SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1065401 9wqv:U (1.81) BS03 SPO N/A N/A N/A 41772109
    1065402 9wqv:U (1.81) BS04 SPO N/A N/A N/A 41772109
    1065403 9wqv:U (1.81) BS05 BCL N/A N/A N/A 41772109
    1065404 9wqv:U (1.81) BS06 BCL N/A N/A N/A 41772109
    1065405 9wqv:V (1.81) BS01 BCL N/A N/A N/A 41772109
    1065406 9wqv:V (1.81) BS02 SPO N/A N/A N/A 41772109
    1065407 9wqv:V (1.81) BS03 A1EYK N/A N/A N/A 41772109
    1065408 9wqv:V (1.81) BS04 BCL N/A N/A N/A 41772109
    1065409 9wqv:W (1.81) BS01 SPO N/A N/A N/A 41772109
    1065410 9wqv:W (1.81) BS02 SPO N/A N/A N/A 41772109
    1065411 9wqv:W (1.81) BS03 BCL N/A N/A N/A 41772109
    1065412 9wqv:W (1.81) BS04 BCL N/A N/A N/A 41772109
    1065413 9wqv:W (1.81) BS05 BCL N/A N/A N/A 41772109
    1065414 9wqv:W (1.81) BS06 SPO N/A N/A N/A 41772109
    1065415 9wqv:X (1.81) BS01 SPO N/A N/A N/A 41772109
    1065416 9wqv:X (1.81) BS02 BCL N/A N/A N/A 41772109
    1065417 9wqv:X (1.81) BS03 A1EYK N/A N/A N/A 41772109
    1065418 9wqv:X (1.81) BS04 BCL N/A N/A N/A 41772109
    1065419 9wqv:Y (1.81) BS01 SPO N/A N/A N/A 41772109
    1065420 9wqv:Y (1.81) BS02 BCL N/A N/A N/A 41772109
    1065421 9wqv:Y (1.81) BS03 SPO N/A N/A N/A 41772109
    1065422 9wqv:Y (1.81) BS04 BCL N/A N/A N/A 41772109
    1065423 9wqv:Z (1.81) BS01 BCL N/A N/A N/A 41772109
    1065424 9wqv:Z (1.81) BS02 SPO N/A N/A N/A 41772109
    1065425 9wqv:Z (1.81) BS03 A1EYK N/A N/A N/A 41772109
    1065426 9wqv:Z (1.81) BS04 BCL N/A N/A N/A 41772109
    1065427 9wqz:A (2.16) BS01 PDD N/A N/A N/A 41759851
    1065428 9wr1:A (2.4) BS01 PP3 N/A N/A N/A 41759851
    1065429 9wr1:A (2.4) BS02 PP3 N/A N/A N/A 41759851
    1065430 9wr1:B (2.4) BS01 PP3 N/A N/A N/A 41759851
    1065431 9wr1:B (2.4) BS02 PP3 N/A N/A N/A 41759851
    1065432 9wr1:C (2.4) BS01 PP3 N/A N/A N/A 41759851
    1065433 9wr1:C (2.4) BS02 PP3 N/A N/A N/A 41759851
    1065434 9wr1:D (2.4) BS01 PP3 N/A N/A N/A 41759851
    1065435 9wr1:D (2.4) BS02 PP3 N/A N/A N/A 41759851
    1065436 9wrf:A (2.87) BS01 7VO N/A N/A N/A 41759851
    1065437 9wrf:A (2.87) BS02 7VO N/A N/A N/A 41759851
    1065438 9wrf:B (2.87) BS01 7VO N/A N/A N/A 41759851
    1065439 9wrf:B (2.87) BS02 7VO N/A N/A N/A 41759851
    1065440 9wrg:A (2.68) BS01 ILP N/A N/A N/A 41759851
    1065441 9wrg:A (2.68) BS02 ILP N/A N/A N/A 41759851
    1065442 9wrg:B (2.68) BS01 ILP N/A N/A N/A 41759851
    1065443 9wrg:B (2.68) BS02 ILP N/A N/A N/A 41759851
    1065444 9wri:A (1.85) BS01 peptide N/A N/A P56545 41419197
    1065445 9wri:A (1.85) BS02 NAD N/A N/A P56545 41419197
    1065446 9wri:B (1.85) BS01 NAD N/A N/A P56545 41419197
    1065447 9wrj:A (2.2) BS01 peptide N/A N/A Q13363 41547303
    1065448 9wrj:A (2.2) BS02 NAD N/A N/A Q13363 41547303
    1065449 9ws0:A (3.27) BS01 dna N/A N/A N/A 41761907
    1065450 9ws0:B (3.27) BS01 dna N/A N/A N/A 41761907
