SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 5345 5346 5347 5348 5349 5350 5351 5352 5353 5354 5355 5356 5357 5358 5359 5360 5361 5362 5363 5364 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1070801 9ypw:T (2.9) BS01 rna N/A GO:0005737 ... G1SHQ2 41350250
    1070802 9ypw:T (2.9) BS02 rna N/A GO:0005737 ... G1SHQ2 41350250
    1070803 9ypw:TT (2.9) BS01 rna N/A GO:0000028 ... G1TN62 41350250
    1070804 9ypw:U (2.9) BS01 rna N/A GO:0002181 ... G1TSG1 41350250
    1070805 9ypw:UU (2.9) BS01 rna N/A GO:0003735 ... G1SIZ2 41350250
    1070806 9ypw:V (2.9) BS01 rna N/A GO:0000122 ... G1T6D1 41350250
    1070807 9ypw:W (2.9) BS01 rna N/A GO:0002181 ... G1SE28 41350250
    1070808 9ypw:WW (2.9) BS01 rna N/A GO:0003735 ... G1TG89 41350250
    1070809 9ypw:X (2.9) BS01 rna N/A GO:0005634 ... G1SE76 41350250
    1070810 9ypw:X (2.9) BS02 rna N/A GO:0005634 ... G1SE76 41350250
    1070811 9ypw:XX (2.9) BS01 rna N/A GO:0003735 ... G1SZ47 41350250
    1070812 9ypw:Y (2.9) BS01 rna N/A GO:0003735 ... G1SQH0 41350250
    1070813 9ypw:Y (2.9) BS02 rna N/A GO:0003735 ... G1SQH0 41350250
    1070814 9ypw:YY (2.9) BS01 rna N/A GO:0005730 ... A0A5F9D2E6 41350250
    1070815 9ypw:Z (2.9) BS01 rna N/A GO:0002181 ... G1TXF6 41350250
    1070816 9ypw:ZZ (2.9) BS01 rna N/A GO:0003735 ... G1TDB3 41350250
    1070817 9ypw:a (2.9) BS01 rna N/A GO:0003735 ... G1SNY0 41350250
    1070818 9ypw:aa (2.9) BS01 rna N/A GO:0003729 ... G1TFE8 41350250
    1070819 9ypw:b (2.9) BS01 rna N/A GO:0002181 ... G1SGR6 41350250
    1070820 9ypw:bb (2.9) BS01 rna N/A GO:0003735 ... G1TZ76 41350250
    1070821 9ypw:c (2.9) BS01 rna N/A GO:0005737 ... G1TDL2 41350250
    1070822 9ypw:cc (2.9) BS01 rna N/A GO:0000028 ... G1TIB4 41350250
    1070823 9ypw:d (2.9) BS01 rna N/A GO:0002181 ... G1SHG0 41350250
    1070824 9ypw:dd (2.9) BS01 rna N/A GO:0002181 ... G1U7M4 41350250
    1070825 9ypw:dd (2.9) BS02 ZN N/A GO:0002181 ... G1U7M4 41350250
    1070826 9ypw:e (2.9) BS01 rna N/A GO:0005737 ... A0AAA9WVN6 41350250
    1070827 9ypw:ee (2.9) BS01 rna N/A GO:0005634 ... G1T8A2 41350250
    1070828 9ypw:ee (2.9) BS02 rna N/A GO:0005634 ... G1T8A2 41350250
    1070829 9ypw:f (2.9) BS01 rna N/A GO:0005737 ... G1SF08 41350250
    1070830 9ypw:ff (2.9) BS01 rna N/A GO:0003735 ... G1SK22 41350250
    1070831 9ypw:g (2.9) BS01 rna N/A GO:0005737 ... G1TXG5 41350250
    1070832 9ypw:g (2.9) BS02 ZN N/A GO:0005737 ... G1TXG5 41350250
    1070833 9ypw:gg (2.9) BS01 rna N/A GO:0001891 ... G1SJB4 41350250
    1070834 9ypw:h (2.9) BS01 rna N/A GO:0000463 ... G1SIT5 41350250
    1070835 9ypw:h (2.9) BS02 rna N/A GO:0000463 ... G1SIT5 41350250
    1070836 9ypw:i (2.9) BS01 rna N/A GO:0005737 ... G1TTQ5 41350250
    1070837 9ypw:j (2.9) BS01 rna N/A GO:0002181 ... U3KPD5 41350250
