SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1066201 9x7c:B (2.3) BS01 8NG N/A N/A P25440 N/A
    1066202 9x7c:C (2.3) BS01 8NG N/A N/A P25440 N/A
    1066203 9x7d:A (2.28) BS01 4WI N/A N/A A0A166XB12 41388583
    1066204 9x7d:B (2.28) BS01 4WI N/A N/A A0A166XB12 41388583
    1066205 9x7d:C (2.28) BS01 4WI N/A N/A A0A166XB12 41388583
    1066206 9x7d:D (2.28) BS01 4WI N/A N/A A0A166XB12 41388583
    1066207 9x7d:E (2.28) BS01 4WI N/A N/A A0A166XB12 41388583
    1066208 9x7d:F (2.28) BS01 4WI N/A N/A A0A166XB12 41388583
    1066209 9x7e:A (2.37) BS01 4WI N/A N/A A0A8F2ZG71 41388583
    1066210 9x7e:B (2.37) BS01 4WI N/A N/A A0A8F2ZG71 41388583
    1066211 9x7e:C (2.37) BS01 4WI N/A N/A A0A8F2ZG71 41388583
    1066212 9x7e:D (2.37) BS01 4WI N/A N/A A0A8F2ZG71 41388583
    1066213 9x7e:F (2.37) BS01 4WI N/A N/A A0A8F2ZG71 41388583
    1066214 9x7e:G (2.37) BS01 4WI N/A N/A A0A8F2ZG71 41388583
    1066215 9x7e:H (2.37) BS01 4WI N/A N/A A0A8F2ZG71 41388583
    1066216 9x7f:A (2.64) BS01 A1D7G N/A N/A A0A166XB12 41388583
    1066217 9x7f:B (2.64) BS01 A1D7G N/A N/A A0A166XB12 41388583
    1066218 9x7f:C (2.64) BS01 A1D7G N/A N/A A0A166XB12 41388583
    1066219 9x7f:D (2.64) BS01 A1D7G N/A N/A A0A166XB12 41388583
    1066220 9x7f:E (2.64) BS01 A1D7G N/A N/A A0A166XB12 41388583
    1066221 9x7f:F (2.64) BS01 A1D7G N/A N/A A0A166XB12 41388583
    1066222 9x7g:A (2.57) BS01 A1D7N N/A N/A A0A166XB12 41388583
    1066223 9x7g:B (2.57) BS01 A1D7N N/A N/A A0A166XB12 41388583
    1066224 9x7g:C (2.57) BS01 A1D7N N/A N/A A0A166XB12 41388583
    1066225 9x7g:D (2.57) BS01 A1D7N N/A N/A A0A166XB12 41388583
    1066226 9x7g:E (2.57) BS01 A1D7N N/A N/A A0A166XB12 41388583
    1066227 9x7g:F (2.57) BS01 A1D7N N/A N/A A0A166XB12 41388583
    1066228 9x7h:A (2.56) BS01 A1D7M N/A N/A A0A166XB12 41388583
    1066229 9x7h:B (2.56) BS01 A1D7M N/A N/A A0A166XB12 41388583
    1066230 9x7h:C (2.56) BS01 A1D7M N/A N/A A0A166XB12 41388583
    1066231 9x7h:D (2.56) BS01 A1D7M N/A N/A A0A166XB12 41388583
    1066232 9x7h:E (2.56) BS01 A1D7M N/A N/A A0A166XB12 41388583
    1066233 9x7h:F (2.56) BS01 A1D7M N/A N/A A0A166XB12 41388583
    1066234 9x7i:A (2.23) BS01 A1D7N N/A N/A A0A8F2ZG71 41388583
    1066235 9x7i:B (2.23) BS01 A1D7N N/A N/A A0A8F2ZG71 41388583
    1066236 9x7i:C (2.23) BS01 A1D7N N/A N/A A0A8F2ZG71 41388583
    1066237 9x7i:D (2.23) BS01 A1D7N N/A N/A A0A8F2ZG71 41388583
    1066238 9x7i:E (2.23) BS01 A1D7N N/A N/A A0A8F2ZG71 41388583
    1066239 9x7i:F (2.23) BS01 A1D7N N/A N/A A0A8F2ZG71 41388583
    1066240 9x7i:G (2.23) BS01 A1D7N N/A N/A A0A8F2ZG71 41388583
    1066241 9x7i:H (2.23) BS01 A1D7N N/A N/A A0A8F2ZG71 41388583
    1066242 9x8s:A (1.696) BS01 peptide N/A N/A O95619 N/A
    1066243 9x8s:D (1.696) BS01 peptide N/A N/A O95619 N/A
    1066244 9x8u:A (3.001) BS01 peptide N/A N/A O95619 N/A
    1066245 9x8u:D (3.001) BS01 peptide N/A N/A O95619 N/A
    1066246 9x8x:A (2.89) BS01 PO4 N/A GO:0005515 ... O43826 41381426
    1066247 9x8x:C (2.89) BS01 PO4 N/A GO:0005515 ... O43826 41381426
    1066248 9x94:A (2.57) BS01 rna N/A N/A N/A 41665008
    1066249 9x94:A (2.57) BS02 dna N/A N/A N/A 41665008
    1066250 9x94:A (2.57) BS03 dna N/A N/A N/A 41665008