    1065451 9ws0:H (3.27) BS01 dna N/A N/A N/A 41761907
    1065452 9ws0:L (3.27) BS01 dna N/A N/A N/A 41761907
    1065453 9wsc:A (1.698) BS01 MG N/A GO:0005576 ... A0A2R2Z574 N/A
    1065454 9wsl:R (3.27) BS01 CA N/A N/A P98155 N/A
    1065455 9wsl:R (3.27) BS02 CA N/A N/A P98155 N/A
    1065456 9wsl:S (3.27) BS01 CA N/A N/A P98155 N/A
    1065457 9wsl:S (3.27) BS02 CA N/A N/A P98155 N/A
    1065458 9wsl:T (3.27) BS01 CA N/A N/A P98155 N/A
    1065459 9wsl:T (3.27) BS02 CA N/A N/A P98155 N/A
    1065460 9wsm:C (3.4) BS01 dna N/A N/A N/A 41521663
    1065461 9wsm:C (3.4) BS02 dna N/A N/A N/A 41521663
    1065462 9wsm:D (3.4) BS01 dna N/A N/A N/A 41521663
    1065463 9wsm:D (3.4) BS02 dna N/A N/A N/A 41521663
    1065464 9wsm:D (3.4) BS03 MG N/A N/A N/A 41521663
    1065465 9wsm:D (3.4) BS04 ZN N/A N/A N/A 41521663
    1065466 9wsm:D (3.4) BS05 ZN N/A N/A N/A 41521663
    1065467 9wsm:F (3.4) BS01 dna N/A N/A N/A 41521663
    1065468 9wsm:F (3.4) BS02 dna N/A N/A N/A 41521663
    1065469 9wst:R (2.8) BS01 peptide N/A GO:0001965 ... P35372 41199005
    1065470 9wsv:R (2.8) BS01 peptide N/A N/A P30518
    P42866
    41199005
    1065471 9wsw:R (2.8) BS01 peptide N/A N/A P30518
    P42866
    41199005
    1065472 9wsx:R (2.8) BS01 peptide N/A N/A P30518
    P42866
    41199005
    1065473 9wu1:A (2.1) BS01 A1MB8 N/A N/A N/A 41759851
    1065474 9wu1:A (2.1) BS02 A1MB8 N/A N/A N/A 41759851
    1065475 9wu1:B (2.1) BS01 A1MB8 N/A N/A N/A 41759851
    1065476 9wu1:B (2.1) BS02 A1MB8 N/A N/A N/A 41759851
    1065477 9wu2:A (2.35) BS01 dna N/A N/A N/A 41761907
    1065478 9wu2:B (2.35) BS01 dna N/A N/A N/A 41761907
    1065479 9wu2:B (2.35) BS02 dna N/A N/A N/A 41761907
    1065480 9wu2:C (2.35) BS01 dna N/A N/A N/A 41761907
    1065481 9wu2:D (2.35) BS01 dna N/A N/A N/A 41761907
    1065482 9wu2:D (2.35) BS02 dna N/A N/A N/A 41761907
    1065483 9wu2:G (2.35) BS01 dna N/A N/A N/A 41761907
    1065484 9wu2:H (2.35) BS01 dna N/A N/A N/A 41761907
    1065485 9wu2:H (2.35) BS02 dna N/A N/A N/A 41761907
    1065486 9wu2:I (2.35) BS01 dna N/A N/A N/A 41761907
    1065487 9wu2:J (2.35) BS01 dna N/A N/A N/A 41761907
    1065488 9wu2:J (2.35) BS02 dna N/A N/A N/A 41761907
    1065489 9wu2:M (2.35) BS01 dna N/A N/A N/A 41761907
    1065490 9wu2:N (2.35) BS01 dna N/A N/A N/A 41761907
    1065491 9wu2:N (2.35) BS02 dna N/A N/A N/A 41761907
    1065492 9wu2:O (2.35) BS01 dna N/A N/A N/A 41761907
    1065493 9wu2:P (2.35) BS01 dna N/A N/A N/A 41761907
    1065494 9wu2:P (2.35) BS02 dna N/A N/A N/A 41761907
    1065495 9wv4:A (2.29) BS01 ZN N/A N/A Q9ULU4 N/A
    1065496 9wv4:A (2.29) BS02 ZN N/A N/A Q9ULU4 N/A
    1065497 9wv4:B (2.29) BS01 ZN N/A N/A Q9ULU4 N/A
    1065498 9wv4:B (2.29) BS02 ZN N/A N/A Q9ULU4 N/A
    1065499 9wv4:C (2.29) BS01 ZN N/A N/A Q9ULU4 N/A
    1065500 9wv4:C (2.29) BS02 ZN N/A N/A Q9ULU4 N/A
    1065501 9wv4:D (2.29) BS01 ZN N/A N/A Q9ULU4 N/A
