SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1066001 9wyp:e (2.25) BS01 CLA N/A N/A N/A 41420767
    1066002 9wyp:e (2.25) BS02 CLA N/A N/A N/A 41420767
    1066003 9wyp:e (2.25) BS03 CLA N/A N/A N/A 41420767
    1066004 9wyp:e (2.25) BS04 CLA N/A N/A N/A 41420767
    1066005 9wyp:e (2.25) BS05 KC2 N/A N/A N/A 41420767
    1066006 9wyp:e (2.25) BS06 CLA N/A N/A N/A 41420767
    1066007 9wyp:e (2.25) BS07 CLA N/A N/A N/A 41420767
    1066008 9wyp:e (2.25) BS08 CLA N/A N/A N/A 41420767
    1066009 9wyp:e (2.25) BS09 KC2 N/A N/A N/A 41420767
    1066010 9wyp:e (2.25) BS10 CLA N/A N/A N/A 41420767
    1066011 9wyp:e (2.25) BS11 CLA N/A N/A N/A 41420767
    1066012 9wyp:e (2.25) BS12 II0 N/A N/A N/A 41420767
    1066013 9wyp:e (2.25) BS13 II3 N/A N/A N/A 41420767
    1066014 9wyp:e (2.25) BS14 II0 N/A N/A N/A 41420767
    1066015 9wyp:e (2.25) BS15 II0 N/A N/A N/A 41420767
    1066016 9wyp:e (2.25) BS16 8CT N/A N/A N/A 41420767
    1066017 9wyr:A (2.552) BS01 ATP N/A N/A A0A0P0XII1 41403133
    1066018 9wyr:A (2.552) BS02 MG N/A N/A A0A0P0XII1 41403133
    1066019 9wyr:B (2.552) BS01 ATP N/A N/A A0A0P0XII1 41403133
    1066020 9wys:A (2.79) BS01 ADP N/A N/A A0A0P0XII1 41403133
    1066021 9wys:A (2.79) BS02 MG N/A N/A A0A0P0XII1 41403133
    1066022 9wys:B (2.79) BS01 ADP N/A N/A A0A0P0XII1 41403133
    1066023 9wys:B (2.79) BS02 MG N/A N/A A0A0P0XII1 41403133
    1066024 9wzs:A (3.32) BS01 ERG N/A N/A N/A 41639077
    1066025 9wzs:A (3.32) BS02 ERG N/A N/A N/A 41639077
    1066026 9wzs:A (3.32) BS03 ERG N/A N/A N/A 41639077
    1066027 9wzs:A (3.32) BS04 ERG N/A N/A N/A 41639077
    1066028 9wzs:A (3.32) BS05 ERG N/A N/A N/A 41639077
    1066029 9wzs:A (3.32) BS06 A1E06 N/A N/A N/A 41639077
    1066030 9wzt:A (3.64) BS01 AV0 N/A N/A N/A 41639077
    1066031 9wzt:A (3.64) BS02 AV0 N/A N/A N/A 41639077
    1066032 9wzt:A (3.64) BS03 ERG N/A N/A N/A 41639077
    1066033 9wzt:A (3.64) BS04 ERG N/A N/A N/A 41639077
    1066034 9wzt:A (3.64) BS05 ERG N/A N/A N/A 41639077
    1066035 9wzt:A (3.64) BS06 ERG N/A N/A N/A 41639077
    1066036 9wzu:A (2.97) BS01 ERG N/A GO:0000148 ... P38631 41639077
    1066037 9wzu:A (2.97) BS02 ERG N/A GO:0000148 ... P38631 41639077
    1066038 9wzu:A (2.97) BS03 ERG N/A GO:0000148 ... P38631 41639077
    1066039 9wzu:A (2.97) BS04 ERG N/A GO:0000148 ... P38631 41639077
    1066040 9wzu:A (2.97) BS05 ERG N/A GO:0000148 ... P38631 41639077
    1066041 9wzu:A (2.97) BS06 A1E06 N/A GO:0000148 ... P38631 41639077
    1066042 9wzu:A (2.97) BS07 ERG N/A GO:0000148 ... P38631 41639077
    1066043 9wzu:A (2.97) BS08 ERG N/A GO:0000148 ... P38631 41639077
    1066044 9wzv:A (3.35) BS01 A1E06 N/A GO:0000148 ... P38631 41639077
    1066045 9wzv:A (3.35) BS02 ERG N/A GO:0000148 ... P38631 41639077
    1066046 9wzv:A (3.35) BS03 ERG N/A GO:0000148 ... P38631 41639077
    1066047 9wzv:A (3.35) BS04 ERG N/A GO:0000148 ... P38631 41639077
    1066048 9wzv:A (3.35) BS05 ERG N/A GO:0000148 ... P38631 41639077
    1066049 9wzv:A (3.35) BS06 ERG N/A GO:0000148 ... P38631 41639077
    1066050 9wzv:A (3.35) BS07 ERG N/A GO:0000148 ... P38631 41639077
    1066051 9x04:A (3.41) BS01 ERG N/A N/A N/A 41639077
    1066052 9x04:A (3.41) BS02 ERG N/A N/A N/A 41639077
    1066053 9x04:A (3.41) BS03 ERG N/A N/A N/A 41639077
