76) BS01 rna N/A GO:0000027 ... P60422 41099701
    1065209 9wnr:d (2.76) BS01 rna N/A GO:0003735 ... C3SQU2 41099701
    1065210 9wnr:e (2.76) BS01 rna N/A GO:0001070 ... P60723 41099701
    1065211 9wnr:f (2.76) BS01 rna N/A GO:0000027 ... P62399 41099701
    1065212 9wnr:f (2.76) BS02 rna N/A GO:0000027 ... P62399 41099701
    1065213 9wnr:f (2.76) BS03 rna N/A GO:0000027 ... P62399 41099701
    1065214 9wnr:g (2.76) BS01 rna N/A GO:0000027 ... P0AG55 41099701
    1065215 9wnr:h (2.76) BS01 rna N/A GO:0002181 ... P0A7R1 41099701
    1065216 9wnr:k (2.76) BS01 rna N/A GO:0002181 ... P0AA10 41099701
    1065217 9wnr:l (2.76) BS01 rna N/A GO:0002181 ... P0ADY3 41099701
    1065218 9wnr:l (2.76) BS02 rna N/A GO:0002181 ... P0ADY3 41099701
    1065219 9wnr:m (2.76) BS01 rna N/A GO:0002181 ... P02413 41099701
    1065220 9wnr:n (2.76) BS01 rna N/A GO:0000027 ... P0ADY7 41099701
    1065221 9wnr:o (2.76) BS01 rna N/A GO:0000027 ... P0AG44 41099701
    1065222 9wnr:p (2.76) BS01 rna N/A GO:0002181 ... P0C018 41099701
    1065223 9wnr:p (2.76) BS02 rna N/A GO:0002181 ... P0C018 41099701
    1065224 9wnr:q (2.76) BS01 rna N/A GO:0000027 ... P0A7K6 41099701
    1065225 9wnr:q (2.76) BS02 rna N/A GO:0000027 ... P0A7K6 41099701
    1065226 9wnr:r (2.76) BS01 rna N/A GO:0000027 ... P0A7L3 41099701
    1065227 9wnr:s (2.76) BS01 rna N/A GO:0002181 ... P0AG48 41099701
    1065228 9wnr:t (2.76) BS01 rna N/A GO:0002181 ... P61175 41099701
    1065229 9wnr:u (2.76) BS01 rna N/A GO:0000027 ... P0ADZ0 41099701
    1065230 9wnr:v (2.76) BS01 rna N/A GO:0000027 ... P60624 41099701
    1065231 9wnr:w (2.76) BS01 rna N/A GO:0000027 ... P68919 41099701
    1065232 9wnr:y (2.76) BS01 rna N/A GO:0000027 ... P0A7L8 41099701
    1065233 9wnr:y (2.76) BS02 rna N/A GO:0000027 ... P0A7L8 41099701
    1065234 9wnr:y (2.76) BS03 rna N/A GO:0000027 ... P0A7L8 41099701
    1065235 9wnr:z (2.76) BS01 rna N/A N/A N/A 41099701
    1065236 9wnr:z (2.76) BS02 PRO N/A N/A N/A 41099701
    1065237 9wp3:A (2.50184) BS01 ZN N/A N/A O00408 41151129
    1065238 9wp3:A (2.50184) BS02 MG N/A N/A O00408 41151129
    1065239 9wp3:A (2.50184) BS03 A1E46 N/A N/A O00408 41151129
    1065240 9wp3:B (2.50184) BS01 ZN N/A N/A O00408 41151129
    1065241 9wp3:B (2.50184) BS02 A1E46 N/A N/A O00408 41151129
    1065242 9wp3:C (2.50184) BS01 ZN N/A N/A O00408 41151129
    1065243 9wp3:C (2.50184) BS02 A1E46 N/A N/A O00408 41151129
    1065244 9wp3:D (2.50184) BS01 ZN N/A N/A O00408 41151129
    1065245 9wp3:D (2.50184) BS02 A1E46 N/A N/A O00408 41151129
    1065246 9wp5:A (2.1) BS01 ZN N/A N/A Q08499 41453305
    1065247 9wp5:A (2.1) BS02 A1EYL N/A N/A Q08499 41453305
    1065248 9wp5:B (2.1) BS01 ZN N/A N/A Q08499 41453305
    1065249 9wp5:B (2.1) BS02 A1EYL N/A N/A Q08499 41453305
    1065250 9wp9:R (3.25) BS01 S1P N/A N/A Q99500 41252158
