SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1069001 9ya3:A3 (3.3) BS01 GTP N/A GO:0005525 ... I7BFC9 41366525
    1069002 9ya3:A3 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069003 9ya3:A4 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069004 9ya3:A4 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069005 9ya3:A5 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069006 9ya3:A5 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069007 9ya3:A6 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069008 9ya3:A6 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069009 9ya3:A7 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069010 9ya3:A7 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069011 9ya3:A8 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069012 9ya3:A8 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069013 9ya3:A9 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069014 9ya3:A9 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069015 9ya3:B0 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069016 9ya3:B0 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069017 9ya3:B0 (3.3) BS03 MG N/A GO:0005856 ... P10873 41366525
    1069018 9ya3:B1 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069019 9ya3:B1 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069020 9ya3:B2 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069021 9ya3:B2 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069022 9ya3:B2 (3.3) BS03 MG N/A GO:0005856 ... P10873 41366525
    1069023 9ya3:B3 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069024 9ya3:B3 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069025 9ya3:B4 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069026 9ya3:B4 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069027 9ya3:B4 (3.3) BS03 MG N/A GO:0005856 ... P10873 41366525
    1069028 9ya3:B5 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069029 9ya3:B5 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069030 9ya3:B6 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069031 9ya3:B6 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069032 9ya3:B7 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069033 9ya3:B7 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069034 9ya3:B8 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069035 9ya3:B8 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069036 9ya3:B9 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069037 9ya3:B9 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069038 9ya3:C0 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069039 9ya3:C0 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069040 9ya3:C1 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069041 9ya3:C1 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069042 9ya3:C2 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069043 9ya3:C2 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069044 9ya3:C3 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069045 9ya3:C3 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069046 9ya3:C4 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069047 9ya3:C4 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069048 9ya3:C4 (3.3) BS03 MG N/A GO:0005856 ... P10873 41366525
    1069049 9ya3:C5 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069050 9ya3:C5 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069051 9ya3:C6 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069052 9ya3:C6 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069053 9ya3:C7 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069054 9ya3:C7 (3.3) BS02 GTP N/A GO:0005525 ... I7BFC9 41366525
    1069055 9ya3:C7 (3.3) BS03 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069056 9ya3:C8 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069057 9ya3:C8 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069058 9ya3:C9 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069059 9ya3:C9 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069060 9ya3:D0 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069061 9ya3:D0 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069062 9ya3:D1 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069063 9ya3:D1 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069064 9ya3:D2 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069065 