SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1070001 9yk4:A (1.78) BS03 PG4 N/A GO:0002933 ... P08684 41297515
    1070002 9yk4:A (1.78) BS04 EDO N/A GO:0002933 ... P08684 41297515
    1070003 9yk4:A (1.78) BS05 EDO N/A GO:0002933 ... P08684 41297515
    1070004 9yk4:A (1.78) BS06 EDO N/A GO:0002933 ... P08684 41297515
    1070005 9yk5:A (2.0) BS01 rna N/A N/A Q9KEI9 N/A
    1070006 9yk5:A (2.0) BS02 dna N/A N/A Q9KEI9 N/A
    1070007 9yk5:A (2.0) BS03 MN N/A N/A Q9KEI9 N/A
    1070008 9yk5:A (2.0) BS04 MG N/A N/A Q9KEI9 N/A
    1070009 9ykb:A (2.5) BS01 MG N/A GO:0043565 ... P41212
    P58335
    N/A
    1070010 9ykb:A (2.5) BS02 MG N/A GO:0043565 ... P41212
    P58335
    N/A
    1070011 9ykb:B (2.5) BS01 MG N/A GO:0043565 ... P41212
    P58335
    N/A
    1070012 9ykc:A (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070013 9ykc:B (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070014 9ykc:C (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070015 9ykc:D (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070016 9ykc:E (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070017 9ykc:F (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070018 9ykc:G (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070019 9ykc:H (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070020 9ykc:I (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070021 9ykc:J (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070022 9ykc:K (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070023 9ykc:L (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070024 9ykc:M (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070025 9ykc:N (3.3) BS01 AGS N/A GO:0000287 ... P0A6F5 41709867
    1070026 9yki:A (1.95) BS01 A1CXP N/A N/A P11309 41849779
    1070027 9ykj:A (3.44) BS01 ADP N/A N/A Q92XN4 41292825
    1070028 9ykj:A (3.44) BS02 ADP N/A N/A Q92XN4 41292825
    1070029 9ykj:B (3.44) BS01 ADP N/A N/A Q92XN4 41292825
    1070030 9ykj:B (3.44) BS02 ADP N/A N/A Q92XN4 41292825
    1070031 9ykp:A (1.96) BS01 YUJ N/A N/A P03367 41448052
    1070032 9ykp:B (1.96) BS01 YUJ N/A N/A P03367 41448052
    1070033 9ykx:A (4.4) BS01 MG N/A GO:0004176 ... O76031 41593052
    1070034 9ykx:A (4.4) BS02 ATP N/A GO:0004176 ... O76031 41593052
    1070035 9ykx:B (4.4) BS01 MG N/A GO:0004176 ... O76031 41593052
    1070036 9ykx:B (4.4) BS02 ATP N/A GO:0004176 ... O76031 41593052
    1070037 9ykx:C (4.4) BS01 ATP N/A GO:0004176 ... O76031 41593052
    1070038 9ykx:C (4.4) BS02 MG N/A GO:0004176 ... O76031 41593052
    1070039 9ykx:D (4.4) BS01 ATP N/A GO:0004176 ... O76031 41593052
    1070040 9ykx:D (4.4) BS02 MG N/A GO:0004176 ... O76031 41593052
    1070041 9ykx:E (4.4) BS01 ADP N/A GO:0004176 ... O76031 41593052
    1070042 9yl5:A (2.56) BS01 LMZ N/A GO:0000906 ... Q7VTN4 N/A
    1070043 9yl5:A (2.56) BS02 LMZ N/A GO:0000906 ... Q7VTN4 N/A
    1070044 9yl5:B (2.56) BS01 LMZ N/A GO:0000906 ... Q7VTN4 N/A
    1070045 9yl5:B (2.56) BS02 LMZ N/A GO:0000906 ... Q7VTN4 N/A
    1070046 9yl5:C (2.56) BS01 LMZ N/A GO:0000906 ... Q7VTN4 N/A
    1070047 9yl5:C (2.56) BS02 LMZ N/A GO:0000906 ... Q7VTN4 N/A
    1070048 9yl5:D (2.56) BS01 LMZ N/A GO:0000906 ... Q7VTN4 N/A
    1070049 9yl5:D (2.56) BS02 LMZ N/A GO:0000906 ... Q7VTN4 N/A