    1065251 9wqv:0 (1.81) BS01 BCL N/A N/A N/A 41772109
    1065252 9wqv:0 (1.81) BS02 BCL N/A N/A N/A 41772109
    1065253 9wqv:0 (1.81) BS03 SPO N/A N/A N/A 41772109
    1065254 9wqv:0 (1.81) BS04 A1EYK N/A N/A N/A 41772109
    1065255 9wqv:1 (1.81) BS01 BCL N/A N/A N/A 41772109
    1065256 9wqv:1 (1.81) BS02 BCL N/A N/A N/A 41772109
    1065257 9wqv:2 (1.81) BS01 BCL N/A N/A N/A 41772109
    1065258 9wqv:2 (1.81) BS02 BCL N/A N/A N/A 41772109
    1065259 9wqv:3 (1.81) BS01 BCL N/A N/A N/A 41772109
    1065260 9wqv:3 (1.81) BS02 SPO N/A N/A N/A 41772109
    1065261 9wqv:3 (1.81) BS03 BCL N/A N/A N/A 41772109
    1065262 9wqv:3 (1.81) BS04 SPO N/A N/A N/A 41772109
    1065263 9wqv:4 (1.81) BS01 BCL N/A N/A N/A 41772109
    1065264 9wqv:4 (1.81) BS02 SPO N/A N/A N/A 41772109
    1065265 9wqv:4 (1.81) BS03 BCL N/A N/A N/A 41772109
    1065266 9wqv:5 (1.81) BS01 BCL N/A N/A N/A 41772109
    1065267 9wqv:5 (1.81) BS02 SPO N/A N/A N/A 41772109
    1065268 9wqv:5 (1.81) BS03 BCL N/A N/A N/A 41772109
    1065269 9wqv:5 (1.81) BS04 BCL N/A N/A N/A 41772109
    1065270 9wqv:5 (1.81) BS05 SPO N/A N/A N/A 41772109
    1065271 9wqv:6 (1.81) BS01 BCL N/A N/A N/A 41772109
    1065272 9wqv:6 (1.81) BS02 SPO N/A N/A N/A 41772109
    1065273 9wqv:6 (1.81) BS03 A1EYK N/A N/A N/A 41772109
    1065274 9wqv:6 (1.81) BS04 BCL N/A N/A N/A 41772109
    1065275 9wqv:7 (1.81) BS01 SPO N/A N/A N/A 41772109
    1065276 9wqv:7 (1.81) BS02 BCL N/A N/A N/A 41772109
    1065277 9wqv:7 (1.81) BS03 SPO N/A N/A N/A 41772109
    1065278 9wqv:7 (1.81) BS04 BCL N/A N/A N/A 41772109
    1065279 9wqv:7 (1.81) BS05 BCL N/A N/A N/A 41772109
    1065280 9wqv:7 (1.81) BS06 SPO N/A N/A N/A 41772109
    1065281 9wqv:8 (1.81) BS01 BCL N/A N/A N/A 41772109
    1065282 9wqv:8 (1.81) BS02 SPO N/A N/A N/A 41772109
    1065283 9wqv:8 (1.81) BS03 A1EYK N/A N/A N/A 41772109
    1065284 9wqv:8 (1.81) BS04 BCL N/A N/A N/A 41772109
    1065285 9wqv:9 (1.81) BS01 BCL N/A N/A N/A 41772109
    1065286 9wqv:9 (1.81) BS02 SPO N/A N/A N/A 41772109
    1065287 9wqv:9 (1.81) BS03 BCL N/A N/A N/A 41772109
    1065288 9wqv:9 (1.81) BS04 SPO N/A N/A N/A 41772109
    1065289 9wqv:9 (1.81) BS05 A1EYK N/A N/A N/A 41772109
    1065290 9wqv:9 (1.81) BS06 BCL N/A N/A N/A 41772109
    1065291 9wqv:9 (1.81) BS07 SPO N/A N/A N/A 41772109
    1065292 9wqv:A (1.81) BS01 SPO N/A N/A N/A 41772109
    1065293 9wqv:A (1.81) BS02 BCL N/A N/A N/A 41772109
    1065294 9wqv:A (1.81) BS03 SPO N/A N/A N/A 41772109
    1065295 9wqv:A (1.81) BS04 A1EYK N/A N/A N/A 41772109
    1065296 9wqv:A (1.81) BS05 BCL N/A N/A N/A 41772109
    1065297 9wqv:A (1.81) BS06 BCL N/A N/A N/A 41772109
    1065298 9wqv:A (1.81) BS07 SPO N/A N/A N/A 41772109
    1065299 9wqv:B (1.81) BS01 BCL N/A N/A N/A 41772109
    1065300 9wqv:B (1.81) BS02 SPO N/A N/A N/A 41772109