    1065502 9wv4:D (2.29) BS02 ZN N/A N/A Q9ULU4 N/A
    1065503 9wve:A (2.8) BS01 peptide N/A N/A P04439 41339521
    1065504 9wve:D (2.8) BS01 peptide N/A N/A P04439 41339521
    1065505 9wve:G (2.8) BS01 peptide N/A N/A P04439 41339521
    1065506 9wve:J (2.8) BS01 peptide N/A N/A P04439 41339521
    1065507 9wvf:A (2.8) BS01 peptide N/A N/A P04439 41339521
    1065508 9wvf:D (2.8) BS01 peptide N/A N/A P04439 41339521
    1065509 9wvf:G (2.8) BS01 peptide N/A N/A P04439 41339521
    1065510 9wvf:J (2.8) BS01 peptide N/A N/A P04439 41339521
    1065511 9wvu:AAA (2.7) BS01 GLC N/A N/A N/A N/A
    1065512 9wvu:AAA (2.7) BS02 GLC N/A N/A N/A N/A
    1065513 9wvu:AAA (2.7) BS03 GLC N/A N/A N/A N/A
    1065514 9wvu:AAA (2.7) BS04 GLC N/A N/A N/A N/A
    1065515 9wvu:AAA (2.7) BS05 GLC N/A N/A N/A N/A
    1065516 9wvu:AAA (2.7) BS06 GLC N/A N/A N/A N/A
    1065517 9wvu:AAA (2.7) BS07 GLC N/A N/A N/A N/A
    1065518 9wvu:AAA (2.7) BS08 GLC N/A N/A N/A N/A
    1065519 9wvu:AAA (2.7) BS09 GLC N/A N/A N/A N/A
    1065520 9wvu:BBB (2.7) BS01 GLC N/A N/A N/A N/A
    1065521 9wvu:BBB (2.7) BS02 GLC N/A N/A N/A N/A
    1065522 9wvu:BBB (2.7) BS03 GLC N/A N/A N/A N/A
    1065523 9wvu:BBB (2.7) BS04 GLC N/A N/A N/A N/A
    1065524 9wvu:BBB (2.7) BS05 GLC N/A N/A N/A N/A
    1065525 9wvu:BBB (2.7) BS06 GLC N/A N/A N/A N/A
    1065526 9wvu:BBB (2.7) BS07 GLC N/A N/A N/A N/A
    1065527 9wvu:BBB (2.7) BS08 GLC N/A N/A N/A N/A
    1065528 9wvu:BBB (2.7) BS09 GLC N/A N/A N/A N/A
    1065529 9wvu:BBB (2.7) BS10 GLC N/A N/A N/A N/A
    1065530 9wwe:A (1.75) BS01 ZN N/A N/A O60704 N/A
    1065531 9wwe:A (1.75) BS02 ZN N/A N/A O60704 N/A
    1065532 9wwe:A (1.75) BS03 A3P N/A N/A O60704 N/A
    1065533 9wwf:A (2.0) BS01 MN N/A N/A O60704 N/A
    1065534 9wwf:A (2.0) BS02 MN N/A N/A O60704 N/A
    1065535 9wwf:A (2.0) BS03 MN N/A N/A O60704 N/A
    1065536 9wwf:A (2.0) BS04 A3P N/A N/A O60704 N/A
    1065537 9wxm:R (3.3) BS01 peptide N/A GO:0001525 ... P49685 41321630
    1065538 9wxs:C (1.56) BS01 AG N/A GO:0003824 ... P61889 41104151
    1065539 9wxs:D (1.56) BS01 AG N/A GO:0003824 ... P61889 41104151
    1065540 9wxv:A (4.4) BS01 CLR N/A GO:0005227 ... O94886 41617699
    1065541 9wxv:A (4.4) BS02 CLR N/A GO:0005227 ... O94886 41617699
    1065542 9wy1:A (3.23) BS01 AV0 N/A GO:0000148 ... P38631 41639077
    1065543 9wy1:A (3.23) BS02 AV0 N/A GO:0000148 ... P38631 41639077
    1065544 9wy1:A (3.23) BS03 ERG N/A GO:0000148 ... P38631 41639077
    1065545 9wy1:A (3.23) BS04 ERG N/A GO:0000148 ... P38631 41639077
    1065546 9wy1:A (3.23) BS05 ERG N/A GO:0000148 ... P38631 41639077
    1065547 9wy1:A (3.23) BS06 ERG N/A GO:0000148 ... P38631 41639077
    1065548 9wy1:A (3.23) BS07 ERG N/A GO:0000148 ... P38631 41639077
    1065549 9wy1:A (3.23) BS08 ERG N/A GO:0000148 ... P38631 41639077
    1065550 9wy1:A (3.23) BS09 ERG N/A GO:0000148 ... P38631 41639077
