SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5326 5327 5328 5329 5330 5331 5332 5333 5334 5335 5336 5337 5338 5339 5340 5341 5342 5343 5344 5345 5346 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1067001 9y44:F (4.9) BS01 rna N/A N/A N/A 41603730
    1067002 9y44:F (4.9) BS02 rna N/A N/A N/A 41603730
    1067003 9y44:F (4.9) BS03 rna N/A N/A N/A 41603730
    1067004 9y44:FF (4.9) BS01 rna N/A N/A N/A 41603730
    1067005 9y44:G (4.9) BS01 rna N/A N/A N/A 41603730
    1067006 9y44:G (4.9) BS02 rna N/A N/A N/A 41603730
    1067007 9y44:G (4.9) BS03 rna N/A N/A N/A 41603730
    1067008 9y44:GG (4.9) BS01 rna N/A N/A N/A 41603730
    1067009 9y44:H (4.9) BS01 rna N/A N/A N/A 41603730
    1067010 9y44:H (4.9) BS02 rna N/A N/A N/A 41603730
    1067011 9y44:HH (4.9) BS01 rna N/A N/A N/A 41603730
    1067012 9y44:I (4.9) BS01 rna N/A N/A N/A 41603730
    1067013 9y44:I (4.9) BS02 rna N/A N/A N/A 41603730
    1067014 9y44:I (4.9) BS03 rna N/A N/A N/A 41603730
    1067015 9y44:II (4.9) BS01 rna N/A N/A N/A 41603730
    1067016 9y44:II (4.9) BS02 rna N/A N/A N/A 41603730
    1067017 9y44:J (4.9) BS01 rna N/A N/A N/A 41603730
    1067018 9y44:J (4.9) BS02 rna N/A N/A N/A 41603730
    1067019 9y44:JJ (4.9) BS01 rna N/A N/A N/A 41603730
    1067020 9y44:KK (4.9) BS01 rna N/A N/A N/A 41603730
    1067021 9y44:L (4.9) BS01 rna N/A N/A N/A 41603730
    1067022 9y44:L (4.9) BS02 rna N/A N/A N/A 41603730
    1067023 9y44:L (4.9) BS03 rna N/A N/A N/A 41603730
    1067024 9y44:LL (4.9) BS01 rna N/A N/A N/A 41603730
    1067025 9y44:M (4.9) BS01 rna N/A N/A N/A 41603730
    1067026 9y44:M (4.9) BS02 rna N/A N/A N/A 41603730
    1067027 9y44:MM (4.9) BS01 rna N/A N/A N/A 41603730
    1067028 9y44:N (4.9) BS01 rna N/A N/A N/A 41603730
    1067029 9y44:N (4.9) BS02 rna N/A N/A N/A 41603730
    1067030 9y44:N (4.9) BS03 rna N/A N/A N/A 41603730
    1067031 9y44:NN (4.9) BS01 rna N/A N/A N/A 41603730
    1067032 9y44:NN (4.9) BS02 rna N/A N/A N/A 41603730
    1067033 9y44:O (4.9) BS01 rna N/A N/A N/A 41603730
    1067034 9y44:O (4.9) BS02 rna N/A N/A N/A 41603730
    1067035 9y44:OO (4.9) BS01 rna N/A N/A N/A 41603730
    1067036 9y44:P (4.9) BS01 rna N/A N/A N/A 41603730
    1067037 9y44:P (4.9) BS02 rna N/A N/A N/A 41603730
    1067038 9y44:P (4.9) BS03 rna N/A N/A N/A 41603730
    1067039 9y44:P (4.9) BS04 MG N/A N/A N/A 41603730
    1067040 9y44:PP (4.9) BS01 rna N/A N/A N/A 41603730
    1067041 9y44:Q (4.9) BS01 rna N/A N/A N/A 41603730
    1067042 9y44:Q (4.9) BS02 rna N/A N/A N/A 41603730
    1067043 9y44:QQ (4.9) BS01 rna N/A N/A N/A 41603730
    1067044 9y44:RR (4.9) BS01 rna N/A N/A N/A 41603730
    1067045 9y44:S (4.9) BS01 rna N/A N/A N/A 41603730
    1067046 9y44:S (4.9) BS02 rna N/A N/A N/A 41603730
    1067047 9y44:S (4.9) BS03 rna N/A N/A N/A 41603730
    1067048 9y44:SS (4.9) BS01 rna N/A N/A N/A 41603730
    1067049 9y44:T (4.9) BS01 rna N/A N/A N/A 41603730
    1067050 9y44:T (4.9) BS02 rna N/A N/A N/A 41603730