    1066054 9x04:A (3.41) BS04 ERG N/A N/A N/A 41639077
    1066055 9x04:A (3.41) BS05 ERG N/A N/A N/A 41639077
    1066056 9x04:A (3.41) BS06 ERG N/A N/A N/A 41639077
    1066057 9x04:A (3.41) BS07 ERG N/A N/A N/A 41639077
    1066058 9x04:A (3.41) BS08 ERG N/A N/A N/A 41639077
    1066059 9x04:A (3.41) BS09 ERG N/A N/A N/A 41639077
    1066060 9x04:A (3.41) BS10 A1E06 N/A N/A N/A 41639077
    1066061 9x07:A (2.3) BS01 HEM N/A GO:0003009 ... P68082 N/A
    1066062 9x0i:A (1.7) BS01 OAA N/A GO:0005739 ... Q9SJH7 41580056
    1066063 9x0i:A (1.7) BS02 COA N/A GO:0005739 ... Q9SJH7 41580056
    1066064 9x0i:A (1.7) BS03 MG N/A GO:0005739 ... Q9SJH7 41580056
    1066065 9x0i:A (1.7) BS04 MG N/A GO:0005739 ... Q9SJH7 41580056
    1066066 9x0i:B (1.7) BS01 OAA N/A GO:0005739 ... Q9SJH7 41580056
    1066067 9x0i:B (1.7) BS02 COA N/A GO:0005739 ... Q9SJH7 41580056
    1066068 9x0i:B (1.7) BS03 MG N/A GO:0005739 ... Q9SJH7 41580056
    1066069 9x1h:A (2.6) BS01 CA N/A N/A P09871 41205294
    1066070 9x1h:A (2.6) BS02 CA N/A N/A P09871 41205294
    1066071 9x1h:B (2.6) BS01 CA N/A N/A P09871 41205294
    1066072 9x1h:B (2.6) BS02 CA N/A N/A P09871 41205294
    1066073 9x1l:A (2.8) BS01 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066074 9x1l:B (2.8) BS01 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066075 9x1l:C (2.8) BS01 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066076 9x1l:D (2.8) BS01 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066077 9x1l:E (2.8) BS01 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066078 9x1l:F (2.8) BS01 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066079 9x1m:A (2.3) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066080 9x1m:A (2.3) BS02 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066081 9x1m:A (2.3) BS03 MN N/A GO:0043138 ... Q5JHP7 N/A
    1066082 9x1m:B (2.3) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066083 9x1m:B (2.3) BS02 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066084 9x1m:B (2.3) BS03 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066085 9x1m:B (2.3) BS04 MN N/A GO:0043138 ... Q5JHP7 N/A
    1066086 9x1m:C (2.3) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066087 9x1m:C (2.3) BS02 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066088 9x1m:C (2.3) BS03 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066089 9x1m:C (2.3) BS04 MN N/A GO:0043138 ... Q5JHP7 N/A
    1066090 9x1m:D (2.3) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066091 9x1m:D (2.3) BS02 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066092 9x1m:E (2.3) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066093 9x1m:E (2.3) BS02 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066094 9x1m:F (2.3) BS01 ANP N/A GO:0043138 ... Q5JHP7 N/A
    1066095 9x1m:F (2.3) BS02 MN N/A GO:0043138 ... Q5JHP7 N/A
    1066096 9x1m:G (2.3) BS01 MN N/A N/A Q5JHL5 N/A
    1066097 9x1m:H (2.3) BS01 MN N/A N/A Q5JHL5 N/A
    1066098 9x1n:A (3.1) BS01 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066099 9x1n:A (3.1) BS02 MN N/A GO:0043138 ... Q5JHP7 N/A
    1066100 9x1n:B (3.1) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066101 9x1n:B (3.1) BS02 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066102 9x1n:B (3.1) BS03 MN N/A GO:0043138 ... Q5JHP7 N/A