    1070838 9ypw:j (2.9) BS02 rna N/A GO:0002181 ... U3KPD5 41350250
    1070839 9ypw:j (2.9) BS03 ZN N/A GO:0002181 ... U3KPD5 41350250
    1070840 9ypw:jj (2.9) BS01 rna N/A GO:0000049 ... O00178 41350250
    1070841 9ypw:jj (2.9) BS02 rna N/A GO:0000049 ... O00178 41350250
    1070842 9ypw:jj (2.9) BS03 GTP N/A GO:0000049 ... O00178 41350250
    1070843 9ypw:jj (2.9) BS04 PHE N/A GO:0000049 ... O00178 41350250
    1070844 9ypw:jj (2.9) BS05 GDP N/A GO:0000049 ... O00178 41350250
    1070845 9ypw:jj (2.9) BS06 MG N/A GO:0000049 ... O00178 41350250
    1070846 9ypw:k (2.9) BS01 rna N/A GO:0003735 ... G1U3J0 41350250
    1070847 9ypw:l (2.9) BS01 rna N/A GO:0022625 ... G1TTN1 41350250
    1070848 9ypw:l (2.9) BS02 rna N/A GO:0022625 ... G1TTN1 41350250
    1070849 9ypw:m (2.9) BS01 rna N/A N/A P0DXC2 41350250
    1070850 9ypw:m (2.9) BS02 ZN N/A N/A P0DXC2 41350250
    1070851 9ypw:o (2.9) BS01 rna N/A GO:0005737 ... G1T040 41350250
    1070852 9ypw:o (2.9) BS02 rna N/A GO:0005737 ... G1T040 41350250
    1070853 9ypw:o (2.9) BS03 ZN N/A GO:0005737 ... G1T040 41350250
    1070854 9ypw:p (2.9) BS01 rna N/A GO:0005737 ... G1SY53 41350250
    1070855 9ypw:p (2.9) BS02 ZN N/A GO:0005737 ... G1SY53 41350250
    1070856 9ypw:r (2.9) BS01 rna N/A GO:0005737 ... G1U7L1 41350250
    1070857 9ypy:A (3.0) BS01 rna N/A GO:0002181 ... G1TT27 41350250
    1070858 9ypy:A (3.0) BS02 rna N/A GO:0002181 ... G1TT27 41350250
    1070859 9ypy:AA (3.0) BS01 rna N/A GO:0000028 ... G1TLT8 41350250
    1070860 9ypy:B (3.0) BS01 rna N/A GO:0003723 ... G1TL06 41350250
    1070861 9ypy:BB (3.0) BS01 rna N/A GO:0003735 ... G1SS70 41350250
    1070862 9ypy:C (3.0) BS01 rna N/A GO:0005737 ... G1SVW5 41350250
    1070863 9ypy:C (3.0) BS02 rna N/A GO:0005737 ... G1SVW5 41350250
    1070864 9ypy:CC (3.0) BS01 rna N/A GO:0003735 ... O18789 41350250
    1070865 9ypy:D (3.0) BS01 rna N/A GO:0000027 ... P19949 41350250
    1070866 9ypy:D (3.0) BS02 rna N/A GO:0000027 ... P19949 41350250
    1070867 9ypy:DD (3.0) BS01 rna N/A GO:0003735 ... G1TNM3 41350250
    1070868 9ypy:E (3.0) BS01 rna N/A GO:0000027 ... G1SKF7 41350250
    1070869 9ypy:EE (3.0) BS01 rna N/A GO:0003723 ... G1TK17 41350250
    1070870 9ypy:FF (3.0) BS01 rna N/A GO:0003735 ... G1TFM5 41350250
    1070871 9ypy:G (3.0) BS01 rna N/A GO:0005737 ... G1STW0 41350250
    1070872 9ypy:G (3.0) BS02 rna N/A GO:0005737 ... G1STW0 41350250
    1070873 9ypy:GG (3.0) BS01 rna N/A GO:0003735 ... G1TM55 41350250
    1070874 9ypy:H (3.0) BS01 rna N/A GO:0002181 ... G1SWI6 41350250
    1070875 9ypy:HH (3.0) BS01 rna N/A GO:0003735 ... G1SVB0 41350250
    1070876 9ypy:I (3.0) BS01 rna N/A GO:0005737 ... B7NZQ2 41350250
    1070877 9ypy:I (3.0) BS02 rna N/A GO:0005737 ... B7NZQ2 41350250
    1070878 9ypy:II (3.0) BS01 rna N/A GO:0003735 ... G1TJW1 41350250
