SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1066601 9xy2:A (2.402) BS03 CA N/A GO:0004519 ... N/A N/A
    1066602 9xy2:A (2.402) BS04 CA N/A GO:0004519 ... N/A N/A
    1066603 9xy5:A (2.612) BS01 dna N/A GO:0004519 ... N/A N/A
    1066604 9xy5:A (2.612) BS02 dna N/A GO:0004519 ... N/A N/A
    1066605 9xy5:A (2.612) BS03 CA N/A GO:0004519 ... N/A N/A
    1066606 9xy5:A (2.612) BS04 CA N/A GO:0004519 ... N/A N/A
    1066607 9xy6:A (2.693) BS01 dna N/A GO:0004519 ... N/A N/A
    1066608 9xy6:A (2.693) BS02 dna N/A GO:0004519 ... N/A N/A
    1066609 9xy6:A (2.693) BS03 CA N/A GO:0004519 ... N/A N/A
    1066610 9xy6:A (2.693) BS04 CA N/A GO:0004519 ... N/A N/A
    1066611 9xy8:A (2.49) BS01 dna N/A GO:0004519 ... N/A N/A
    1066612 9xy8:A (2.49) BS02 dna N/A GO:0004519 ... N/A N/A
    1066613 9xy8:A (2.49) BS03 CA N/A GO:0004519 ... N/A N/A
    1066614 9xy8:A (2.49) BS04 CA N/A GO:0004519 ... N/A N/A
    1066615 9xy9:A (1.995) BS01 dna N/A GO:0004519 ... N/A N/A
    1066616 9xy9:A (1.995) BS02 dna N/A GO:0004519 ... N/A N/A
    1066617 9xy9:A (1.995) BS03 CA N/A GO:0004519 ... N/A N/A
    1066618 9xy9:A (1.995) BS04 CA N/A GO:0004519 ... N/A N/A
    1066619 9xya:A (2.303) BS01 dna N/A GO:0004519 ... N/A N/A
    1066620 9xya:A (2.303) BS02 dna N/A GO:0004519 ... N/A N/A
    1066621 9xya:A (2.303) BS03 CA N/A GO:0004519 ... N/A N/A
    1066622 9xya:A (2.303) BS04 CA N/A GO:0004519 ... N/A N/A
    1066623 9xyc:a (3.5) BS01 dna N/A N/A P84233 N/A
    1066624 9xyc:a (3.5) BS02 dna N/A N/A P84233 N/A
    1066625 9xyc:b (3.5) BS01 dna N/A N/A P62799 N/A
    1066626 9xyc:b (3.5) BS02 dna N/A N/A P62799 N/A
    1066627 9xyc:c (3.5) BS01 dna N/A N/A P06897 N/A
    1066628 9xyc:c (3.5) BS02 dna N/A N/A P06897 N/A
    1066629 9xyc:d (3.5) BS01 dna N/A N/A P02281 N/A
    1066630 9xyc:d (3.5) BS02 dna N/A N/A P02281 N/A
    1066631 9xyc:e (3.5) BS01 dna N/A N/A P84233 N/A
    1066632 9xyc:e (3.5) BS02 dna N/A N/A P84233 N/A
    1066633 9xyc:f (3.5) BS01 dna N/A N/A P62799 N/A
    1066634 9xyc:f (3.5) BS02 dna N/A N/A P62799 N/A
    1066635 9xyc:g (3.5) BS01 dna N/A N/A P06897 N/A
    1066636 9xyc:g (3.5) BS02 dna N/A N/A P06897 N/A
    1066637 9xyc:h (3.5) BS01 dna N/A N/A P02281 N/A
    1066638 9xyc:h (3.5) BS02 dna N/A N/A P02281 N/A
    1066639 9xyc:l (3.5) BS01 dna N/A N/A O75475 N/A
    1066640 9xye:A (3.18) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1066641 9xye:B (3.18) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1066642 9xye:C (3.18) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1066643 9xye:D (3.18) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1066644 9xye:E (3.18) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1066645 9xyi:C (2.46) BS01 rna N/A GO:0000175 ... Q8TCS8 41361968
    1066646 9xyk:A (1.73) BS01 A1CRL N/A GO:0002003 ... P48147 41512187
    1066647 9xyk:B (1.73) BS01 A1CRL N/A GO:0002003 ... P48147 41512187
    1066648 9xyk:C (1.73) BS01 A1CRL N/A GO:0002003 ... P48147 41512187
    1066649 9xyl:A (1.81) BS01 A1CRK N/A GO:0002003 ... P48147 41512187
    1066650 9xyl:B (1.81) BS01 A1CRK N/A GO:0002003 ... P48147 41512187
    1066651 9xyl:C (1.81) BS01 A1CRK N/A GO:0002003 ... P48147 41512187
    1066652 9xyl:D (1.81) BS01 A1CRK N/A GO:0002003 ... P48147 41512187
    1066653 9xyl:E (1.81) BS01 A1CRK N/A GO:0002003 ... P48147 41512187