    1066103 9x1n:C (3.1) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066104 9x1n:C (3.1) BS02 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066105 9x1n:C (3.1) BS03 MN N/A GO:0043138 ... Q5JHP7 N/A
    1066106 9x1n:D (3.1) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066107 9x1n:D (3.1) BS02 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066108 9x1n:D (3.1) BS03 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066109 9x1n:E (3.1) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066110 9x1n:E (3.1) BS02 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066111 9x1n:E (3.1) BS03 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066112 9x1n:F (3.1) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066113 9x1n:F (3.1) BS02 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066114 9x1o:A (3.0) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066115 9x1o:A (3.0) BS02 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066116 9x1o:A (3.0) BS03 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066117 9x1o:B (3.0) BS01 ADP N/A GO:0043138 ... Q5JHP7 N/A
    1066118 9x1o:C (3.0) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066119 9x1o:C (3.0) BS02 ADP N/A GO:0043138 ... Q5JHP7 N/A
    1066120 9x1o:D (3.0) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066121 9x1o:D (3.0) BS02 ADP N/A GO:0043138 ... Q5JHP7 N/A
    1066122 9x1o:E (3.0) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066123 9x1o:E (3.0) BS02 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066124 9x1o:E (3.0) BS03 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066125 9x1o:E (3.0) BS04 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066126 9x1o:F (3.0) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066127 9x1o:F (3.0) BS02 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066128 9x1o:F (3.0) BS03 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066129 9x1o:F (3.0) BS04 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066130 9x1p:A (3.1) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066131 9x1p:A (3.1) BS02 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066132 9x1p:A (3.1) BS03 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066133 9x1p:B (3.1) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066134 9x1p:B (3.1) BS02 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066135 9x1p:C (3.1) BS01 ADP N/A GO:0043138 ... Q5JHP7 N/A
    1066136 9x1p:D (3.1) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066137 9x1p:D (3.1) BS02 ADP N/A GO:0043138 ... Q5JHP7 N/A
    1066138 9x1p:E (3.1) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066139 9x1p:E (3.1) BS02 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066140 9x1p:E (3.1) BS03 ADP N/A GO:0043138 ... Q5JHP7 N/A
    1066141 9x1p:E (3.1) BS04 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066142 9x1p:F (3.1) BS01 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066143 9x1p:F (3.1) BS02 dna N/A GO:0043138 ... Q5JHP7 N/A
    1066144 9x1p:F (3.1) BS03 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066145 9x1p:F (3.1) BS04 AGS N/A GO:0043138 ... Q5JHP7 N/A
    1066146 9x1p:F (3.1) BS05 MN N/A GO:0043138 ... Q5JHP7 N/A
    1066147 9x25:B (3.4) BS01 dna N/A N/A O28412 41242302
    1066148 9x25:C (3.4) BS01 rna N/A N/A O28413 41242302