    1070050 9yl5:E (2.56) BS01 LMZ N/A GO:0000906 ... Q7VTN4 N/A
    1070051 9yl5:E (2.56) BS02 LMZ N/A GO:0000906 ... Q7VTN4 N/A
    1070052 9ylh:A (2.02) BS01 ZN N/A GO:0000165 ... Q16539 N/A
    1070053 9ylh:A (2.02) BS02 GG5 N/A GO:0000165 ... Q16539 N/A
    1070054 9ylh:A (2.02) BS03 A1CX9 N/A GO:0000165 ... Q16539 N/A
    1070055 9yll:A (2.38) BS01 dna N/A N/A Q9H165 41822826
    1070056 9yll:A (2.38) BS02 dna N/A N/A Q9H165 41822826
    1070057 9yll:A (2.38) BS03 ZN N/A N/A Q9H165 41822826
    1070058 9yll:A (2.38) BS04 ZN N/A N/A Q9H165 41822826
    1070059 9yll:A (2.38) BS05 ZN N/A N/A Q9H165 41822826
    1070060 9ylm:A (1.91) BS01 dna N/A N/A Q9H165 41822826
    1070061 9ylm:A (1.91) BS02 dna N/A N/A Q9H165 41822826
    1070062 9ylm:A (1.91) BS03 ZN N/A N/A Q9H165 41822826
    1070063 9ylm:A (1.91) BS04 ZN N/A N/A Q9H165 41822826
    1070064 9ylm:A (1.91) BS05 ZN N/A N/A Q9H165 41822826
    1070065 9yln:A (2.15) BS01 dna N/A N/A Q9H165 41822826
    1070066 9yln:A (2.15) BS02 dna N/A N/A Q9H165 41822826
    1070067 9yln:A (2.15) BS03 ZN N/A N/A Q9H165 41822826
    1070068 9yln:A (2.15) BS04 ZN N/A N/A Q9H165 41822826
    1070069 9yln:A (2.15) BS05 ZN N/A N/A Q9H165 41822826
    1070070 9ylo:A (1.97) BS01 dna N/A N/A Q9H165 41822826
    1070071 9ylo:A (1.97) BS02 dna N/A N/A Q9H165 41822826
    1070072 9ylo:A (1.97) BS03 ZN N/A N/A Q9H165 41822826
    1070073 9ylo:A (1.97) BS04 ZN N/A N/A Q9H165 41822826
    1070074 9ylp:A (2.04) BS01 dna N/A N/A Q9H165 41822826
    1070075 9ylp:A (2.04) BS02 dna N/A N/A Q9H165 41822826
    1070076 9ylp:A (2.04) BS03 ZN N/A N/A Q9H165 41822826
    1070077 9ylp:A (2.04) BS04 ZN N/A N/A Q9H165 41822826
    1070078 9ylp:A (2.04) BS05 MG N/A N/A Q9H165 41822826
    1070079 9ymg:A (2.406) BS01 GTP N/A GO:0000226 ... Q2XVP4 41257005
    1070080 9ymg:A (2.406) BS02 MG N/A GO:0000226 ... Q2XVP4 41257005
    1070081 9ymg:B (2.406) BS01 GDP N/A GO:0000226 ... P02554 41257005
    1070082 9ymg:C (2.406) BS01 ANP N/A GO:0003777 ... Q8NI77 41257005
    1070083 9ymg:C (2.406) BS02 MG N/A GO:0003777 ... Q8NI77 41257005
    1070084 9ymg:D (2.406) BS01 GTP N/A GO:0000226 ... Q2XVP4 41257005
    1070085 9ymg:D (2.406) BS02 MG N/A GO:0000226 ... Q2XVP4 41257005
    1070086 9ymg:E (2.406) BS01 GDP N/A GO:0000226 ... P02554 41257005
    1070087 9ymg:F (2.406) BS01 ANP N/A GO:0003777 ... Q8NI77 41257005
    1070088 9ymg:F (2.406) BS02 MG N/A GO:0003777 ... Q8NI77 41257005
    1070089 9ymm:A (2.92) BS01 GSU N/A GO:0000049 ... A0AB36DQE3 N/A
    1070090 9ymm:B (2.92) BS01 GSU N/A GO:0000049 ... A0AB36DQE3 N/A
    1070091 9ymm:C (2.92) BS01 GSU N/A GO:0000049 ... A0AB36DQE3 N/A
    1070092 9ymm:D (2.92) BS01 GSU N/A GO:0000049 ... A0AB36DQE3 N/A
    1070093 9ymt:A (2.07) BS01 A1CYJ N/A N/A N/A 41743328
    1070094 9ymt:A (2.07) BS02 A1CYJ N/A N/A N/A 41743328
    1070095 9ymt:A (2.07) BS03 A1CYJ N/A N/A N/A 41743328
    1070096 9yn9:A (1.64) BS01 5GP N/A GO:0004550 ... Q5CR64 N/A
    1070097 9yn9:A (1.64) BS02 5GP N/A GO:0004550 ... Q5CR64 N/A
    1070098 9yn9:B (1.64) BS01 MG N/A GO:0004550 ... Q5CR64 N/A
    1070099 9yn9:B (1.64) BS02 5GP N/A GO:0004550 ... Q5CR64 N/A
    1070100 9ync:A (3.93) BS01 ADP N/A GO:0001673 ... Q14204 N/A
    1070101 9ync:A (3.93) BS02 ATP N/A GO:0001673 ... Q14204 N/A