9ya3:D2 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069066 9ya3:D3 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069067 9ya3:D3 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069068 9ya3:D4 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069069 9ya3:D4 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069070 9ya3:D5 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069071 9ya3:D5 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069072 9ya3:D6 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069073 9ya3:D6 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069074 9ya3:D7 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069075 9ya3:D7 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069076 9ya3:D8 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069077 9ya3:D8 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069078 9ya3:D9 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069079 9ya3:D9 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069080 9ya3:E0 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069081 9ya3:E0 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069082 9ya3:E1 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069083 9ya3:E1 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069084 9ya3:E2 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069085 9ya3:E2 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069086 9ya3:E3 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069087 9ya3:E3 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069088 9ya3:E4 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069089 9ya3:E4 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069090 9ya3:E5 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069091 9ya3:E5 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069092 9ya3:E6 (3.3) BS01 peptide N/A GO:0005856 ... P10873 41366525
    1069093 9ya3:E6 (3.3) BS02 GTP N/A GO:0005856 ... P10873 41366525
    1069094 9ya3:E7 (3.3) BS01 peptide N/A GO:0005525 ... I7BFC9 41366525
    1069095 9ya3:E7 (3.3) BS02 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069096 9ya3:E8 (3.3) BS01 GTP N/A GO:0005856 ... P10873 41366525
    1069097 9ya3:E9 (3.3) BS01 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069098 9ya3:F0 (3.3) BS01 GTP N/A GO:0005856 ... P10873 41366525
    1069099 9ya3:F1 (3.3) BS01 GDP N/A GO:0005525 ... I7BFC9 41366525
    1069100 9ya3:c (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069101 9ya3:d (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069102 9ya3:e (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069103 9ya3:f (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069104 9ya3:g (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069105 9ya3:h (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069106 9ya3:k (3.3) BS01 peptide N/A GO:0004791 ... A0A7J6K232 41366525
    1069107 9ya3:l (3.3) BS01 peptide N/A GO:0004791 ... A0A7J6K232 41366525
    1069108 9ya3:m (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069109 9ya3:n (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069110 9ya3:o (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069111 9ya3:p (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069112 9ya3:q (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069113 9ya3:r (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069114 9ya3:s (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069115 9ya3:t (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069116 9ya3:u (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069117 9ya3:v (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069118 9ya3:w (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069119 9ya3:x (3.3) BS01 peptide N/A GO:0004791 ... Q8MPF4 41366525
    1069120 9ya9:A (3.09) BS01 A1CTU N/A N/A P41182 41670385
    1069121 9ya9:C (3.09) BS01 A1CTU N/A GO:0005515 ... Q96SW2 41670385
    1069122 9ya9:C (3.09) BS02 ZN N/A GO:0005515 ... Q96SW2 41670385
    1069123 9yah:A (2.9) BS01 CU N/A N/A N/A N/A
    1069124 9yah:A (2.9) BS02 CU N/A N/A N/A N/A
    1069125 9yb5:D (3.2) BS01 GDP N/A GO:0000054 ... P62826 N/A
    1069126 9ybm:A (2.62) BS01 ZN N/A GO:0000166 ... Q6TQR6 N/A
    1069127 9ybn:A (2.53) BS01 rna N/A GO:0000166 ... Q6TQR6 N/A
    1069128 9ybn:A (2.53) BS02 rna N/A GO:0000166 ... Q6TQR6 N/A
    1069129 9ybn:A (2.53) BS03 ZN N/A GO:0000166 ... Q6TQR6 N/A
