SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1068401 9y6s:VA (3.7) BS03 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068402 9y6s:VB (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068403 9y6s:VC (3.7) BS01 MG N/A GO:0005525 ... A0A640KB30 41279373
    1068404 9y6s:VC (3.7) BS02 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068405 9y6s:VD (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068406 9y6s:VE (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068407 9y6s:VF (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068408 9y6s:VG (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068409 9y6s:VH (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068410 9y6s:VH (3.7) BS02 GTP N/A N/A A0A640KW82 41279373
    1068411 9y6s:VI (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068412 9y6s:VJ (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068413 9y6s:VK (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068414 9y6s:VL (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068415 9y6s:VL (3.7) BS02 GTP N/A N/A A0A640KW82 41279373
    1068416 9y6s:VM (3.7) BS01 MG N/A GO:0005525 ... A0A640KB30 41279373
    1068417 9y6s:VM (3.7) BS02 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068418 9y6s:VN (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068419 9y6s:VN (3.7) BS02 GTP N/A N/A A0A640KW82 41279373
    1068420 9y6s:VO (3.7) BS01 MG N/A GO:0005525 ... A0A640KB30 41279373
    1068421 9y6s:VO (3.7) BS02 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068422 9y6s:VP (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068423 9y6s:VQ (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068424 9y6s:VR (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068425 9y6s:VR (3.7) BS02 GTP N/A N/A A0A640KW82 41279373
    1068426 9y6s:VS (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068427 9y6s:VT (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068428 9y6s:VT (3.7) BS02 GTP N/A N/A A0A640KW82 41279373
    1068429 9y6s:VU (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068430 9y6s:VV (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068431 9y6s:VW (3.7) BS01 MG N/A GO:0005525 ... A0A640KB30 41279373
    1068432 9y6s:VW (3.7) BS02 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068433 9y6s:VX (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068434 9y6s:VX (3.7) BS02 GTP N/A N/A A0A640KW82 41279373
    1068435 9y6s:VY (3.7) BS01 MG N/A GO:0005525 ... A0A640KB30 41279373
    1068436 9y6s:VY (3.7) BS02 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068437 9y6s:W (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068438 9y6s:WA (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068439 9y6s:WB (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068440 9y6s:WB (3.7) BS02 GTP N/A N/A A0A640KW82 41279373
    1068441 9y6s:WC (3.7) BS01 MG N/A GO:0005525 ... A0A640KB30 41279373
    1068442 9y6s:WC (3.7) BS02 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068443 9y6s:WD (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068444 9y6s:WE (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068445 9y6s:WF (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068446 9y6s:WG (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068447 9y6s:WH (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068448 9y6s:WI (3.7) BS01 MG N/A GO:0005525 ... A0A640KB30 41279373
    1068449 9y6s:WI (3.7) BS02 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068450 9y6s:WJ (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068451 9y6s:WK (3.7) BS01 MG N/A GO:0005525 ... A0A640KB30 41279373
    1068452 9y6s:WK (3.7) BS02 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068453 9y6s:WL (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068454 9y6s:WM (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068455 9y6s:WN (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068456 9y6s:WO (3.7) BS01 MG N/A GO:0005525 ... A0A640KB30 41279373
    1068457 9y6s:WO (3.7) BS02 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068458 9y6s:WP (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068459 9y6s:WQ (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068460 9y6s:WR (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068461 9y6s:WS (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068462 9y6s:WT (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068463 9y6s:WU (3.7) BS01 MG N/A GO:0005525 ... A0A640KB30 41279373
