SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1069801 9yh1:AQ (3.22) BS04 P8E N/A N/A N/A 41659214
    1069802 9yh1:AQ (3.22) BS05 P8E N/A N/A N/A 41659214
    1069803 9yh1:AQ (3.22) BS06 P8E N/A N/A N/A 41659214
    1069804 9yh1:AQ (3.22) BS07 P8E N/A N/A N/A 41659214
    1069805 9yh1:AQ (3.22) BS08 P8E N/A N/A N/A 41659214
    1069806 9yh1:AQ (3.22) BS09 P8E N/A N/A N/A 41659214
    1069807 9yh1:AR (3.22) BS01 P8E N/A N/A N/A 41659214
    1069808 9yh1:AR (3.22) BS02 P8E N/A N/A N/A 41659214
    1069809 9yh1:AR (3.22) BS03 P8E N/A N/A N/A 41659214
    1069810 9yh1:AR (3.22) BS04 P8E N/A N/A N/A 41659214
    1069811 9yh1:AR (3.22) BS05 P8E N/A N/A N/A 41659214
    1069812 9yh1:AR (3.22) BS06 P8E N/A N/A N/A 41659214
    1069813 9yh1:AR (3.22) BS07 P8E N/A N/A N/A 41659214
    1069814 9yh1:AR (3.22) BS08 P8E N/A N/A N/A 41659214
    1069815 9yh1:AR (3.22) BS09 P8E N/A N/A N/A 41659214
    1069816 9yh1:AS (3.22) BS01 P8E N/A N/A N/A 41659214
    1069817 9yh1:AS (3.22) BS02 P8E N/A N/A N/A 41659214
    1069818 9yh1:AS (3.22) BS03 P8E N/A N/A N/A 41659214
    1069819 9yh1:AS (3.22) BS04 P8E N/A N/A N/A 41659214
    1069820 9yh1:AS (3.22) BS05 P8E N/A N/A N/A 41659214
    1069821 9yh1:AS (3.22) BS06 P8E N/A N/A N/A 41659214
    1069822 9yh1:AS (3.22) BS07 P8E N/A N/A N/A 41659214
    1069823 9yh1:AS (3.22) BS08 P8E N/A N/A N/A 41659214
    1069824 9yh1:AS (3.22) BS09 P8E N/A N/A N/A 41659214
    1069825 9yh1:AT (3.22) BS01 P8E N/A N/A N/A 41659214
    1069826 9yh1:AT (3.22) BS02 P8E N/A N/A N/A 41659214
    1069827 9yh1:AT (3.22) BS03 P8E N/A N/A N/A 41659214
    1069828 9yh1:AT (3.22) BS04 P8E N/A N/A N/A 41659214
    1069829 9yh1:AT (3.22) BS05 P8E N/A N/A N/A 41659214
    1069830 9yh1:AT (3.22) BS06 P8E N/A N/A N/A 41659214
    1069831 9yh1:AT (3.22) BS07 P8E N/A N/A N/A 41659214
    1069832 9yh1:AT (3.22) BS08 P8E N/A N/A N/A 41659214
    1069833 9yh1:AT (3.22) BS09 P8E N/A N/A N/A 41659214
    1069834 9yh1:AU (3.22) BS01 P8E N/A N/A N/A 41659214
    1069835 9yh1:AU (3.22) BS02 P8E N/A N/A N/A 41659214
    1069836 9yh1:AU (3.22) BS03 P8E N/A N/A N/A 41659214
    1069837 9yh1:AU (3.22) BS04 P8E N/A N/A N/A 41659214
    1069838 9yh1:AU (3.22) BS05 P8E N/A N/A N/A 41659214
    1069839 9yh1:AU (3.22) BS06 P8E N/A N/A N/A 41659214
    1069840 9yh1:AU (3.22) BS07 P8E N/A N/A N/A 41659214
    1069841 9yh1:AU (3.22) BS08 P8E N/A N/A N/A 41659214
    1069842 9yh1:AU (3.22) BS09 P8E N/A N/A N/A 41659214
    1069843 9yh1:AV (3.22) BS01 P8E N/A N/A N/A 41659214
    1069844 9yh1:AV (3.22) BS02 P8E N/A N/A N/A 41659214
    1069845 9yh1:AV (3.22) BS03 P8E N/A N/A N/A 41659214
    1069846 9yh1:AV (3.22) BS04 P8E N/A N/A N/A 41659214
    1069847 9yh1:AV (3.22) BS05 P8E N/A N/A N/A 41659214
    1069848 9yh1:AV (3.22) BS06 P8E N/A N/A N/A 41659214
    1069849 9yh1:AV (3.22) BS07 P8E N/A N/A N/A 41659214
    1069850 9yh1:AV (3.22) BS08 P8E N/A N/A N/A 41659214
    1069851 9yh1:AW (3.22) BS01 P8E N/A N/A N/A 41659214
    1069852 9yh1:AW (3.22) BS02 P8E N/A N/A N/A 41659214
    1069853 9yh1:AW (3.22) BS03 P8E N/A N/A N/A 41659214