    1066654 9xyl:F (1.81) BS01 A1CRK N/A GO:0002003 ... P48147 41512187
    1066655 9xym:A (2.87) BS01 A1CR5 N/A N/A P0DTD1 41614164
    1066656 9xyu:A (3.5) BS01 dna N/A GO:0000112 ... P19447 N/A
    1066657 9xyu:A (3.5) BS02 dna N/A GO:0000112 ... P19447 N/A
    1066658 9xyu:B (3.5) BS01 dna N/A GO:0000439 ... P18074 N/A
    1066659 9xyu:B (3.5) BS02 SF4 N/A GO:0000439 ... P18074 N/A
    1066660 9xyu:E (3.5) BS01 ZN N/A GO:0000438 ... Q13888 N/A
    1066661 9xyu:E (3.5) BS02 ZN N/A GO:0000438 ... Q13888 N/A
    1066662 9xyu:E (3.5) BS03 ZN N/A GO:0000438 ... Q13888 N/A
    1066663 9xyu:F (3.5) BS01 ZN N/A GO:0000438 ... Q13889 N/A
    1066664 9xyu:F (3.5) BS02 ZN N/A GO:0000438 ... Q13889 N/A
    1066665 9xyu:K (3.5) BS01 dna N/A GO:0000110 ... P23025 N/A
    1066666 9xyu:K (3.5) BS02 dna N/A GO:0000110 ... P23025 N/A
    1066667 9xyu:K (3.5) BS03 ZN N/A GO:0000110 ... P23025 N/A
    1066668 9xz1:A (1.96) BS01 A1CRY N/A GO:0005524 ... P07900 40204148
    1066669 9xz1:B (1.96) BS01 GDP N/A GO:0003924 ... P01116 40204148
    1066670 9xz1:B (1.96) BS02 A1CRY N/A GO:0003924 ... P01116 40204148
    1066671 9xz6:A (2.47) BS01 A1CR3 N/A N/A P0DTD1 41614164
    1066672 9xzf:A (2.65) BS01 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1066673 9xzf:B (2.65) BS01 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1066674 9xzf:C (2.65) BS01 rna N/A GO:0000175 ... Q8TCS8 41361968
    1066675 9xzf:C (2.65) BS02 PO4 N/A GO:0000175 ... Q8TCS8 41361968
    1066676 9xzi:A (2.691) BS01 peptide N/A N/A Q15022 41519789
    1066677 9xzi:A (2.691) BS02 ZN N/A N/A Q15022 41519789
    1066678 9xzj:C (3.13) BS01 peptide N/A GO:0000082 ... Q13616 41587991
    1066679 9xzj:F (3.13) BS01 dna N/A GO:0000724 ... Q8NFZ0 41587991
    1066680 9xzj:F (3.13) BS02 AGS N/A GO:0000724 ... Q8NFZ0 41587991
    1066681 9xzj:F (3.13) BS03 ZN N/A GO:0000724 ... Q8NFZ0 41587991
    1066682 9xzk:C (3.91) BS01 peptide N/A GO:0000082 ... Q13616 41587991
    1066683 9xzl:F (3.0) BS01 dna N/A GO:0000724 ... Q8NFZ0 41587991
    1066684 9xzl:F (3.0) BS02 AGS N/A GO:0000724 ... Q8NFZ0 41587991
    1066685 9xzl:F (3.0) BS03 ZN N/A GO:0000724 ... Q8NFZ0 41587991
    1066686 9xzm:F (10.27) BS01 dna N/A GO:0000724 ... Q8NFZ0 41587991
    1066687 9xzm:F (10.27) BS02 AGS N/A GO:0000724 ... Q8NFZ0 41587991
    1066688 9xzm:F (10.27) BS03 ZN N/A GO:0000724 ... Q8NFZ0 41587991
    1066689 9xzq:B (3.63) BS01 rna N/A GO:0000049 ... Q12400 41427370
    1066690 9xzq:B (3.63) BS02 AN6 N/A GO:0000049 ... Q12400 41427370
    1066691 9xzr:B (3.37) BS01 rna N/A GO:0000049 ... Q12400 41427370
    1066692 9xzr:B (3.37) BS02 AN6 N/A GO:0000049 ... Q12400 41427370
    1066693 9xzs:B (3.89) BS01 rna N/A GO:0000049 ... Q12400 41427370
    1066694 9xzs:B (3.89) BS02 AN6 N/A GO:0000049 ... Q12400 41427370
    1066695 9xzs:C (3.89) BS01 rna N/A GO:0000049 ... Q12400 41427370
    1066696 9xzz:A (1.58) BS01 2P6 N/A GO:0002003 ... P48147 41512187
    1066697 9xzz:B (1.58) BS01 2P6 N/A GO:0002003 ... P48147 41512187
    1066698 9xzz:C (1.58) BS01 2P6 N/A GO:0002003 ... P48147 41512187
    1066699 9y01:B (1.31) BS01 ZN N/A N/A A0A1H3EFV3 40950076
    1066700 9y02:B (1.73) BS01 ZN N/A N/A A0A1H3EFV3 40950076
    1066701 9y02:B (1.73) BS02 ATP N/A N/A A0A1H3EFV3 40950076
    1066702 9y0g:A (1.8) BS01 GDP N/A N/A P01111 41704364
    1066703 9y0g:A (1.8) BS02 A1CRR N/A N/A P01111 41704364