    1066251 9x94:B (2.57) BS01 rna N/A N/A N/A 41665008
    1066252 9x94:B (2.57) BS02 dna N/A N/A N/A 41665008
    1066253 9x94:B (2.57) BS03 dna N/A N/A N/A 41665008
    1066254 9x94:E (2.57) BS01 rna N/A N/A N/A 41665008
    1066255 9x94:E (2.57) BS02 dna N/A N/A N/A 41665008
    1066256 9x94:E (2.57) BS03 dna N/A N/A N/A 41665008
    1066257 9x94:F (2.57) BS01 dna N/A N/A N/A 41665008
    1066258 9x94:F (2.57) BS02 dna N/A N/A N/A 41665008
    1066259 9x94:I (2.57) BS01 dna N/A N/A N/A 41665008
    1066260 9x94:I (2.57) BS02 rna N/A N/A N/A 41665008
    1066261 9x94:I (2.57) BS03 dna N/A N/A N/A 41665008
    1066262 9x94:J (2.57) BS01 dna N/A N/A N/A 41665008
    1066263 9x94:J (2.57) BS02 rna N/A N/A N/A 41665008
    1066264 9x94:J (2.57) BS03 dna N/A N/A N/A 41665008
    1066265 9x94:M (2.57) BS01 dna N/A N/A N/A 41665008
    1066266 9x94:M (2.57) BS02 rna N/A N/A N/A 41665008
    1066267 9x94:M (2.57) BS03 dna N/A N/A N/A 41665008
    1066268 9x94:N (2.57) BS01 dna N/A N/A N/A 41665008
    1066269 9x94:N (2.57) BS02 rna N/A N/A N/A 41665008
    1066270 9x94:N (2.57) BS03 dna N/A N/A N/A 41665008
    1066271 9x97:A (2.89) BS01 PO4 N/A GO:0005515 ... O43826 41381426
    1066272 9x97:C (2.89) BS01 PO4 N/A GO:0005515 ... O43826 41381426
    1066273 9x9b:A (2.8) BS01 rna N/A GO:0003964 ... P0DV59 41665008
    1066274 9x9b:A (2.8) BS02 dna N/A GO:0003964 ... P0DV59 41665008
    1066275 9x9b:A (2.8) BS03 dna N/A GO:0003964 ... P0DV59 41665008
    1066276 9x9b:B (2.8) BS01 rna N/A N/A P0DV58 41665008
    1066277 9x9b:B (2.8) BS02 dna N/A N/A P0DV58 41665008
    1066278 9x9b:B (2.8) BS03 dna N/A N/A P0DV58 41665008
    1066279 9x9b:B (2.8) BS04 ATP N/A N/A P0DV58 41665008
    1066280 9x9b:B (2.8) BS05 ATP N/A N/A P0DV58 41665008
    1066281 9x9b:E (2.8) BS01 rna N/A GO:0003964 ... P0DV59 41665008
    1066282 9x9b:E (2.8) BS02 dna N/A GO:0003964 ... P0DV59 41665008
    1066283 9x9b:E (2.8) BS03 dna N/A GO:0003964 ... P0DV59 41665008
    1066284 9x9b:F (2.8) BS01 rna N/A N/A P0DV58 41665008
    1066285 9x9b:F (2.8) BS02 dna N/A N/A P0DV58 41665008
    1066286 9x9b:F (2.8) BS03 dna N/A N/A P0DV58 41665008
    1066287 9x9b:F (2.8) BS04 ATP N/A N/A P0DV58 41665008
    1066288 9x9b:F (2.8) BS05 ATP N/A N/A P0DV58 41665008
    1066289 9x9b:I (2.8) BS01 dna N/A GO:0003964 ... P0DV59 41665008
    1066290 9x9b:I (2.8) BS02 rna N/A GO:0003964 ... P0DV59 41665008
    1066291 9x9b:I (2.8) BS03 dna N/A GO:0003964 ... P0DV59 41665008
    1066292 9x9b:J (2.8) BS01 dna N/A N/A P0DV58 41665008
    1066293 9x9b:J (2.8) BS02 rna N/A N/A P0DV58 41665008
    1066294 9x9b:J (2.8) BS03 dna N/A N/A P0DV58 41665008
    1066295 9x9b:J (2.8) BS04 ATP N/A N/A P0DV58 41665008
    1066296 9x9b:J (2.8) BS05 ATP N/A N/A P0DV58 41665008
    1066297 9x9b:M (2.8) BS01 dna N/A GO:0003964 ... P0DV59 41665008
    1066298 9x9b:M (2.8) BS02 rna N/A GO:0003964 ... P0DV59 41665008
    1066299 9x9b:M (2.8) BS03 dna N/A GO:0003964 ... P0DV59 41665008
    1066300 9x9b:N (2.8) BS01 dna N/A N/A P0DV58 41665008
    1066301 9x9b:N (2.8) BS02 rna N/A N/A P0DV58 41665008
    1066302 9x9b:N (2.8) BS03 dna N/A N/A P0DV58 41665008