    1070879 9ypy:II (3.0) BS02 rna N/A GO:0003735 ... G1TJW1 41350250
    1070880 9ypy:J (3.0) BS01 rna N/A GO:0005730 ... G1TUB8 41350250
    1070881 9ypy:J (3.0) BS02 rna N/A GO:0005730 ... G1TUB8 41350250
    1070882 9ypy:J (3.0) BS03 rna N/A GO:0005730 ... G1TUB8 41350250
    1070883 9ypy:JJ (3.0) BS01 rna N/A GO:0003735 ... B7NZS8 41350250
    1070884 9ypy:K (3.0) BS01 rna N/A GO:0000463 ... G1TUB1 41350250
    1070885 9ypy:K (3.0) BS02 rna N/A GO:0000463 ... G1TUB1 41350250
    1070886 9ypy:KK (3.0) BS01 rna N/A GO:0003723 ... G1TPV3 41350250
    1070887 9ypy:L (3.0) BS01 rna N/A N/A N/A 41350250
    1070888 9ypy:L (3.0) BS02 rna N/A N/A N/A 41350250
    1070889 9ypy:LL (3.0) BS01 rna N/A GO:0003735 ... G1TRM4 41350250
    1070890 9ypy:M (3.0) BS01 rna N/A GO:0003723 ... G1SZ12 41350250
    1070891 9ypy:MM (3.0) BS01 rna N/A GO:0003735 ... G1SFR8 41350250
    1070892 9ypy:N (3.0) BS01 rna N/A GO:0002181 ... G1T0C1 41350250
    1070893 9ypy:N (3.0) BS02 rna N/A GO:0002181 ... G1T0C1 41350250
    1070894 9ypy:NN (3.0) BS01 rna N/A GO:0003735 ... G1SP51 41350250
    1070895 9ypy:NN (3.0) BS02 rna N/A GO:0003735 ... G1SP51 41350250
    1070896 9ypy:O (3.0) BS01 rna N/A GO:0003729 ... G1TVS8 41350250
    1070897 9ypy:OO (3.0) BS01 rna N/A GO:0003735 ... A0AAA9WYR1 41350250
    1070898 9ypy:P (3.0) BS01 rna N/A GO:0002181 ... G1SCJ6 41350250
    1070899 9ypy:P (3.0) BS02 rna N/A GO:0002181 ... G1SCJ6 41350250
    1070900 9ypy:PP (3.0) BS01 rna N/A GO:0000028 ... G1U0Q2 41350250
    1070901 9ypy:PP (3.0) BS02 rna N/A GO:0000028 ... G1U0Q2 41350250
    1070902 9ypy:PP (3.0) BS03 rna N/A GO:0000028 ... G1U0Q2 41350250
    1070903 9ypy:Q (3.0) BS01 rna N/A GO:0003723 ... G1TFE0 41350250
    1070904 9ypy:QQ (3.0) BS01 rna N/A GO:0000462 ... G1SGX4 41350250
    1070905 9ypy:R (3.0) BS01 rna N/A GO:0022625 ... G1TJR3 41350250
    1070906 9ypy:R (3.0) BS02 rna N/A GO:0022625 ... G1TJR3 41350250
    1070907 9ypy:RR (3.0) BS01 rna N/A GO:0003735 ... G1TU13 41350250
    1070908 9ypy:S (3.0) BS01 rna N/A N/A G1TTY7 41350250
    1070909 9ypy:S (3.0) BS02 rna N/A N/A G1TTY7 41350250
    1070910 9ypy:SS (3.0) BS01 rna N/A GO:0003735 ... G1TPG3 41350250
    1070911 9ypy:SS (3.0) BS02 rna N/A GO:0003735 ... G1TPG3 41350250
    1070912 9ypy:T (3.0) BS01 rna N/A GO:0005737 ... G1SHQ2 41350250
    1070913 9ypy:T (3.0) BS02 rna N/A GO:0005737 ... G1SHQ2 41350250
    1070914 9ypy:TT (3.0) BS01 rna N/A GO:0000028 ... G1TN62 41350250
    1070915 9ypy:U (3.0) BS01 rna N/A GO:0002181 ... G1TSG1 41350250
    1070916 9ypy:UU (3.0) BS01 rna N/A GO:0003735 ... G1SIZ2 41350250
    1070917 9ypy:V (3.0) BS01 rna N/A GO:0000122 ... G1T6D1 41350250
    1070918 9ypy:W (3.0) BS01 rna N/A GO:0002181 ... G1SE28 41350250
    1070919 9ypy:WW (3.0) BS01 rna N/A GO:0003735 ... G1TG89 41350250