    1066704 9y0g:B (1.8) BS01 GDP N/A N/A P01111 41704364
    1066705 9y0k:L (3.0) BS01 A1CRO N/A GO:0004298 ... A0A024W8G7 N/A
    1066706 9y0k:Z (3.0) BS01 A1CRO N/A GO:0004298 ... A0A024W8G7 N/A
    1066707 9y0p:A (1.47) BS01 peptide N/A N/A P0AEG4 N/A
    1066708 9y0p:C (1.47) BS01 peptide N/A N/A P0AEG4 N/A
    1066709 9y0q:A (1.47) BS01 peptide N/A N/A P0AEG4 N/A
    1066710 9y0r:A (2.2) BS01 peptide N/A GO:0005737 ... P52293 N/A
    1066711 9y12:A (2.5) BS01 COA N/A GO:0016747 ... Q64PL8 N/A
    1066712 9y12:B (2.5) BS01 COA N/A GO:0016747 ... Q64PL8 N/A
    1066713 9y12:C (2.5) BS01 COA N/A GO:0016747 ... Q64PL8 N/A
    1066714 9y12:D (2.5) BS01 COA N/A GO:0016747 ... Q64PL8 N/A
    1066715 9y12:E (2.5) BS01 COA N/A GO:0016747 ... Q64PL8 N/A
    1066716 9y12:F (2.5) BS01 COA N/A GO:0016747 ... Q64PL8 N/A
    1066717 9y12:G (2.5) BS01 COA N/A GO:0016747 ... Q64PL8 N/A
    1066718 9y12:H (2.5) BS01 COA N/A GO:0016747 ... Q64PL8 N/A
    1066719 9y15:A (1.85) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066720 9y15:A (1.85) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066721 9y15:A (1.85) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066722 9y16:A (1.8) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066723 9y16:A (1.8) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066724 9y16:A (1.8) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066725 9y17:A (1.85) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066726 9y17:A (1.85) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066727 9y17:A (1.85) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066728 9y18:A (1.8) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066729 9y18:A (1.8) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066730 9y18:A (1.8) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066731 9y19:A (1.9) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066732 9y19:A (1.9) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066733 9y19:A (1.9) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066734 9y19:A (1.9) BS04 MG N/A GO:0003677 ... P06746 41524291
    1066735 9y19:A (1.9) BS05 MG N/A GO:0003677 ... P06746 41524291
    1066736 9y19:A (1.9) BS06 DUP N/A GO:0003677 ... P06746 41524291
    1066737 9y1a:A (1.93) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066738 9y1a:A (1.93) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066739 9y1a:A (1.93) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066740 9y1a:A (1.93) BS04 MG N/A GO:0003677 ... P06746 41524291
    1066741 9y1a:A (1.93) BS05 MG N/A GO:0003677 ... P06746 41524291
    1066742 9y1a:A (1.93) BS06 F2A N/A GO:0003677 ... P06746 41524291
    1066743 9y1b:A (1.9) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066744 9y1b:A (1.9) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066745 9y1b:A (1.9) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066746 9y1b:A (1.9) BS04 MG N/A GO:0003677 ... P06746 41524291
    1066747 9y1b:A (1.9) BS05 MG N/A GO:0003677 ... P06746 41524291
    1066748 9y1b:A (1.9) BS06 1GC N/A GO:0003677 ... P06746 41524291
    1066749 9y1c:A (1.9) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066750 9y1c:A (1.9) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066751 9y1c:A (1.9) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066752 9y1c:A (1.9) BS04 MG N/A GO:0003677 ... P06746 41524291
