SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1071001 9ypz:NN (2.9) BS01 rna N/A GO:0003735 ... G1SP51 41350250
    1071002 9ypz:NN (2.9) BS02 rna N/A GO:0003735 ... G1SP51 41350250
    1071003 9ypz:O (2.9) BS01 rna N/A GO:0003729 ... G1TVS8 41350250
    1071004 9ypz:OO (2.9) BS01 rna N/A GO:0003735 ... A0AAA9WYR1 41350250
    1071005 9ypz:P (2.9) BS01 rna N/A GO:0002181 ... G1SCJ6 41350250
    1071006 9ypz:P (2.9) BS02 rna N/A GO:0002181 ... G1SCJ6 41350250
    1071007 9ypz:PP (2.9) BS01 rna N/A GO:0000028 ... G1U0Q2 41350250
    1071008 9ypz:PP (2.9) BS02 rna N/A GO:0000028 ... G1U0Q2 41350250
    1071009 9ypz:Q (2.9) BS01 rna N/A GO:0003723 ... G1TFE0 41350250
    1071010 9ypz:QQ (2.9) BS01 rna N/A GO:0000462 ... G1SGX4 41350250
    1071011 9ypz:R (2.9) BS01 rna N/A GO:0022625 ... G1TJR3 41350250
    1071012 9ypz:R (2.9) BS02 rna N/A GO:0022625 ... G1TJR3 41350250
    1071013 9ypz:RR (2.9) BS01 rna N/A GO:0003735 ... G1TU13 41350250
    1071014 9ypz:S (2.9) BS01 rna N/A N/A G1TTY7 41350250
    1071015 9ypz:S (2.9) BS02 rna N/A N/A G1TTY7 41350250
    1071016 9ypz:SS (2.9) BS01 rna N/A GO:0003735 ... G1TPG3 41350250
    1071017 9ypz:SS (2.9) BS02 rna N/A GO:0003735 ... G1TPG3 41350250
    1071018 9ypz:T (2.9) BS01 rna N/A GO:0005737 ... G1SHQ2 41350250
    1071019 9ypz:T (2.9) BS02 rna N/A GO:0005737 ... G1SHQ2 41350250
    1071020 9ypz:TT (2.9) BS01 rna N/A GO:0000028 ... G1TN62 41350250
    1071021 9ypz:U (2.9) BS01 rna N/A GO:0002181 ... G1TSG1 41350250
    1071022 9ypz:UU (2.9) BS01 rna N/A GO:0003735 ... G1SIZ2 41350250
    1071023 9ypz:V (2.9) BS01 rna N/A GO:0000122 ... G1T6D1 41350250
    1071024 9ypz:W (2.9) BS01 rna N/A GO:0002181 ... G1SE28 41350250
    1071025 9ypz:W (2.9) BS02 rna N/A GO:0002181 ... G1SE28 41350250
    1071026 9ypz:WW (2.9) BS01 rna N/A GO:0003735 ... G1TG89 41350250
    1071027 9ypz:X (2.9) BS01 rna N/A GO:0005634 ... G1SE76 41350250
    1071028 9ypz:X (2.9) BS02 rna N/A GO:0005634 ... G1SE76 41350250
    1071029 9ypz:XX (2.9) BS01 rna N/A GO:0003735 ... G1SZ47 41350250
    1071030 9ypz:Y (2.9) BS01 rna N/A GO:0003735 ... G1SQH0 41350250
    1071031 9ypz:Y (2.9) BS02 rna N/A GO:0003735 ... G1SQH0 41350250
    1071032 9ypz:YY (2.9) BS01 rna N/A GO:0022627 ... G1T3D8 41350250
    1071033 9ypz:Z (2.9) BS01 rna N/A GO:0002181 ... G1TXF6 41350250
    1071034 9ypz:ZZ (2.9) BS01 rna N/A GO:0003735 ... G1TDB3 41350250
    1071035 9ypz:a (2.9) BS01 rna N/A GO:0003735 ... G1SNY0 41350250
    1071036 9ypz:aa (2.9) BS01 rna N/A GO:0003729 ... G1TFE8 41350250
    1071037 9ypz:b (2.9) BS01 rna N/A GO:0002181 ... G1SGR6 41350250
    1071038 9ypz:bb (2.9) BS01 rna N/A GO:0003735 ... G1TZ76 41350250
    1071039 9ypz:c (2.9) BS01 rna N/A GO:0005737 ... G1TDL2 41350250
    1071040 9ypz:cc (2.9) BS01 rna N/A GO:0000028 ... G1TIB4 41350250
    1071041 9ypz:d (2.9) BS01 rna N/A GO:0002181 ... G1SHG0 41350250
    1071042 9ypz:dd (2.9) BS01 rna N/A GO:0002181 ... G1U7M4 41350250
    1071043 9ypz:dd (2.9) BS02 ZN N/A GO:0002181 ... G1U7M4 41350250
    1071044 9ypz:e (2.9) BS01 rna N/A GO:0005737 ... A0AAA9WVN6 41350250
    1071045 9ypz:ee (2.9) BS01 rna N/A GO:0005634 ... G1T8A2 41350250
    1071046 9ypz:f (2.9) BS01 rna N/A GO:0005737 ... G1SF08 41350250
    1071047 9ypz:ff (2.9) BS01 rna N/A GO:0003735 ... G1SK22 41350250
    1071048 9ypz:g (2.9) BS01 rna N/A GO:0005737 ... G1TXG5 41350250
    1071049 9ypz:g (2.9) BS02 ZN N/A GO:0005737 ... G1TXG5 41350250