    1066149 9x25:C (3.4) BS02 dna N/A N/A O28413 41242302
    1066150 9x25:D (3.4) BS01 rna N/A N/A O28416 41242302
    1066151 9x25:D (3.4) BS02 dna N/A N/A O28416 41242302
    1066152 9x25:E (3.4) BS01 rna N/A N/A O28416 41242302
    1066153 9x25:E (3.4) BS02 dna N/A N/A O28416 41242302
    1066154 9x25:F (3.4) BS01 rna N/A N/A O28416 41242302
    1066155 9x25:F (3.4) BS02 dna N/A N/A O28416 41242302
    1066156 9x25:G (3.4) BS01 dna N/A GO:0005737 ... O28417 41242302
    1066157 9x25:H (3.4) BS01 dna N/A GO:0005737 ... O28417 41242302
    1066158 9x25:I (3.4) BS01 rna N/A N/A O28418 41242302
    1066159 9x2m:1 (3.44) BS01 SOR N/A N/A N/A 41807737
    1066160 9x2m:2 (3.44) BS01 SOR N/A N/A N/A 41807737
    1066161 9x2m:A (3.44) BS01 SOR N/A N/A N/A 41807737
    1066162 9x2m:B (3.44) BS01 SOR N/A N/A N/A 41807737
    1066163 9x2m:E (3.44) BS01 SOR N/A N/A N/A 41807737
    1066164 9x2m:F (3.44) BS01 SOR N/A N/A N/A 41807737
    1066165 9x2q:A (1.68) BS01 peptide N/A N/A P49841 41481598
    1066166 9x2q:A (1.68) BS02 PRO N/A N/A P49841 41481598
    1066167 9x2q:C (1.68) BS01 peptide N/A N/A P49841 41481598
    1066168 9x2q:C (1.68) BS02 PRO N/A N/A P49841 41481598
    1066169 9x2u:A (2.07) BS01 peptide N/A N/A P49841 41481598
    1066170 9x2u:B (2.07) BS01 peptide N/A N/A P49841 41481598
    1066171 9x2v:A (1.39) BS01 peptide N/A N/A P49841 41481598
    1066172 9x2w:A (1.92) BS01 peptide N/A N/A P49841 41481598
    1066173 9x2w:C (1.92) BS01 peptide N/A N/A P49841 41481598
    1066174 9x2x:A (1.79) BS01 peptide N/A N/A P49841 41481598
    1066175 9x2x:C (1.79) BS01 peptide N/A N/A P49841 41481598
    1066176 9x2y:A (1.96) BS01 peptide N/A N/A P49841 41481598
    1066177 9x2y:B (1.96) BS01 peptide N/A N/A P49841 41481598
    1066178 9x3m:A (2.8) BS01 CA N/A GO:0004553 ... F0S5E9 N/A
    1066179 9x3m:A (2.8) BS02 XLS N/A GO:0004553 ... F0S5E9 N/A
    1066180 9x3m:B (2.8) BS01 CA N/A GO:0004553 ... F0S5E9 N/A
    1066181 9x3m:B (2.8) BS02 XLS N/A GO:0004553 ... F0S5E9 N/A
    1066182 9x3m:C (2.8) BS01 CA N/A GO:0004553 ... F0S5E9 N/A
    1066183 9x3m:C (2.8) BS02 XLS N/A GO:0004553 ... F0S5E9 N/A
    1066184 9x3m:D (2.8) BS01 CA N/A GO:0004553 ... F0S5E9 N/A
    1066185 9x3m:D (2.8) BS02 XLS N/A GO:0004553 ... F0S5E9 N/A
    1066186 9x3m:E (2.8) BS01 CA N/A GO:0004553 ... F0S5E9 N/A
    1066187 9x3m:E (2.8) BS02 XLS N/A GO:0004553 ... F0S5E9 N/A
    1066188 9x3m:F (2.8) BS01 CA N/A GO:0004553 ... F0S5E9 N/A
    1066189 9x3m:F (2.8) BS02 XLS N/A GO:0004553 ... F0S5E9 N/A
    1066190 9x3m:G (2.8) BS01 CA N/A GO:0004553 ... F0S5E9 N/A
    1066191 9x3m:G (2.8) BS02 XLS N/A GO:0004553 ... F0S5E9 N/A
    1066192 9x3m:H (2.8) BS01 CA N/A GO:0004553 ... F0S5E9 N/A
    1066193 9x3m:H (2.8) BS02 XLS N/A GO:0004553 ... F0S5E9 N/A
    1066194 9x53:A (1.85) BS01 A1EY6 N/A GO:0005094 ... P52566 41099476
    1066195 9x54:A (2.13) BS01 A1EY5 N/A GO:0005094 ... P52566 41099476
    1066196 9x55:A (2.37) BS01 A1EY4 N/A GO:0005094 ... P52566 41099476
    1066197 9x56:A (1.7) BS01 A1EY3 N/A GO:0005094 ... P52566 41099476
    1066198 9x59:A (1.65) BS01 A1EY2 N/A GO:0005094 ... P52566 41099476
    1066199 9x7c:A (2.3) BS01 8NG N/A N/A P25440 N/A
    1066200 9x7c:A (2.3) BS02 8NG N/A N/A P25440 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).