    1066303 9x9b:N (2.8) BS04 ATP N/A N/A P0DV58 41665008
    1066304 9xau:A (1.95) BS01 OAA N/A GO:0005739 ... Q9SJH7 41580056
    1066305 9xau:B (1.95) BS01 OAA N/A GO:0005739 ... Q9SJH7 41580056
    1066306 9xau:C (1.95) BS01 OAA N/A GO:0005739 ... Q9SJH7 41580056
    1066307 9xau:D (1.95) BS01 OAA N/A GO:0005739 ... Q9SJH7 41580056
    1066308 9xax:A (2.08) BS01 NAP N/A N/A N/A 41690594
    1066309 9xax:A (2.08) BS02 TTN N/A N/A N/A 41690594
    1066310 9xax:B (2.08) BS01 NAP N/A N/A N/A 41690594
    1066311 9xax:B (2.08) BS02 TTN N/A N/A N/A 41690594
    1066312 9xax:C (2.08) BS01 TTN N/A N/A N/A 41690594
    1066313 9xax:C (2.08) BS02 NAP N/A N/A N/A 41690594
    1066314 9xax:D (2.08) BS01 TTN N/A N/A N/A 41690594
    1066315 9xax:D (2.08) BS02 NAP N/A N/A N/A 41690594
    1066316 9xax:E (2.08) BS01 TTN N/A N/A N/A 41690594
    1066317 9xax:E (2.08) BS02 NAP N/A N/A N/A 41690594
    1066318 9xax:F (2.08) BS01 TTN N/A N/A N/A 41690594
    1066319 9xax:F (2.08) BS02 NAP N/A N/A N/A 41690594
    1066320 9xax:G (2.08) BS01 TTN N/A N/A N/A 41690594
    1066321 9xax:G (2.08) BS02 NAP N/A N/A N/A 41690594
    1066322 9xax:H (2.08) BS01 NAP N/A N/A N/A 41690594
    1066323 9xax:H (2.08) BS02 TTN N/A N/A N/A 41690594
    1066324 9xax:I (2.08) BS01 NAP N/A N/A N/A 41690594
    1066325 9xax:I (2.08) BS02 TTN N/A N/A N/A 41690594
    1066326 9xax:J (2.08) BS01 NAP N/A N/A N/A 41690594
    1066327 9xax:J (2.08) BS02 TTN N/A N/A N/A 41690594
    1066328 9xax:K (2.08) BS01 NAP N/A N/A N/A 41690594
    1066329 9xax:K (2.08) BS02 TTN N/A N/A N/A 41690594
    1066330 9xax:L (2.08) BS01 NAP N/A N/A N/A 41690594
    1066331 9xax:L (2.08) BS02 TTN N/A N/A N/A 41690594
    1066332 9xb1:A (2.8) BS01 CLR N/A GO:0001992 ... P37288 41545407
    1066333 9xb1:B (2.8) BS01 CLR N/A GO:0001992 ... P37288 41545407
    1066334 9xb9:A (3.1) BS01 PIO N/A GO:0001508 ... O43526 41442279
    1066335 9xb9:A (3.1) BS02 A1LVR N/A GO:0001508 ... O43526 41442279
    1066336 9xb9:A (3.1) BS03 PIO N/A GO:0001508 ... O43526 41442279
    1066337 9xb9:B (3.1) BS01 PIO N/A GO:0001508 ... O43526 41442279
    1066338 9xb9:B (3.1) BS02 PIO N/A GO:0001508 ... O43526 41442279
    1066339 9xb9:B (3.1) BS03 A1LVR N/A GO:0001508 ... O43526 41442279
    1066340 9xb9:C (3.1) BS01 PIO N/A GO:0001508 ... O43526 41442279
    1066341 9xb9:C (3.1) BS02 PIO N/A GO:0001508 ... O43526 41442279
    1066342 9xb9:C (3.1) BS03 A1LVR N/A GO:0001508 ... O43526 41442279
    1066343 9xb9:D (3.1) BS01 PIO N/A GO:0001508 ... O43526 41442279
    1066344 9xb9:D (3.1) BS02 PIO N/A GO:0001508 ... O43526 41442279
    1066345 9xb9:D (3.1) BS03 A1LVR N/A GO:0001508 ... O43526 41442279
    1066346 9xca:B (3.27) BS01 LMN N/A N/A O43826 N/A
    1066347 9xca:C (3.27) BS01 LMN N/A N/A O43826 N/A