    1070920 9ypy:X (3.0) BS01 rna N/A GO:0005634 ... G1SE76 41350250
    1070921 9ypy:X (3.0) BS02 rna N/A GO:0005634 ... G1SE76 41350250
    1070922 9ypy:XX (3.0) BS01 rna N/A GO:0003735 ... G1SZ47 41350250
    1070923 9ypy:Y (3.0) BS01 rna N/A GO:0003735 ... G1SQH0 41350250
    1070924 9ypy:Y (3.0) BS02 rna N/A GO:0003735 ... G1SQH0 41350250
    1070925 9ypy:YY (3.0) BS01 rna N/A GO:0022627 ... G1T3D8 41350250
    1070926 9ypy:Z (3.0) BS01 rna N/A GO:0002181 ... G1TXF6 41350250
    1070927 9ypy:ZZ (3.0) BS01 rna N/A GO:0003735 ... G1TDB3 41350250
    1070928 9ypy:a (3.0) BS01 rna N/A GO:0003735 ... G1SNY0 41350250
    1070929 9ypy:aa (3.0) BS01 rna N/A GO:0003729 ... G1TFE8 41350250
    1070930 9ypy:b (3.0) BS01 rna N/A GO:0002181 ... G1SGR6 41350250
    1070931 9ypy:bb (3.0) BS01 rna N/A GO:0003735 ... G1TZ76 41350250
    1070932 9ypy:c (3.0) BS01 rna N/A GO:0005737 ... G1TDL2 41350250
    1070933 9ypy:cc (3.0) BS01 rna N/A GO:0000028 ... G1TIB4 41350250
    1070934 9ypy:d (3.0) BS01 rna N/A GO:0002181 ... G1SHG0 41350250
    1070935 9ypy:dd (3.0) BS01 rna N/A GO:0002181 ... G1U7M4 41350250
    1070936 9ypy:dd (3.0) BS02 ZN N/A GO:0002181 ... G1U7M4 41350250
    1070937 9ypy:e (3.0) BS01 rna N/A GO:0005737 ... A0AAA9WVN6 41350250
    1070938 9ypy:ee (3.0) BS01 rna N/A GO:0005634 ... G1T8A2 41350250
    1070939 9ypy:f (3.0) BS01 rna N/A GO:0005737 ... G1SF08 41350250
    1070940 9ypy:ff (3.0) BS01 rna N/A GO:0003735 ... G1SK22 41350250
    1070941 9ypy:g (3.0) BS01 rna N/A GO:0005737 ... G1TXG5 41350250
    1070942 9ypy:g (3.0) BS02 ZN N/A GO:0005737 ... G1TXG5 41350250
    1070943 9ypy:gg (3.0) BS01 rna N/A GO:0001891 ... G1SJB4 41350250
    1070944 9ypy:h (3.0) BS01 rna N/A GO:0000463 ... G1SIT5 41350250
    1070945 9ypy:h (3.0) BS02 rna N/A GO:0000463 ... G1SIT5 41350250
    1070946 9ypy:i (3.0) BS01 rna N/A GO:0005737 ... G1TTQ5 41350250
    1070947 9ypy:j (3.0) BS01 rna N/A GO:0002181 ... U3KPD5 41350250
    1070948 9ypy:j (3.0) BS02 rna N/A GO:0002181 ... U3KPD5 41350250
    1070949 9ypy:j (3.0) BS03 ZN N/A GO:0002181 ... U3KPD5 41350250
    1070950 9ypy:k (3.0) BS01 rna N/A GO:0003735 ... G1U3J0 41350250
    1070951 9ypy:l (3.0) BS01 rna N/A GO:0022625 ... G1TTN1 41350250
    1070952 9ypy:l (3.0) BS02 rna N/A GO:0022625 ... G1TTN1 41350250
    1070953 9ypy:m (3.0) BS01 rna N/A N/A A0A2K5PSA0 41350250
    1070954 9ypy:m (3.0) BS02 ZN N/A N/A A0A2K5PSA0 41350250
    1070955 9ypy:o (3.0) BS01 rna N/A N/A A0AAA9WX15 41350250
    1070956 9ypy:o (3.0) BS02 rna N/A N/A A0AAA9WX15 41350250
    1070957 9ypy:o (3.0) BS03 ZN N/A N/A A0AAA9WX15 41350250
    1070958 9ypy:o (3.0) BS04 ATP N/A N/A A0AAA9WX15 41350250
    1070959 9ypy:p (3.0) BS01 rna N/A GO:0005737 ... G1SY53 41350250
    1070960 9ypy:p (3.0) BS02 ZN N/A GO:0005737 ... G1SY53 41350250