    1065551 9wy1:A (3.23) BS10 ERG N/A GO:0000148 ... P38631 41639077
    1065552 9wy1:A (3.23) BS11 ERG N/A GO:0000148 ... P38631 41639077
    1065553 9wy1:A (3.23) BS12 ERG N/A GO:0000148 ... P38631 41639077
    1065554 9wyf:A (2.05) BS01 MG N/A N/A A0A169T193 41575888
    1065555 9wyp:1 (2.25) BS01 CLA N/A N/A N/A 41420767
    1065556 9wyp:1 (2.25) BS02 CLA N/A N/A N/A 41420767
    1065557 9wyp:1 (2.25) BS03 CLA N/A N/A N/A 41420767
    1065558 9wyp:1 (2.25) BS04 CLA N/A N/A N/A 41420767
    1065559 9wyp:1 (2.25) BS05 CLA N/A N/A N/A 41420767
    1065560 9wyp:1 (2.25) BS06 CLA N/A N/A N/A 41420767
    1065561 9wyp:1 (2.25) BS07 CLA N/A N/A N/A 41420767
    1065562 9wyp:1 (2.25) BS08 CLA N/A N/A N/A 41420767
    1065563 9wyp:1 (2.25) BS09 CLA N/A N/A N/A 41420767
    1065564 9wyp:1 (2.25) BS10 KC2 N/A N/A N/A 41420767
    1065565 9wyp:1 (2.25) BS11 CLA N/A N/A N/A 41420767
    1065566 9wyp:1 (2.25) BS12 CLA N/A N/A N/A 41420767
    1065567 9wyp:1 (2.25) BS13 CLA N/A N/A N/A 41420767
    1065568 9wyp:1 (2.25) BS14 II0 N/A N/A N/A 41420767
    1065569 9wyp:1 (2.25) BS15 II3 N/A N/A N/A 41420767
    1065570 9wyp:1 (2.25) BS16 II0 N/A N/A N/A 41420767
    1065571 9wyp:1 (2.25) BS17 II0 N/A N/A N/A 41420767
    1065572 9wyp:1 (2.25) BS18 IHT N/A N/A N/A 41420767
    1065573 9wyp:1 (2.25) BS19 CLA N/A N/A N/A 41420767
    1065574 9wyp:2 (2.25) BS01 II0 N/A N/A N/A 41420767
    1065575 9wyp:2 (2.25) BS02 CLA N/A N/A N/A 41420767
    1065576 9wyp:2 (2.25) BS03 CLA N/A N/A N/A 41420767
    1065577 9wyp:2 (2.25) BS04 CLA N/A N/A N/A 41420767
    1065578 9wyp:2 (2.25) BS05 CLA N/A N/A N/A 41420767
    1065579 9wyp:2 (2.25) BS06 CLA N/A N/A N/A 41420767
    1065580 9wyp:2 (2.25) BS07 CLA N/A N/A N/A 41420767
    1065581 9wyp:2 (2.25) BS08 CLA N/A N/A N/A 41420767
    1065582 9wyp:2 (2.25) BS09 CLA N/A N/A N/A 41420767
    1065583 9wyp:2 (2.25) BS10 CLA N/A N/A N/A 41420767
    1065584 9wyp:2 (2.25) BS11 KC2 N/A N/A N/A 41420767
    1065585 9wyp:2 (2.25) BS12 CLA N/A N/A N/A 41420767
    1065586 9wyp:2 (2.25) BS13 CLA N/A N/A N/A 41420767
    1065587 9wyp:2 (2.25) BS14 II0 N/A N/A N/A 41420767
    1065588 9wyp:2 (2.25) BS15 II0 N/A N/A N/A 41420767
    1065589 9wyp:2 (2.25) BS16 IHT N/A N/A N/A 41420767
    1065590 9wyp:2 (2.25) BS17 II0 N/A N/A N/A 41420767
    1065591 9wyp:2 (2.25) BS18 II0 N/A N/A N/A 41420767
    1065592 9wyp:3 (2.25) BS01 CLA N/A N/A N/A 41420767
    1065593 9wyp:3 (2.25) BS02 CLA N/A N/A N/A 41420767
    1065594 9wyp:3 (2.25) BS03 CLA N/A N/A N/A 41420767
    1065595 9wyp:3 (2.25) BS04 CLA N/A N/A N/A 41420767
    1065596 9wyp:3 (2.25) BS05 CLA N/A N/A N/A 41420767
    1065597 9wyp:3 (2.25) BS06 CLA N/A N/A N/A 41420767
    1065598 9wyp:3 (2.25) BS07 KC2 N/A N/A N/A 41420767
    1065599 9wyp:3 (2.25) BS08 CLA N/A N/A N/A 41420767
    1065600 9wyp:3 (2.25) BS09 CLA N/A N/A N/A 41420767

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).