    1070102 9ync:A (3.93) BS03 ADP N/A GO:0001673 ... Q14204 N/A
    1070103 9ync:A (3.93) BS04 ADP N/A GO:0001673 ... Q14204 N/A
    1070104 9ync:A (3.93) BS05 MG N/A GO:0001673 ... Q14204 N/A
    1070105 9ync:B (3.93) BS01 ADP N/A GO:0001673 ... Q14204 N/A
    1070106 9ync:B (3.93) BS02 ATP N/A GO:0001673 ... Q14204 N/A
    1070107 9ync:B (3.93) BS03 ADP N/A GO:0001673 ... Q14204 N/A
    1070108 9ync:B (3.93) BS04 ADP N/A GO:0001673 ... Q14204 N/A
    1070109 9ync:B (3.93) BS05 MG N/A GO:0001673 ... Q14204 N/A
    1070110 9ync:B (3.93) BS06 MG N/A GO:0001673 ... Q14204 N/A
    1070111 9ynd:A (4.26) BS01 ADP N/A GO:0001673 ... Q14204 N/A
    1070112 9ynd:A (4.26) BS02 ATP N/A GO:0001673 ... Q14204 N/A
    1070113 9ynd:A (4.26) BS03 ADP N/A GO:0001673 ... Q14204 N/A
    1070114 9ynd:A (4.26) BS04 ADP N/A GO:0001673 ... Q14204 N/A
    1070115 9ynd:A (4.26) BS05 MG N/A GO:0001673 ... Q14204 N/A
    1070116 9yne:A (8.46) BS01 ADP N/A GO:0001673 ... Q14204 N/A
    1070117 9yne:A (8.46) BS02 ATP N/A GO:0001673 ... Q14204 N/A
    1070118 9yne:A (8.46) BS03 ADP N/A GO:0001673 ... Q14204 N/A
    1070119 9yne:A (8.46) BS04 ADP N/A GO:0001673 ... Q14204 N/A
    1070120 9ynf:A (3.92) BS01 ADP N/A GO:0001673 ... Q14204 N/A
    1070121 9ynf:A (3.92) BS02 ATP N/A GO:0001673 ... Q14204 N/A
    1070122 9ynf:A (3.92) BS03 ANP N/A GO:0001673 ... Q14204 N/A
    1070123 9ynf:A (3.92) BS04 ADP N/A GO:0001673 ... Q14204 N/A
    1070124 9ynf:A (3.92) BS05 MG N/A GO:0001673 ... Q14204 N/A
    1070125 9yng:A (4.07) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 N/A
    1070126 9yng:B (4.07) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 N/A
    1070127 9yng:C (4.07) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 N/A
    1070128 9yng:D (4.07) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 N/A
    1070129 9yng:E (4.07) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 N/A
    1070130 9yng:F (4.07) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 N/A
    1070131 9yng:G (4.07) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 N/A
    1070132 9yng:H (4.07) BS01 ATP N/A GO:0001738 ... Q6QAQ1 N/A
    1070133 9yng:I (4.07) BS01 ADP N/A GO:0005815 ... A0A8D1PMN0 N/A
    1070134 9yng:J (4.07) BS01 ADP N/A GO:0005200 ... I3LHK5 N/A
    1070135 9yng:Y (4.07) BS01 ZN N/A GO:0001725 ... A0A4X1TB62 N/A
    1070136 9yng:Y (4.07) BS02 ZN N/A GO:0001725 ... A0A4X1TB62 N/A
    1070137 9ynh:A (5.5) BS01 ADP N/A GO:0001673 ... Q14204 N/A
    1070138 9ynh:A (5.5) BS02 ATP N/A GO:0001673 ... Q14204 N/A
    1070139 9ynh:A (5.5) BS03 ADP N/A GO:0001673 ... Q14204 N/A
    1070140 9ynh:A (5.5) BS04 ADP N/A GO:0001673 ... Q14204 N/A
    1070141 9ynh:B (5.5) BS01 ADP N/A GO:0001673 ... Q14204 N/A
    1070142 9ynh:B (5.5) BS02 ATP N/A GO:0001673 ... Q14204 N/A
    1070143 9ynh:B (5.5) BS03 ADP N/A GO:0001673 ... Q14204 N/A
    1070144 9ynh:B (5.5) BS04 ADP N/A GO:0001673 ... Q14204 N/A