    1066348 9xcf:A (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066349 9xcf:B (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066350 9xcf:C (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066351 9xcf:D (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066352 9xcf:E (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066353 9xcf:F (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066354 9xcf:G (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066355 9xcf:H (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066356 9xcf:I (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066357 9xcf:J (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066358 9xcf:K (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066359 9xcf:L (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066360 9xcf:N (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066361 9xcf:O (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066362 9xcf:P (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066363 9xcf:Q (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066364 9xcf:S (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066365 9xcf:T (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066366 9xcf:U (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066367 9xcf:V (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066368 9xcf:W (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066369 9xcf:Y (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066370 9xcf:Z (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066371 9xcf:a (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066372 9xcf:b (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066373 9xcf:f (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066374 9xcf:i (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066375 9xcf:o (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066376 9xcf:p (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066377 9xcf:q (4.58) BS01 rna N/A N/A Q6D0W6 41475348
    1066378 9xcg:A (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066379 9xcg:B (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066380 9xcg:C (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066381 9xcg:D (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066382 9xcg:E (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066383 9xcg:F (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066384 9xcg:G (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066385 9xcg:H (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066386 9xcg:I (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066387 9xcg:J (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066388 9xcg:K (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066389 9xcg:L (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066390 9xcg:N (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066391 9xcg:O (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066392 9xcg:P (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066393 9xcg:Q (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066394 9xcg:S (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066395 9xcg:T (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066396 9xcg:U (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066397 9xcg:V (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066398 9xcg:W (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066399 9xcg:Y (4.85) BS01 rna N/A N/A Q6D0W6 41475348
    1066400 9xcg:Z (4.85) BS01 rna N/A N/A Q6D0W6 41475348

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).