    1069130 9ybq:A (2.5) BS01 peptide N/A N/A A0A0H3AMP4 41262002
    1069131 9ybq:A (2.5) BS02 peptide N/A N/A A0A0H3AMP4 41262002
    1069132 9ybq:A (2.5) BS03 CA N/A N/A A0A0H3AMP4 41262002
    1069133 9ybq:A (2.5) BS04 CA N/A N/A A0A0H3AMP4 41262002
    1069134 9ybq:A (2.5) BS05 CA N/A N/A A0A0H3AMP4 41262002
    1069135 9ybq:A (2.5) BS06 CA N/A N/A A0A0H3AMP4 41262002
    1069136 9ybq:A (2.5) BS07 CA N/A N/A A0A0H3AMP4 41262002
    1069137 9ybq:A (2.5) BS08 CA N/A N/A A0A0H3AMP4 41262002
    1069138 9ybq:B (2.5) BS01 peptide N/A N/A A0A0H3AMP4 41262002
    1069139 9ybq:B (2.5) BS02 peptide N/A N/A A0A0H3AMP4 41262002
    1069140 9ybq:B (2.5) BS03 CA N/A N/A A0A0H3AMP4 41262002
    1069141 9ybq:B (2.5) BS04 CA N/A N/A A0A0H3AMP4 41262002
    1069142 9ybq:B (2.5) BS05 CA N/A N/A A0A0H3AMP4 41262002
    1069143 9ybq:B (2.5) BS06 CA N/A N/A A0A0H3AMP4 41262002
    1069144 9ybq:B (2.5) BS07 CA N/A N/A A0A0H3AMP4 41262002
    1069145 9ybq:B (2.5) BS08 CA N/A N/A A0A0H3AMP4 41262002
    1069146 9ybq:E (2.5) BS01 peptide N/A N/A A0A0H3AMP4 41262002
    1069147 9ybq:E (2.5) BS02 peptide N/A N/A A0A0H3AMP4 41262002
    1069148 9ybq:E (2.5) BS03 CA N/A N/A A0A0H3AMP4 41262002
    1069149 9ybq:E (2.5) BS04 CA N/A N/A A0A0H3AMP4 41262002
    1069150 9ybq:E (2.5) BS05 CA N/A N/A A0A0H3AMP4 41262002
    1069151 9ybq:E (2.5) BS06 CA N/A N/A A0A0H3AMP4 41262002
    1069152 9ybq:E (2.5) BS07 CA N/A N/A A0A0H3AMP4 41262002
    1069153 9ybq:E (2.5) BS08 CA N/A N/A A0A0H3AMP4 41262002
    1069154 9ybq:G (2.5) BS01 peptide N/A N/A A0A0H3AMP4 41262002
    1069155 9ybq:G (2.5) BS02 CA N/A N/A A0A0H3AMP4 41262002
    1069156 9ybq:G (2.5) BS03 CA N/A N/A A0A0H3AMP4 41262002
    1069157 9ybq:G (2.5) BS04 CA N/A N/A A0A0H3AMP4 41262002
    1069158 9ybq:G (2.5) BS05 CA N/A N/A A0A0H3AMP4 41262002
    1069159 9ybq:G (2.5) BS06 CA N/A N/A A0A0H3AMP4 41262002
    1069160 9ybq:G (2.5) BS07 CA N/A N/A A0A0H3AMP4 41262002
    1069161 9ybq:I (2.5) BS01 peptide N/A N/A A0A0H3AMP4 41262002
    1069162 9ybq:I (2.5) BS02 CA N/A N/A A0A0H3AMP4 41262002
    1069163 9ybq:I (2.5) BS03 CA N/A N/A A0A0H3AMP4 41262002
    1069164 9ybq:I (2.5) BS04 CA N/A N/A A0A0H3AMP4 41262002
    1069165 9ybq:I (2.5) BS05 CA N/A N/A A0A0H3AMP4 41262002
    1069166 9ybq:I (2.5) BS06 CA N/A N/A A0A0H3AMP4 41262002
    1069167 9ybq:I (2.5) BS07 CA N/A N/A A0A0H3AMP4 41262002
    1069168 9ybq:K (2.5) BS01 peptide N/A N/A A0A0H3AMP4 41262002
    1069169 9ybq:K (2.5) BS02 CA N/A N/A A0A0H3AMP4 41262002
    1069170 9ybq:K (2.5) BS03 CA N/A N/A A0A0H3AMP4 41262002
    1069171 9ybq:K (2.5) BS04 CA N/A N/A A0A0H3AMP4 41262002
    1069172 9ybq:K (2.5) BS05 CA N/A N/A A0A0H3AMP4 41262002
    1069173 9ybq:K (2.5) BS06 CA N/A N/A A0A0H3AMP4 41262002
    1069174 9ybq:K (2.5) BS07 CA N/A N/A A0A0H3AMP4 41262002
    1069175 9yc0:A (2.37) BS01 ZN N/A N/A Q8IL11 41525497
    1069176 9yc0:A (2.37) BS02 ZN N/A N/A Q8IL11 41525497
    1069177 9yc0:A (2.37) BS03 CO3 N/A N/A Q8IL11 41525497
    1069178 9yc0:A (2.37) BS04 A1CT4 N/A N/A Q8IL11 41525497
    1069179 9yc0:B (2.37) BS01 ZN N/A N/A Q8IL11 41525497
    1069180 9yc0:B (2.37) BS02 ZN N/A N/A Q8IL11 41525497
    1069181 9yc0:B (2.37) BS03 CO3 N/A N/A Q8IL11 41525497
    1069182 9yc0:B (2.37) BS04 A1CT4 N/A N/A Q8IL11 41525497
    1069183 9yc0:C (2.37) BS01 ZN N/A N/A Q8IL11 41525497
    1069184 9yc0:C (2.37) BS02 ZN N/A N/A Q8IL11 41525497
    1069185 9yc0:C (2.37) BS03 CO3 N/A N/A Q8IL11 41525497
    1069186 9yc0:C (2.37) BS04 A1CT4 N/A N/A Q8IL11 41525497
    1069187 9yc0:D (2.37) BS01 ZN N/A N/A Q8IL11 41525497
    1069188 9yc0:D (2.37) BS02 ZN N/A N/A Q8IL11 41525497
    1069189 9yc0:D (2.37) BS03 CO3 N/A N/A Q8IL11 41525497
    1069190 9yc0:D (2.37) BS04 A1CT4 N/A N/A Q8IL11 41525497
    1069191 9yc0:E (2.37) BS01 ZN N/A N/A Q8IL11 41525497
    1069192 9yc0:E (2.37) BS02 ZN N/A N/A Q8IL11 41525497
    1069193 9yc0:E (2.37) BS03 CO3 N/A N/A Q8IL11 41525497
    1069194 9yc0:E (2.37) BS04 A1CT4 N/A N/A Q8IL11 41525497
    1069195 9yc0:F (2.37) BS01 ZN N/A N/A Q8IL11 41525497
    1069196 9yc0:F (2.37) BS02 ZN N/A N/A Q8IL11 41525497
    1069197 9yc0:F (2.37) BS03 CO3 N/A N/A Q8IL11 41525497
    1069198 9yc0:F (2.37) BS04 A1CT4 N/A N/A Q8IL11 41525497
    1069199 9yc0:G (2.37) BS01 ZN N/A N/A Q8IL11 41525497
    1069200 9yc0:G (2.37) BS02 ZN N/A N/A Q8IL11 41525497

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).