    1068464 9y6s:WU (3.7) BS02 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068465 9y6s:WV (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068466 9y6s:WW (3.7) BS01 MG N/A GO:0005525 ... A0A640KB30 41279373
    1068467 9y6s:WW (3.7) BS02 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068468 9y6s:WX (3.7) BS01 GDP N/A N/A A0A640KW82 41279373
    1068469 9y6s:WY (3.7) BS01 GTP N/A GO:0005525 ... A0A640KB30 41279373
    1068470 9y6v:A (7.1) BS01 dna N/A GO:0000150 ... O32006
    O34850
    39803483
    1068471 9y6v:A (7.1) BS02 dna N/A GO:0000150 ... O32006
    O34850
    39803483
    1068472 9y6v:A (7.1) BS03 ZN N/A GO:0000150 ... O32006
    O34850
    39803483
    1068473 9y6v:C (7.1) BS01 dna N/A GO:0000150 ... O32006
    O34850
    39803483
    1068474 9y6v:C (7.1) BS02 dna N/A GO:0000150 ... O32006
    O34850
    39803483
    1068475 9y6v:C (7.1) BS03 ZN N/A GO:0000150 ... O32006
    O34850
    39803483
    1068476 9y76:A (1.56) BS01 A1CSX N/A GO:0016567 ... Q9Y4B6 N/A
    1068477 9y76:B (1.56) BS01 A1CSX N/A GO:0016567 ... Q9Y4B6 N/A
    1068478 9y7d:B (3.26) BS01 peptide N/A GO:0005515 ... Q96SW2 N/A
    1068479 9y7d:B (3.26) BS02 ZN N/A GO:0005515 ... Q96SW2 N/A
    1068480 9y7d:B (3.26) BS03 A1AF4 N/A GO:0005515 ... Q96SW2 N/A
    1068481 9y7h:A (4.4) BS01 CA N/A N/A Q01970 41648476
    1068482 9y7j:L (2.83) BS01 QNG N/A N/A Q73368 N/A
    1068483 9y7k:A (2.25) BS01 peptide N/A GO:0005737 ... P52293 N/A
    1068484 9y7p:A (2.5) BS01 GLY N/A N/A P23416 N/A
    1068485 9y7p:A (2.5) BS02 GLY N/A N/A P23416 N/A
    1068486 9y7p:B (2.5) BS01 GLY N/A N/A P23416 N/A
    1068487 9y7p:C (2.5) BS01 GLY N/A N/A P23416 N/A
    1068488 9y7p:C (2.5) BS02 GLY N/A N/A P23416 N/A
    1068489 9y7p:D (2.5) BS01 GLY N/A N/A P23416 N/A
    1068490 9y7p:D (2.5) BS02 GLY N/A N/A P23416 N/A
    1068491 9y7p:E (2.5) BS01 GLY N/A N/A P23416 N/A
    1068492 9y7p:E (2.5) BS02 GLY N/A N/A P23416 N/A
    1068493 9y7v:D (4.2) BS01 COA N/A N/A N/A 41690596
    1068494 9y7v:E (4.2) BS01 COA N/A N/A N/A 41690596
    1068495 9y7v:F (4.2) BS01 COA N/A N/A N/A 41690596
    1068496 9y7w:A (3.19) BS01 GLY N/A N/A P23416 N/A
    1068497 9y7w:A (3.19) BS02 GLY N/A N/A P23416 N/A
    1068498 9y7w:B (3.19) BS01 GLY N/A N/A P23416 N/A
    1068499 9y7w:C (3.19) BS01 GLY N/A N/A P23416 N/A
    1068500 9y7w:D (3.19) BS01 GLY N/A N/A P23416 N/A
    1068501 9y7w:D (3.19) BS02 GLY N/A N/A P23416 N/A
    1068502 9y7w:E (3.19) BS01 GLY N/A N/A P23416 N/A
    1068503 9y7w:E (3.19) BS02 GLY N/A N/A P23416 N/A
    1068504 9y7x:A (3.55) BS01 GLY N/A N/A P23416 N/A
    1068505 9y7x:A (3.55) BS02 GLY N/A N/A P23416 N/A
    1068506 9y7x:B (3.55) BS01 GLY N/A N/A P23416 N/A
    1068507 9y7x:B (3.55) BS02 GLY N/A N/A P23416 N/A
    1068508 9y7x:D (3.55) BS01 GLY N/A N/A P23416 N/A
    1068509 9y7x:E (3.55) BS01 GLY N/A N/A P23416 N/A
    1068510 9y7x:E (3.55) BS02 GLY N/A N/A P23416 N/A
    1068511 9y7z:A (2.78) BS01 GLY N/A N/A P23416 N/A
    1068512 9y7z:A (2.78) BS02 GLY N/A N/A P23416 N/A
    1068513 9y7z:B (2.78) BS01 GLY N/A N/A P23416 N/A
    1068514 9y7z:B (2.78) BS02 GLY N/A N/A P23416 N/A
    1068515 9y7z:C (2.78) BS01 GLY N/A N/A P23416 N/A
    1068516 9y7z:C (2.78) BS02 GLY N/A N/A P23416 N/A
    1068517 9y7z:D (2.78) BS01 GLY N/A N/A P23416 N/A
    1068518 9y7z:D (2.78) BS02 GLY N/A N/A P23416 N/A
    1068519 9y7z:E (2.78) BS01 GLY N/A N/A P23416 N/A
    1068520 9y7z:E (2.78) BS02 GLY N/A N/A P23416 N/A
    1068521 9y80:A (3.55) BS01 GLY N/A N/A P23416 N/A
    1068522 9y80:A (3.55) BS02 GLY N/A N/A P23416 N/A
    1068523 9y80:B (3.55) BS01 GLY N/A N/A P23416 N/A
    1068524 9y80:B (3.55) BS02 GLY N/A N/A P23416 N/A
    1068525 9y80:C (3.55) BS01 GLY N/A N/A P23416 N/A
    1068526 9y80:C (3.55) BS02 GLY N/A N/A P23416 N/A
    1068527 9y80:D (3.55) BS01 GLY N/A N/A P23416 N/A
    1068528 9y80:D (3.55) BS02 GLY N/A N/A P23416 N/A
    1068529 9y80:E (3.55) BS01 GLY N/A N/A P23416 N/A
    1068530 9y80:E (3.55) BS02 GLY N/A N/A P23416 N/A
    1068531 9y8b:A (1.97) BS01 GG5 N/A GO:0000165 ... Q16539 N/A
    1068532 9y8b:A (1.97) BS02 A1CTD N/A GO:0000165 ... Q16539 N/A
    1068533 9y8h:A (2.67) BS01 CP N/A GO:0004585 ... Q13H08 N/A