    1070961 9ypy:r (3.0) BS01 rna N/A GO:0005737 ... G1U7L1 41350250
    1070962 9ypz:A (2.9) BS01 rna N/A GO:0002181 ... G1TT27 41350250
    1070963 9ypz:A (2.9) BS02 rna N/A GO:0002181 ... G1TT27 41350250
    1070964 9ypz:AA (2.9) BS01 rna N/A GO:0000028 ... G1TLT8 41350250
    1070965 9ypz:B (2.9) BS01 rna N/A GO:0003723 ... G1TL06 41350250
    1070966 9ypz:BB (2.9) BS01 rna N/A GO:0003735 ... G1SS70 41350250
    1070967 9ypz:C (2.9) BS01 rna N/A GO:0005737 ... G1SVW5 41350250
    1070968 9ypz:C (2.9) BS02 rna N/A GO:0005737 ... G1SVW5 41350250
    1070969 9ypz:CC (2.9) BS01 rna N/A GO:0003735 ... O18789 41350250
    1070970 9ypz:D (2.9) BS01 rna N/A GO:0000027 ... P19949 41350250
    1070971 9ypz:D (2.9) BS02 rna N/A GO:0000027 ... P19949 41350250
    1070972 9ypz:DD (2.9) BS01 rna N/A GO:0003735 ... G1TNM3 41350250
    1070973 9ypz:E (2.9) BS01 rna N/A GO:0000027 ... G1SKF7 41350250
    1070974 9ypz:EE (2.9) BS01 rna N/A GO:0003723 ... G1TK17 41350250
    1070975 9ypz:FF (2.9) BS01 rna N/A GO:0003735 ... G1TFM5 41350250
    1070976 9ypz:FF (2.9) BS02 rna N/A GO:0003735 ... G1TFM5 41350250
    1070977 9ypz:G (2.9) BS01 rna N/A GO:0005737 ... G1STW0 41350250
    1070978 9ypz:G (2.9) BS02 rna N/A GO:0005737 ... G1STW0 41350250
    1070979 9ypz:GG (2.9) BS01 rna N/A GO:0003735 ... G1TM55 41350250
    1070980 9ypz:H (2.9) BS01 rna N/A GO:0002181 ... G1SWI6 41350250
    1070981 9ypz:HH (2.9) BS01 rna N/A GO:0003735 ... G1SVB0 41350250
    1070982 9ypz:I (2.9) BS01 rna N/A GO:0005737 ... B7NZQ2 41350250
    1070983 9ypz:I (2.9) BS02 rna N/A GO:0005737 ... B7NZQ2 41350250
    1070984 9ypz:I (2.9) BS03 ATP N/A GO:0005737 ... B7NZQ2 41350250
    1070985 9ypz:II (2.9) BS01 rna N/A GO:0003735 ... G1TJW1 41350250
    1070986 9ypz:II (2.9) BS02 rna N/A GO:0003735 ... G1TJW1 41350250
    1070987 9ypz:J (2.9) BS01 rna N/A GO:0005730 ... G1TUB8 41350250
    1070988 9ypz:J (2.9) BS02 rna N/A GO:0005730 ... G1TUB8 41350250
    1070989 9ypz:J (2.9) BS03 rna N/A GO:0005730 ... G1TUB8 41350250
    1070990 9ypz:JJ (2.9) BS01 rna N/A GO:0003735 ... B7NZS8 41350250
    1070991 9ypz:K (2.9) BS01 rna N/A GO:0000463 ... G1TUB1 41350250
    1070992 9ypz:K (2.9) BS02 rna N/A GO:0000463 ... G1TUB1 41350250
    1070993 9ypz:KK (2.9) BS01 rna N/A GO:0003723 ... G1TPV3 41350250
    1070994 9ypz:L (2.9) BS01 rna N/A N/A N/A 41350250
    1070995 9ypz:L (2.9) BS02 rna N/A N/A N/A 41350250
    1070996 9ypz:LL (2.9) BS01 rna N/A GO:0003735 ... G1TRM4 41350250
    1070997 9ypz:M (2.9) BS01 rna N/A GO:0003723 ... G1SZ12 41350250
    1070998 9ypz:MM (2.9) BS01 rna N/A GO:0003735 ... G1SFR8 41350250
    1070999 9ypz:N (2.9) BS01 rna N/A GO:0002181 ... G1T0C1 41350250
    1071000 9ypz:N (2.9) BS02 rna N/A GO:0002181 ... G1T0C1 41350250

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).