    1069854 9yh1:AW (3.22) BS04 P8E N/A N/A N/A 41659214
    1069855 9yh1:AW (3.22) BS05 P8E N/A N/A N/A 41659214
    1069856 9yh1:AW (3.22) BS06 P8E N/A N/A N/A 41659214
    1069857 9yh1:AW (3.22) BS07 P8E N/A N/A N/A 41659214
    1069858 9yh1:AW (3.22) BS08 P8E N/A N/A N/A 41659214
    1069859 9yh1:AW (3.22) BS09 P8E N/A N/A N/A 41659214
    1069860 9yh1:AX (3.22) BS01 P8E N/A N/A N/A 41659214
    1069861 9yh1:AX (3.22) BS02 P8E N/A N/A N/A 41659214
    1069862 9yh1:AX (3.22) BS03 P8E N/A N/A N/A 41659214
    1069863 9yh1:AX (3.22) BS04 P8E N/A N/A N/A 41659214
    1069864 9yh1:AX (3.22) BS05 P8E N/A N/A N/A 41659214
    1069865 9yh1:AX (3.22) BS06 P8E N/A N/A N/A 41659214
    1069866 9yh1:AX (3.22) BS07 P8E N/A N/A N/A 41659214
    1069867 9yh1:AX (3.22) BS08 P8E N/A N/A N/A 41659214
    1069868 9yh1:AX (3.22) BS09 P8E N/A N/A N/A 41659214
    1069869 9yh9:A (1.65) BS01 FE N/A GO:0003824 ... N/A N/A
    1069870 9yh9:B (1.65) BS01 FE N/A GO:0003824 ... N/A N/A
    1069871 9yha:A (2.69) BS01 NAP N/A GO:0000287 ... O75874 41530531
    1069872 9yha:B (2.69) BS01 NAP N/A GO:0000287 ... O75874 41530531
    1069873 9yhb:A (2.85) BS01 NAP N/A GO:0000287 ... O75874 41530531
    1069874 9yhb:B (2.85) BS01 NAP N/A GO:0000287 ... O75874 41530531
    1069875 9yhc:A (1.35) BS01 CA N/A N/A Q8JUX6 N/A
    1069876 9yhc:B (1.35) BS01 CA N/A N/A Q8JUX6 N/A
    1069877 9yhc:C (1.35) BS01 CA N/A N/A Q8JUX6 N/A
    1069878 9yhc:D (1.35) BS01 CA N/A N/A Q8JUX6 N/A
    1069879 9yhd:D (1.81) BS01 APR N/A N/A Q8JUX6 N/A
    1069880 9yhe:A (1.35) BS01 CA N/A N/A Q8JUX6 N/A
    1069881 9yhe:B (1.35) BS01 CA N/A N/A Q8JUX6 N/A
    1069882 9yhe:D (1.35) BS01 CA N/A N/A Q8JUX6 N/A
    1069883 9yhh:A (1.37) BS01 APR N/A N/A Q8JUX6 N/A
    1069884 9yhh:A (1.37) BS02 AR6 N/A N/A Q8JUX6 N/A
    1069885 9yhh:B (1.37) BS01 APR N/A N/A Q8JUX6 N/A
    1069886 9yhh:C (1.37) BS01 APR N/A N/A Q8JUX6 N/A
    1069887 9yhh:C (1.37) BS02 AR6 N/A N/A Q8JUX6 N/A
    1069888 9yhh:D (1.37) BS01 APR N/A N/A Q8JUX6 N/A
    1069889 9yhj:A (1.86) BS01 AR6 N/A N/A Q8JUX6 N/A
    1069890 9yhj:B (1.86) BS01 AR6 N/A N/A Q8JUX6 N/A
    1069891 9yhj:C (1.86) BS01 AR6 N/A N/A Q8JUX6 N/A
    1069892 9yhj:D (1.86) BS01 AR6 N/A N/A Q8JUX6 N/A
    1069893 9yhl:A (1.51) BS01 APR N/A N/A Q8JUX6 N/A
    1069894 9yhl:A (1.51) BS02 AR6 N/A N/A Q8JUX6 N/A
    1069895 9yhl:B (1.51) BS01 APR N/A N/A Q8JUX6 N/A
    1069896 9yhl:B (1.51) BS02 AR6 N/A N/A Q8JUX6 N/A
    1069897 9yhl:C (1.51) BS01 APR N/A N/A Q8JUX6 N/A
    1069898 9yhl:C (1.51) BS02 AR6 N/A N/A Q8JUX6 N/A
    1069899 9yhl:D (1.51) BS01 APR N/A N/A Q8JUX6 N/A
    1069900 9yhu:A (1.96) BS01 dna N/A N/A P18858 41370201
    1069901 9yhu:A (1.96) BS02 dna N/A N/A P18858 41370201
    1069902 9yhu:A (1.96) BS03 AMP N/A N/A P18858 41370201
    1069903 9yhv:A (2.81) BS01 dna N/A N/A P18858 41370201
    1069904 9yhv:A (2.81) BS02 dna N/A N/A P18858 41370201
    1069905 9yhv:A (2.81) BS03 dna N/A N/A P18858 41370201
    1069906 9yhw:A (2.56) BS01 dna N/A N/A P18858 41370201