    1067051 9y44:T (4.9) BS03 rna N/A N/A N/A 41603730
    1067052 9y44:TT (4.9) BS01 rna N/A N/A N/A 41603730
    1067053 9y44:U (4.9) BS01 rna N/A N/A N/A 41603730
    1067054 9y44:UU (4.9) BS01 rna N/A N/A N/A 41603730
    1067055 9y44:V (4.9) BS01 rna N/A N/A N/A 41603730
    1067056 9y44:V (4.9) BS02 rna N/A N/A N/A 41603730
    1067057 9y44:VV (4.9) BS01 rna N/A N/A N/A 41603730
    1067058 9y44:W (4.9) BS01 rna N/A N/A N/A 41603730
    1067059 9y44:W (4.9) BS02 rna N/A N/A N/A 41603730
    1067060 9y44:W (4.9) BS03 rna N/A N/A N/A 41603730
    1067061 9y44:WW (4.9) BS01 rna N/A N/A N/A 41603730
    1067062 9y44:X (4.9) BS01 rna N/A N/A N/A 41603730
    1067063 9y44:X (4.9) BS02 rna N/A N/A N/A 41603730
    1067064 9y44:X (4.9) BS03 rna N/A N/A N/A 41603730
    1067065 9y44:XX (4.9) BS01 rna N/A N/A N/A 41603730
    1067066 9y44:Y (4.9) BS01 rna N/A N/A N/A 41603730
    1067067 9y44:Y (4.9) BS02 rna N/A N/A N/A 41603730
    1067068 9y44:YY (4.9) BS01 rna N/A N/A N/A 41603730
    1067069 9y44:Z (4.9) BS01 rna N/A N/A N/A 41603730
    1067070 9y44:ZZ (4.9) BS01 rna N/A N/A N/A 41603730
    1067071 9y44:a (4.9) BS01 rna N/A N/A N/A 41603730
    1067072 9y44:a (4.9) BS02 rna N/A N/A N/A 41603730
    1067073 9y44:aa (4.9) BS01 rna N/A N/A N/A 41603730
    1067074 9y44:aa (4.9) BS02 ZN N/A N/A N/A 41603730
    1067075 9y44:b (4.9) BS01 rna N/A N/A N/A 41603730
    1067076 9y44:b (4.9) BS02 rna N/A N/A N/A 41603730
    1067077 9y44:bb (4.9) BS01 rna N/A N/A N/A 41603730
    1067078 9y44:c (4.9) BS01 rna N/A N/A N/A 41603730
    1067079 9y44:c (4.9) BS02 rna N/A N/A N/A 41603730
    1067080 9y44:cc (4.9) BS01 rna N/A N/A N/A 41603730
    1067081 9y44:d (4.9) BS01 rna N/A N/A N/A 41603730
    1067082 9y44:dd (4.9) BS01 rna N/A N/A N/A 41603730
    1067083 9y44:e (4.9) BS01 rna N/A N/A N/A 41603730
    1067084 9y44:e (4.9) BS02 rna N/A N/A N/A 41603730
    1067085 9y44:ee (4.9) BS01 rna N/A N/A N/A 41603730
    1067086 9y44:f (4.9) BS01 rna N/A N/A N/A 41603730
    1067087 9y44:f (4.9) BS02 rna N/A N/A N/A 41603730
    1067088 9y44:ff (4.9) BS01 rna N/A N/A N/A 41603730
    1067089 9y44:ff (4.9) BS02 ZN N/A N/A N/A 41603730
    1067090 9y44:g (4.9) BS01 rna N/A N/A N/A 41603730
    1067091 9y44:gg (4.9) BS01 rna N/A N/A N/A 41603730
    1067092 9y44:h (4.9) BS01 rna N/A N/A N/A 41603730
    1067093 9y44:h (4.9) BS02 rna N/A N/A N/A 41603730
    1067094 9y44:i (4.9) BS01 rna N/A N/A N/A 41603730
    1067095 9y44:i (4.9) BS02 rna N/A N/A N/A 41603730
    1067096 9y44:j (4.9) BS01 rna N/A N/A N/A 41603730
    1067097 9y44:j (4.9) BS02 rna N/A N/A N/A 41603730
    1067098 9y44:j (4.9) BS03 rna N/A N/A N/A 41603730
    1067099 9y44:j (4.9) BS04 ZN N/A N/A N/A 41603730
    1067100 9y44:k (4.9) BS01 rna N/A N/A N/A 41603730
    1067101 9y44:l (4.9) BS01 rna N/A N/A N/A 41603730
    1067102 9y44:l (4.9) BS02 rna N/A N/A N/A 41603730
    1067103 9y44:l (4.9) BS03 rna N/A N/A N/A 41603730