    1066753 9y1c:A (1.9) BS05 MG N/A GO:0003677 ... P06746 41524291
    1066754 9y1c:A (1.9) BS06 XC5 N/A GO:0003677 ... P06746 41524291
    1066755 9y1d:A (1.7) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066756 9y1d:A (1.7) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066757 9y1d:A (1.7) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066758 9y1e:A (1.6) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066759 9y1e:A (1.6) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066760 9y1e:A (1.6) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066761 9y1f:A (1.8) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066762 9y1f:A (1.8) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066763 9y1f:A (1.8) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066764 9y1g:A (1.6) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066765 9y1g:A (1.6) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066766 9y1g:A (1.6) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066767 9y1h:A (1.96) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066768 9y1h:A (1.96) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066769 9y1h:A (1.96) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066770 9y1h:A (1.96) BS04 MG N/A GO:0003677 ... P06746 41524291
    1066771 9y1h:A (1.96) BS05 MG N/A GO:0003677 ... P06746 41524291
    1066772 9y1h:A (1.96) BS06 DUP N/A GO:0003677 ... P06746 41524291
    1066773 9y1i:A (2.15) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066774 9y1i:A (2.15) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066775 9y1i:A (2.15) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066776 9y1i:A (2.15) BS04 MG N/A GO:0003677 ... P06746 41524291
    1066777 9y1i:A (2.15) BS05 MG N/A GO:0003677 ... P06746 41524291
    1066778 9y1i:A (2.15) BS06 XC5 N/A GO:0003677 ... P06746 41524291
    1066779 9y1j:A (1.55) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066780 9y1j:A (1.55) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066781 9y1j:A (1.55) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066782 9y1j:A (1.55) BS04 MG N/A GO:0003677 ... P06746 41524291
    1066783 9y1j:A (1.55) BS05 MG N/A GO:0003677 ... P06746 41524291
    1066784 9y1j:A (1.55) BS06 F2A N/A GO:0003677 ... P06746 41524291
    1066785 9y1k:A (1.7) BS01 dna N/A GO:0003677 ... P06746 41524291
    1066786 9y1k:A (1.7) BS02 dna N/A GO:0003677 ... P06746 41524291
    1066787 9y1k:A (1.7) BS03 dna N/A GO:0003677 ... P06746 41524291
    1066788 9y1k:A (1.7) BS04 MG N/A GO:0003677 ... P06746 41524291
    1066789 9y1k:A (1.7) BS05 MG N/A GO:0003677 ... P06746 41524291
    1066790 9y1k:A (1.7) BS06 1GC N/A GO:0003677 ... P06746 41524291
    1066791 9y1l:A (1.65) BS01 MG N/A N/A A0A059XVC6 N/A
    1066792 9y1l:B (1.65) BS01 MG N/A N/A A0A059XVC6 N/A
    1066793 9y1w:A (1.95) BS01 GDP N/A N/A P01111 41704364
    1066794 9y1w:A (1.95) BS02 A1CRV N/A N/A P01111 41704364
    1066795 9y1w:B (1.95) BS01 GDP N/A N/A P01111 41704364
    1066796 9y1w:B (1.95) BS02 A1CRV N/A N/A P01111 41704364
    1066797 9y1x:A (1.72) BS01 GDP N/A N/A P01111 41704364
    1066798 9y1x:A (1.72) BS02 A1CRW N/A N/A P01111 41704364
    1066799 9y1x:B (1.72) BS01 GDP N/A N/A P01111 41704364
    1066800 9y1x:B (1.72) BS02 A1CRW N/A N/A P01111 41704364

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).