    1068534 9y8w:A (3.04) BS01 A1CBU N/A N/A K9N7C7 N/A
    1068535 9y8w:B (3.04) BS01 A1CBU N/A N/A K9N7C7 N/A
    1068536 9y8w:C (3.04) BS01 A1CBU N/A N/A K9N7C7 N/A
    1068537 9y8w:D (3.04) BS01 A1CBU N/A N/A K9N7C7 N/A
    1068538 9y8x:A (2.12) BS01 A1CBU N/A N/A U3M6R3 N/A
    1068539 9y8z:A (2.5) BS01 CLR N/A N/A P23416 N/A
    1068540 9y8z:B (2.5) BS01 CLR N/A N/A P23416 N/A
    1068541 9y8z:C (2.5) BS01 CLR N/A N/A P23416 N/A
    1068542 9y8z:D (2.5) BS01 CLR N/A N/A P23416 N/A
    1068543 9y8z:E (2.5) BS01 CLR N/A N/A P23416 N/A
    1068544 9y94:A (3.6) BS01 GLY N/A N/A P23416 N/A
    1068545 9y94:A (3.6) BS02 GLY N/A N/A P23416 N/A
    1068546 9y94:B (3.6) BS01 GLY N/A N/A P23416 N/A
    1068547 9y94:B (3.6) BS02 GLY N/A N/A P23416 N/A
    1068548 9y94:C (3.6) BS01 GLY N/A N/A P23416 N/A
    1068549 9y94:C (3.6) BS02 GLY N/A N/A P23416 N/A
    1068550 9y94:D (3.6) BS01 GLY N/A N/A P23416 N/A
    1068551 9y94:D (3.6) BS02 GLY N/A N/A P23416 N/A
    1068552 9y94:E (3.6) BS01 GLY N/A N/A P23416 N/A
    1068553 9y94:E (3.6) BS02 GLY N/A N/A P23416 N/A
    1068554 9y95:A (3.45) BS01 RI5 N/A N/A P23416 N/A
    1068555 9y95:D (3.45) BS01 RI5 N/A N/A P23416 N/A
    1068556 9y96:E (3.36) BS01 GLY N/A N/A P23416 N/A
    1068557 9y9b:A (2.7) BS01 A1CTX N/A N/A O00444 41329867
    1068558 9y9c:OA (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068559 9y9c:OB (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068560 9y9c:OC (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068561 9y9c:OD (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068562 9y9c:OE (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068563 9y9c:OF (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068564 9y9c:OG (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068565 9y9c:OH (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068566 9y9c:OI (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068567 9y9c:OJ (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068568 9y9c:OL (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068569 9y9c:OM (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068570 9y9c:ON (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068571 9y9c:OO (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068572 9y9c:OP (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068573 9y9c:OQ (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068574 9y9c:OR (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068575 9y9c:OS (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068576 9y9c:OT (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068577 9y9c:OU (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068578 9y9c:OV (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068579 9y9c:OX (3.5) BS01 ZN N/A N/A A0A0F3V1L6 N/A
    1068580 9y9j:A (3.58) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068581 9y9j:B (3.58) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068582 9y9j:C (3.58) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068583 9y9j:D (3.58) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068584 9y9j:E (3.58) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068585 9y9l:A (3.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068586 9y9l:B (3.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068587 9y9l:C (3.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068588 9y9l:D (3.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068589 9y9l:E (3.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068590 9y9m:A (3.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068591 9y9m:B (3.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068592 9y9m:C (3.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068593 9y9m:D (3.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068594 9y9m:E (3.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068595 9y9n:A (1.81) BS01 A1CTV N/A N/A O00444 41329867
    1068596 9y9p:A (2.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068597 9y9p:B (2.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068598 9y9p:C (2.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068599 9y9p:D (2.06) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1068600 9y9p:E (2.06) BS01 ADP N/A GO:0000287 ... P68135 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).