    1067104 9y44:l (4.9) BS04 MG N/A N/A N/A 41603730
    1067105 9y44:m (4.9) BS01 rna N/A N/A N/A 41603730
    1067106 9y44:m (4.9) BS02 rna N/A N/A N/A 41603730
    1067107 9y44:m (4.9) BS03 ZN N/A N/A N/A 41603730
    1067108 9y44:o (4.9) BS01 rna N/A N/A N/A 41603730
    1067109 9y44:o (4.9) BS02 rna N/A N/A N/A 41603730
    1067110 9y44:o (4.9) BS03 rna N/A N/A N/A 41603730
    1067111 9y44:o (4.9) BS04 ZN N/A N/A N/A 41603730
    1067112 9y44:p (4.9) BS01 rna N/A N/A N/A 41603730
    1067113 9y44:p (4.9) BS02 rna N/A N/A N/A 41603730
    1067114 9y44:p (4.9) BS03 rna N/A N/A N/A 41603730
    1067115 9y44:p (4.9) BS04 ZN N/A N/A N/A 41603730
    1067116 9y44:r (4.9) BS01 rna N/A N/A N/A 41603730
    1067117 9y44:r (4.9) BS02 rna N/A N/A N/A 41603730
    1067118 9y44:s (4.9) BS01 rna N/A N/A N/A 41603730
    1067119 9y44:t (4.9) BS01 rna N/A N/A N/A 41603730
    1067120 9y44:u (4.9) BS01 rna N/A N/A N/A 41603730
    1067121 9y45:A (2.41) BS01 MG N/A GO:0000287 ... P00722 41083086
    1067122 9y45:A (2.41) BS02 MG N/A GO:0000287 ... P00722 41083086
    1067123 9y45:B (2.41) BS01 MG N/A GO:0000287 ... P00722 41083086
    1067124 9y45:B (2.41) BS02 MG N/A GO:0000287 ... P00722 41083086
    1067125 9y45:C (2.41) BS01 MG N/A GO:0000287 ... P00722 41083086
    1067126 9y45:C (2.41) BS02 MG N/A GO:0000287 ... P00722 41083086
    1067127 9y45:D (2.41) BS01 MG N/A GO:0000287 ... P00722 41083086
    1067128 9y45:D (2.41) BS02 MG N/A GO:0000287 ... P00722 41083086
    1067129 9y46:A (2.59) BS01 dna N/A GO:0000786 ... Q71DI3 41083086
    1067130 9y46:A (2.59) BS02 dna N/A GO:0000786 ... Q71DI3 41083086
    1067131 9y46:B (2.59) BS01 dna N/A GO:0000781 ... P62805 41083086
    1067132 9y46:C (2.59) BS01 dna N/A GO:0000786 ... P0C0S8 41083086
    1067133 9y46:C (2.59) BS02 dna N/A GO:0000786 ... P0C0S8 41083086
    1067134 9y46:D (2.59) BS01 dna N/A GO:0000786 ... P62807 41083086
    1067135 9y46:D (2.59) BS02 dna N/A GO:0000786 ... P62807 41083086
    1067136 9y46:E (2.59) BS01 dna N/A GO:0000786 ... Q71DI3 41083086
    1067137 9y46:E (2.59) BS02 dna N/A GO:0000786 ... Q71DI3 41083086
    1067138 9y46:F (2.59) BS01 dna N/A GO:0000781 ... P62805 41083086
    1067139 9y46:F (2.59) BS02 dna N/A GO:0000781 ... P62805 41083086
    1067140 9y46:G (2.59) BS01 dna N/A GO:0000786 ... P0C0S8 41083086
    1067141 9y46:G (2.59) BS02 dna N/A GO:0000786 ... P0C0S8 41083086
    1067142 9y46:H (2.59) BS01 dna N/A GO:0000786 ... P62807 41083086
    1067143 9y46:H (2.59) BS02 dna N/A GO:0000786 ... P62807 41083086
    1067144 9y47:A (2.74) BS01 dna N/A GO:0000786 ... Q71DI3 41083086
    1067145 9y47:A (2.74) BS02 dna N/A GO:0000786 ... Q71DI3 41083086
    1067146 9y47:B (2.74) BS01 dna N/A GO:0000781 ... P62805 41083086
    1067147 9y47:D (2.74) BS01 dna N/A GO:0000786 ... P62807 41083086
    1067148 9y47:D (2.74) BS02 dna N/A GO:0000786 ... P62807 41083086
    1067149 9y47:E (2.74) BS01 dna N/A GO:0000786 ... Q71DI3 41083086