    1069907 9yhw:A (2.56) BS02 dna N/A N/A P18858 41370201
    1069908 9yhw:A (2.56) BS03 dna N/A N/A P18858 41370201
    1069909 9yhx:A (2.96) BS01 dna N/A N/A P18858 41370201
    1069910 9yhx:A (2.96) BS02 dna N/A N/A P18858 41370201
    1069911 9yhx:A (2.96) BS03 dna N/A N/A P18858 41370201
    1069912 9yhy:A (2.76) BS01 dna N/A N/A P18858 41370201
    1069913 9yhy:A (2.76) BS02 dna N/A N/A P18858 41370201
    1069914 9yhy:A (2.76) BS03 dna N/A N/A P18858 41370201
    1069915 9yi6:A (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069916 9yi6:B (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069917 9yi6:C (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069918 9yi6:D (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069919 9yi6:E (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069920 9yi6:F (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069921 9yi6:G (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069922 9yi6:H (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069923 9yi6:I (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069924 9yi6:J (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069925 9yi6:K (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069926 9yi6:L (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069927 9yi6:M (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069928 9yi6:N (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069929 9yi6:O (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069930 9yi6:P (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069931 9yi6:Q (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069932 9yi6:R (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069933 9yi6:S (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069934 9yi7:A (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069935 9yi7:B (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069936 9yi7:B (2.54) BS02 dna N/A GO:0000262 ... P32787 41280126
    1069937 9yi7:C (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069938 9yi7:D (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069939 9yi7:D (2.54) BS02 dna N/A GO:0000262 ... P32787 41280126
    1069940 9yi7:E (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069941 9yi7:E (2.54) BS02 dna N/A GO:0000262 ... P32787 41280126
    1069942 9yi7:F (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069943 9yi7:G (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069944 9yi7:H (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069945 9yi7:I (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069946 9yi7:I (2.54) BS02 dna N/A GO:0000262 ... P32787 41280126
    1069947 9yi7:J (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069948 9yi7:K (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069949 9yi7:L (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069950 9yi7:M (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069951 9yi7:N (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069952 9yi7:N (2.54) BS02 dna N/A GO:0000262 ... P32787 41280126