    1070145 9ynj:A (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070146 9ynj:B (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070147 9ynj:C (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070148 9ynj:D (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070149 9ynj:E (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070150 9ynj:F (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070151 9ynj:G (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070152 9ynj:H (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070153 9ynj:I (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070154 9ynj:J (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070155 9ynj:K (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070156 9ynj:L (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070157 9ynj:M (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070158 9ynj:N (4.2) BS01 ADP N/A GO:0000287 ... P0A6F5 41709867
    1070159 9ynz:F (2.05) BS01 dna N/A GO:0003700 ... P17947 N/A
    1070160 9ynz:F (2.05) BS02 dna N/A GO:0003700 ... P17947 N/A
    1070161 9yol:B (2.6) BS01 peptide N/A GO:0000124 ... G0RYM2 41260211
    1070162 9yon:A (2.43) BS01 A1CYM N/A GO:0000166 ... Q8I5R7 N/A
    1070163 9yp6:A (2.8) BS01 ADP N/A N/A P55072 41793187
    1070164 9yp6:A (2.8) BS02 A1CYL N/A N/A P55072 41793187
    1070165 9yp6:B (2.8) BS01 ADP N/A N/A P55072 41793187
    1070166 9yp6:B (2.8) BS02 A1CYL N/A N/A P55072 41793187
    1070167 9yp6:C (2.8) BS01 ADP N/A N/A P55072 41793187
    1070168 9yp6:C (2.8) BS02 A1CYL N/A N/A P55072 41793187
    1070169 9yp6:D (2.8) BS01 ADP N/A N/A P55072 41793187
    1070170 9yp6:D (2.8) BS02 A1CYL N/A N/A P55072 41793187
    1070171 9yp6:E (2.8) BS01 ADP N/A N/A P55072 41793187
    1070172 9yp6:E (2.8) BS02 A1CYL N/A N/A P55072 41793187
    1070173 9yp6:F (2.8) BS01 ADP N/A N/A P55072 41793187
    1070174 9yp6:F (2.8) BS02 A1CYL N/A N/A P55072 41793187
    1070175 9yp8:A (2.4) BS01 ADP N/A N/A P55072 41793187
    1070176 9yp8:A (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070177 9yp8:B (2.4) BS01 ADP N/A N/A P55072 41793187
    1070178 9yp8:B (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070179 9yp8:C (2.4) BS01 ADP N/A N/A P55072 41793187
    1070180 9yp8:C (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070181 9yp8:D (2.4) BS01 ADP N/A N/A P55072 41793187
    1070182 9yp8:D (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070183 9yp8:E (2.4) BS01 ADP N/A N/A P55072 41793187
    1070184 9yp8:E (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070185 9yp8:F (2.4) BS01 ADP N/A N/A P55072 41793187
    1070186 9yp8:F (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070187 9yp8:G (2.4) BS01 ADP N/A N/A P55072 41793187
    1070188 9yp8:G (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070189 9yp8:H (2.4) BS01 ADP N/A N/A P55072 41793187
    1070190 9yp8:H (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070191 9yp8:I (2.4) BS01 ADP N/A N/A P55072 41793187
    1070192 9yp8:I (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070193 9yp8:J (2.4) BS01 ADP N/A N/A P55072 41793187
    1070194 9yp8:J (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070195 9yp8:K (2.4) BS01 ADP N/A N/A P55072 41793187
    1070196 9yp8:K (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070197 9yp8:L (2.4) BS01 ADP N/A N/A P55072 41793187
    1070198 9yp8:L (2.4) BS02 A1CYL N/A N/A P55072 41793187
    1070199 9ypg:A (3.0) BS01 rna N/A GO:0002181 ... G1TT27 41350250
    1070200 9ypg:A (3.0) BS02 rna N/A GO:0002181 ... G1TT27 41350250

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).