    1065301 9wqv:B (1.81) BS03 A1EYK N/A N/A N/A 41772109
    1065302 9wqv:B (1.81) BS04 BCL N/A N/A N/A 41772109
    1065303 9wqv:C (1.81) BS01 HEC N/A N/A N/A 41772109
    1065304 9wqv:C (1.81) BS02 HEC N/A N/A N/A 41772109
    1065305 9wqv:C (1.81) BS03 HEC N/A N/A N/A 41772109
    1065306 9wqv:C (1.81) BS04 MG N/A N/A N/A 41772109
    1065307 9wqv:C (1.81) BS05 MG N/A N/A N/A 41772109
    1065308 9wqv:D (1.81) BS01 SPO N/A N/A N/A 41772109
    1065309 9wqv:D (1.81) BS02 BCL N/A N/A N/A 41772109
    1065310 9wqv:D (1.81) BS03 SPO N/A N/A N/A 41772109
    1065311 9wqv:D (1.81) BS04 A1EYK N/A N/A N/A 41772109
    1065312 9wqv:D (1.81) BS05 BCL N/A N/A N/A 41772109
    1065313 9wqv:D (1.81) BS06 BCL N/A N/A N/A 41772109
    1065314 9wqv:D (1.81) BS07 SPO N/A N/A N/A 41772109
    1065315 9wqv:E (1.81) BS01 BCL N/A N/A N/A 41772109
    1065316 9wqv:E (1.81) BS02 SPO N/A N/A N/A 41772109
    1065317 9wqv:E (1.81) BS03 A1EYK N/A N/A N/A 41772109
    1065318 9wqv:E (1.81) BS04 BCL N/A N/A N/A 41772109
    1065319 9wqv:F (1.81) BS01 SPO N/A N/A N/A 41772109
    1065320 9wqv:F (1.81) BS02 BCL N/A N/A N/A 41772109
    1065321 9wqv:F (1.81) BS03 SPO N/A N/A N/A 41772109
    1065322 9wqv:F (1.81) BS04 A1EYK N/A N/A N/A 41772109
    1065323 9wqv:F (1.81) BS05 BCL N/A N/A N/A 41772109
    1065324 9wqv:F (1.81) BS06 BCL N/A N/A N/A 41772109
    1065325 9wqv:F (1.81) BS07 SPO N/A N/A N/A 41772109
    1065326 9wqv:G (1.81) BS01 BCL N/A N/A N/A 41772109
    1065327 9wqv:G (1.81) BS02 SPO N/A N/A N/A 41772109
    1065328 9wqv:G (1.81) BS03 BCL N/A N/A N/A 41772109
    1065329 9wqv:I (1.81) BS01 SPO N/A N/A N/A 41772109
    1065330 9wqv:I (1.81) BS02 BCL N/A N/A N/A 41772109
    1065331 9wqv:I (1.81) BS03 SPO N/A N/A N/A 41772109
    1065332 9wqv:I (1.81) BS04 BCL N/A N/A N/A 41772109
    1065333 9wqv:I (1.81) BS05 BCL N/A N/A N/A 41772109
    1065334 9wqv:I (1.81) BS06 SPO N/A N/A N/A 41772109
    1065335 9wqv:J (1.81) BS01 BCL N/A N/A N/A 41772109
    1065336 9wqv:J (1.81) BS02 SPO N/A N/A N/A 41772109
    1065337 9wqv:J (1.81) BS03 A1EYK N/A N/A N/A 41772109
    1065338 9wqv:J (1.81) BS04 BCL N/A N/A N/A 41772109
    1065339 9wqv:K (1.81) BS01 SPO N/A N/A N/A 41772109
    1065340 9wqv:K (1.81) BS02 BCL N/A N/A N/A 41772109
    1065341 9wqv:K (1.81) BS03 SPO N/A N/A N/A 41772109
    1065342 9wqv:K (1.81) BS04 BCL N/A N/A N/A 41772109
    1065343 9wqv:K (1.81) BS05 BCL N/A N/A N/A 41772109
    1065344 9wqv:K (1.81) BS06 SPO N/A N/A N/A 41772109
    1065345 9wqv:L (1.81) BS01 BCL N/A N/A N/A 41772109
    1065346 9wqv:L (1.81) BS02 BPH N/A N/A N/A 41772109
    1065347 9wqv:L (1.81) BS03 U10 N/A N/A N/A 41772109
    1065348 9wqv:L (1.81) BS04 BCL N/A N/A N/A 41772109
    1065349 9wqv:L (1.81) BS05 BCL N/A N/A N/A 41772109
    1065350 9wqv:L (1.81) BS06 FE N/A N/A N/A 41772109
    1065351 9wqv:L (1.81) BS07 U10 N/A N/A N/A 41772109