    1067150 9y47:E (2.74) BS02 dna N/A GO:0000786 ... Q71DI3 41083086
    1067151 9y47:F (2.74) BS01 dna N/A GO:0000781 ... P62805 41083086
    1067152 9y47:G (2.74) BS01 dna N/A GO:0000786 ... P0C0S8 41083086
    1067153 9y47:G (2.74) BS02 dna N/A GO:0000786 ... P0C0S8 41083086
    1067154 9y47:H (2.74) BS01 dna N/A GO:0000786 ... P62807 41083086
    1067155 9y47:H (2.74) BS02 dna N/A GO:0000786 ... P62807 41083086
    1067156 9y49:AA (3.4) BS01 rna N/A N/A N/A 41603730
    1067157 9y49:AB (3.4) BS01 rna N/A N/A N/A 41603730
    1067158 9y49:AB (3.4) BS02 rna N/A N/A N/A 41603730
    1067159 9y49:AC (3.4) BS01 rna N/A N/A N/A 41603730
    1067160 9y49:AD (3.4) BS01 rna N/A N/A N/A 41603730
    1067161 9y49:AE (3.4) BS01 rna N/A N/A N/A 41603730
    1067162 9y49:AF (3.4) BS01 rna N/A N/A N/A 41603730
    1067163 9y49:AG (3.4) BS01 rna N/A N/A N/A 41603730
    1067164 9y49:AH (3.4) BS01 rna N/A N/A N/A 41603730
    1067165 9y49:AI (3.4) BS01 rna N/A N/A N/A 41603730
    1067166 9y49:AI (3.4) BS02 rna N/A N/A N/A 41603730
    1067167 9y49:AJ (3.4) BS01 rna N/A N/A N/A 41603730
    1067168 9y49:AK (3.4) BS01 rna N/A N/A N/A 41603730
    1067169 9y49:AL (3.4) BS01 rna N/A N/A N/A 41603730
    1067170 9y49:AM (3.4) BS01 rna N/A N/A N/A 41603730
    1067171 9y49:AN (3.4) BS01 rna N/A N/A N/A 41603730
    1067172 9y49:AN (3.4) BS02 rna N/A N/A N/A 41603730
    1067173 9y49:AO (3.4) BS01 rna N/A N/A N/A 41603730
    1067174 9y49:AP (3.4) BS01 rna N/A N/A N/A 41603730
    1067175 9y49:AQ (3.4) BS01 rna N/A N/A N/A 41603730
    1067176 9y49:AR (3.4) BS01 rna N/A N/A N/A 41603730
    1067177 9y49:AS (3.4) BS01 rna N/A N/A N/A 41603730
    1067178 9y49:AT (3.4) BS01 rna N/A N/A N/A 41603730
    1067179 9y49:AU (3.4) BS01 rna N/A N/A N/A 41603730
    1067180 9y49:AW (3.4) BS01 rna N/A N/A N/A 41603730
    1067181 9y49:AX (3.4) BS01 rna N/A N/A N/A 41603730
    1067182 9y49:AY (3.4) BS01 rna N/A N/A N/A 41603730
    1067183 9y49:AZ (3.4) BS01 rna N/A N/A N/A 41603730
    1067184 9y49:Aa (3.4) BS01 rna N/A N/A N/A 41603730
    1067185 9y49:Ab (3.4) BS01 rna N/A N/A N/A 41603730
    1067186 9y49:Ac (3.4) BS01 rna N/A N/A N/A 41603730
    1067187 9y49:Ad (3.4) BS01 rna N/A N/A N/A 41603730
    1067188 9y49:Ae (3.4) BS01 rna N/A N/A N/A 41603730
    1067189 9y49:Af (3.4) BS01 rna N/A N/A N/A 41603730
    1067190 9y49:Ag (3.4) BS01 rna N/A N/A N/A 41603730
    1067191 9y49:CA (3.4) BS01 rna N/A N/A N/A 41603730
    1067192 9y49:CA (3.4) BS02 rna N/A N/A N/A 41603730
    1067193 9y49:CA (3.4) BS03 rna N/A N/A N/A 41603730
    1067194 9y49:CB (3.4) BS01 rna N/A N/A N/A 41603730
    1067195 9y49:CB (3.4) BS02 rna N/A N/A N/A 41603730
    1067196 9y49:CC (3.4) BS01 rna N/A N/A N/A 41603730
    1067197 9y49:CC (3.4) BS02 rna N/A N/A N/A 41603730
    1067198 9y49:CC (3.4) BS03 rna N/A N/A N/A 41603730
    1067199 9y49:CD (3.4) BS01 rna N/A N/A N/A 41603730
    1067200 9y49:CD (3.4) BS02 rna N/A N/A N/A 41603730

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).