    1069953 9yi7:O (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069954 9yi7:P (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069955 9yi7:P (2.54) BS02 dna N/A GO:0000262 ... P32787 41280126
    1069956 9yi7:Q (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069957 9yi7:R (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069958 9yi7:S (2.54) BS01 dna N/A GO:0000262 ... P32787 41280126
    1069959 9yi7:S (2.54) BS02 dna N/A GO:0000262 ... P32787 41280126
    1069960 9yic:A (3.15) BS01 A1CXF N/A GO:0002225 ... Q16552 41256970
    1069961 9yic:B (3.15) BS01 A1CXF N/A GO:0002225 ... Q16552 41256970
    1069962 9yic:C (3.15) BS01 A1CXF N/A GO:0002225 ... Q16552 41256970
    1069963 9yic:D (3.15) BS01 A1CXF N/A GO:0002225 ... Q16552 41256970
    1069964 9yim:A (2.62) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1069965 9yim:B (2.62) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1069966 9yim:C (2.62) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1069967 9yim:D (2.62) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1069968 9yim:E (2.62) BS01 ADP N/A GO:0000287 ... P68135 N/A
    1069969 9yit:A (2.28) BS01 NAP N/A GO:0004353 ... A0A0K3AUK4 N/A
    1069970 9yit:B (2.28) BS01 NAP N/A GO:0004353 ... A0A0K3AUK4 N/A
    1069971 9yit:C (2.28) BS01 NAP N/A GO:0004353 ... A0A0K3AUK4 N/A
    1069972 9yit:D (2.28) BS01 NAP N/A GO:0004353 ... A0A0K3AUK4 N/A
    1069973 9yit:E (2.28) BS01 NAP N/A GO:0004353 ... A0A0K3AUK4 N/A
    1069974 9yit:F (2.28) BS01 NAP N/A GO:0004353 ... A0A0K3AUK4 N/A
    1069975 9yjz:A (2.76) BS01 MG N/A N/A N/A 41768770
    1069976 9yjz:A (2.76) BS02 TPP N/A N/A N/A 41768770
    1069977 9yjz:A (2.76) BS03 FAD N/A N/A N/A 41768770
    1069978 9yjz:A (2.76) BS04 TPP N/A N/A N/A 41768770
    1069979 9yjz:B (2.76) BS01 TPP N/A N/A N/A 41768770
    1069980 9yjz:B (2.76) BS02 MG N/A N/A N/A 41768770
    1069981 9yjz:B (2.76) BS03 TPP N/A N/A N/A 41768770
    1069982 9yjz:B (2.76) BS04 FAD N/A N/A N/A 41768770
    1069983 9yk0:A (2.36) BS01 MG N/A N/A N/A 41768770
    1069984 9yk0:A (2.36) BS02 TPP N/A N/A N/A 41768770
    1069985 9yk0:A (2.36) BS03 FAD N/A N/A N/A 41768770
    1069986 9yk0:A (2.36) BS04 A1CXH N/A N/A N/A 41768770
    1069987 9yk0:B (2.36) BS01 MG N/A N/A N/A 41768770
    1069988 9yk0:B (2.36) BS02 TPP N/A N/A N/A 41768770
    1069989 9yk0:B (2.36) BS03 FAD N/A N/A N/A 41768770
    1069990 9yk0:B (2.36) BS04 A1CXH N/A N/A N/A 41768770
    1069991 9yk1:A (1.8) BS01 rna N/A N/A Q9KEI9 N/A
    1069992 9yk1:A (1.8) BS02 dna N/A N/A Q9KEI9 N/A
    1069993 9yk1:A (1.8) BS03 MG N/A N/A Q9KEI9 N/A
    1069994 9yk2:A (2.16) BS01 A1CXJ N/A N/A Q15562 41678808
    1069995 9yk3:A (1.9) BS01 rna N/A N/A Q9KEI9 N/A
    1069996 9yk3:A (1.9) BS02 dna N/A N/A Q9KEI9 N/A
    1069997 9yk3:A (1.9) BS03 MG N/A N/A Q9KEI9 N/A
    1069998 9yk3:A (1.9) BS04 MG N/A N/A Q9KEI9 N/A
    1069999 9yk4:A (1.78) BS01 HEM N/A GO:0002933 ... P08684 41297515
    1070000 9yk4:A (1.78) BS02 IMD N/A GO:0002933 ... P08684 41297515

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).