    1065352 9wqv:L (1.81) BS08 BPH N/A N/A N/A 41772109
    1065353 9wqv:L (1.81) BS09 U10 N/A N/A N/A 41772109
    1065354 9wqv:M (1.81) BS01 BPH N/A N/A N/A 41772109
    1065355 9wqv:M (1.81) BS02 U10 N/A N/A N/A 41772109
    1065356 9wqv:M (1.81) BS03 BCL N/A N/A N/A 41772109
    1065357 9wqv:M (1.81) BS04 BCL N/A N/A N/A 41772109
    1065358 9wqv:M (1.81) BS05 FE N/A N/A N/A 41772109
    1065359 9wqv:M (1.81) BS06 U10 N/A N/A N/A 41772109
    1065360 9wqv:M (1.81) BS07 BCL N/A N/A N/A 41772109
    1065361 9wqv:M (1.81) BS08 BPH N/A N/A N/A 41772109
    1065362 9wqv:M (1.81) BS09 U10 N/A N/A N/A 41772109
    1065363 9wqv:M (1.81) BS10 SPO N/A N/A N/A 41772109
    1065364 9wqv:M (1.81) BS11 MG N/A N/A N/A 41772109
    1065365 9wqv:N (1.81) BS01 BCL N/A N/A N/A 41772109
    1065366 9wqv:N (1.81) BS02 SPO N/A N/A N/A 41772109
    1065367 9wqv:N (1.81) BS03 A1EYK N/A N/A N/A 41772109
    1065368 9wqv:N (1.81) BS04 BCL N/A N/A N/A 41772109
    1065369 9wqv:O (1.81) BS01 SPO N/A N/A N/A 41772109
    1065370 9wqv:O (1.81) BS02 BCL N/A N/A N/A 41772109
    1065371 9wqv:O (1.81) BS03 SPO N/A N/A N/A 41772109
    1065372 9wqv:O (1.81) BS04 A1EYK N/A N/A N/A 41772109
    1065373 9wqv:O (1.81) BS05 BCL N/A N/A N/A 41772109
    1065374 9wqv:O (1.81) BS06 BCL N/A N/A N/A 41772109
    1065375 9wqv:O (1.81) BS07 SPO N/A N/A N/A 41772109
    1065376 9wqv:P (1.81) BS01 BCL N/A N/A N/A 41772109
    1065377 9wqv:P (1.81) BS02 SPO N/A N/A N/A 41772109
    1065378 9wqv:P (1.81) BS03 BCL N/A N/A N/A 41772109
    1065379 9wqv:Q (1.81) BS01 SPO N/A N/A N/A 41772109
    1065380 9wqv:Q (1.81) BS02 BCL N/A N/A N/A 41772109
    1065381 9wqv:Q (1.81) BS03 SPO N/A N/A N/A 41772109
    1065382 9wqv:Q (1.81) BS04 BCL N/A N/A N/A 41772109
    1065383 9wqv:Q (1.81) BS05 BCL N/A N/A N/A 41772109
    1065384 9wqv:Q (1.81) BS06 SPO N/A N/A N/A 41772109
    1065385 9wqv:R (1.81) BS01 BCL N/A N/A N/A 41772109
    1065386 9wqv:R (1.81) BS02 SPO N/A N/A N/A 41772109
    1065387 9wqv:R (1.81) BS03 A1EYK N/A N/A N/A 41772109
    1065388 9wqv:R (1.81) BS04 BCL N/A N/A N/A 41772109
    1065389 9wqv:S (1.81) BS01 SPO N/A N/A N/A 41772109
    1065390 9wqv:S (1.81) BS02 BCL N/A N/A N/A 41772109
    1065391 9wqv:S (1.81) BS03 SPO N/A N/A N/A 41772109
    1065392 9wqv:S (1.81) BS04 BCL N/A N/A N/A 41772109
    1065393 9wqv:S (1.81) BS05 BCL N/A N/A N/A 41772109
    1065394 9wqv:S (1.81) BS06 SPO N/A N/A N/A 41772109
    1065395 9wqv:T (1.81) BS01 BCL N/A N/A N/A 41772109
    1065396 9wqv:T (1.81) BS02 SPO N/A N/A N/A 41772109
    1065397 9wqv:T (1.81) BS03 A1EYK N/A N/A N/A 41772109
    1065398 9wqv:T (1.81) BS04 BCL N/A N/A N/A 41772109
    1065399 9wqv:U (1.81) BS01 SPO N/A N/A N/A 41772109
    1065400 9wqv:U (1.81) BS02 BCL N/A N/A N/A 41772109

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).