    1071050 9ypz:gg (2.9) BS01 rna N/A GO:0001891 ... G1SJB4 41350250
    1071051 9ypz:h (2.9) BS01 rna N/A GO:0000463 ... G1SIT5 41350250
    1071052 9ypz:h (2.9) BS02 rna N/A GO:0000463 ... G1SIT5 41350250
    1071053 9ypz:i (2.9) BS01 rna N/A GO:0005737 ... G1TTQ5 41350250
    1071054 9ypz:j (2.9) BS01 rna N/A GO:0002181 ... U3KPD5 41350250
    1071055 9ypz:j (2.9) BS02 rna N/A GO:0002181 ... U3KPD5 41350250
    1071056 9ypz:j (2.9) BS03 ZN N/A GO:0002181 ... U3KPD5 41350250
    1071057 9ypz:k (2.9) BS01 rna N/A GO:0003735 ... G1U3J0 41350250
    1071058 9ypz:l (2.9) BS01 rna N/A GO:0022625 ... G1TTN1 41350250
    1071059 9ypz:l (2.9) BS02 rna N/A GO:0022625 ... G1TTN1 41350250
    1071060 9ypz:m (2.9) BS01 rna N/A N/A A0A2K5PSA0 41350250
    1071061 9ypz:m (2.9) BS02 ZN N/A N/A A0A2K5PSA0 41350250
    1071062 9ypz:o (2.9) BS01 rna N/A N/A A0AAA9WX15 41350250
    1071063 9ypz:o (2.9) BS02 rna N/A N/A A0AAA9WX15 41350250
    1071064 9ypz:o (2.9) BS03 ZN N/A N/A A0AAA9WX15 41350250
    1071065 9ypz:o (2.9) BS04 ATP N/A N/A A0AAA9WX15 41350250
    1071066 9ypz:p (2.9) BS01 rna N/A GO:0005737 ... G1SY53 41350250
    1071067 9ypz:p (2.9) BS02 ZN N/A GO:0005737 ... G1SY53 41350250
    1071068 9ypz:r (2.9) BS01 rna N/A GO:0005737 ... G1U7L1 41350250
    1071069 9yq0:A (2.9) BS01 rna N/A GO:0002181 ... G1TT27 41350250
    1071070 9yq0:A (2.9) BS02 rna N/A GO:0002181 ... G1TT27 41350250
    1071071 9yq0:AA (2.9) BS01 rna N/A GO:0000028 ... G1TLT8 41350250
    1071072 9yq0:B (2.9) BS01 rna N/A GO:0003723 ... G1TL06 41350250
    1071073 9yq0:BB (2.9) BS01 rna N/A GO:0003735 ... G1SS70 41350250
    1071074 9yq0:C (2.9) BS01 rna N/A GO:0005737 ... G1SVW5 41350250
    1071075 9yq0:C (2.9) BS02 rna N/A GO:0005737 ... G1SVW5 41350250
    1071076 9yq0:CC (2.9) BS01 rna N/A GO:0003735 ... O18789 41350250
    1071077 9yq0:D (2.9) BS01 rna N/A GO:0000027 ... P19949 41350250
    1071078 9yq0:D (2.9) BS02 rna N/A GO:0000027 ... P19949 41350250
    1071079 9yq0:DD (2.9) BS01 rna N/A GO:0003735 ... G1TNM3 41350250
    1071080 9yq0:E (2.9) BS01 rna N/A GO:0000027 ... G1SKF7 41350250
    1071081 9yq0:EE (2.9) BS01 rna N/A GO:0003723 ... G1TK17 41350250
    1071082 9yq0:FF (2.9) BS01 rna N/A GO:0003735 ... G1TFM5 41350250
    1071083 9yq0:FF (2.9) BS02 rna N/A GO:0003735 ... G1TFM5 41350250
    1071084 9yq0:G (2.9) BS01 rna N/A GO:0005737 ... G1STW0 41350250
    1071085 9yq0:G (2.9) BS02 rna N/A GO:0005737 ... G1STW0 41350250
    1071086 9yq0:GG (2.9) BS01 rna N/A GO:0003735 ... G1TM55 41350250
    1071087 9yq0:H (2.9) BS01 rna N/A GO:0002181 ... G1SWI6 41350250
    1071088 9yq0:HH (2.9) BS01 rna N/A GO:0003735 ... G1SVB0 41350250
    1071089 9yq0:I (2.9) BS01 rna N/A GO:0005737 ... B7NZQ2 41350250
    1071090 9yq0:I (2.9) BS02 rna N/A GO:0005737 ... B7NZQ2 41350250
    1071091 9yq0:II (2.9) BS01 rna N/A GO:0003735 ... G1TJW1 41350250
    1071092 9yq0:II (2.9) BS02 rna N/A GO:0003735 ... G1TJW1 41350250
    1071093 9yq0:J (2.9) BS01 rna N/A GO:0005730 ... G1TUB8 41350250
    1071094 9yq0:J (2.9) BS02 rna N/A GO:0005730 ... G1TUB8 41350250
    1071095 9yq0:J (2.9) BS03 rna N/A GO:0005730 ... G1TUB8 41350250
    1071096 9yq0:JJ (2.9) BS01 rna N/A GO:0003735 ... B7NZS8 41350250
    1071097 9yq0:K (2.9) BS01 rna N/A GO:0000463 ... G1TUB1 41350250
    1071098 9yq0:K (2.9) BS02 rna N/A GO:0000463 ... G1TUB1 41350250
    1071099 9yq0:KK (2.9) BS01 rna N/A GO:0003723 ... G1TPV3 41350250
    1071100 9yq0:L (2.9) BS01 rna N/A N/A N/A 41350250
    1071101 9yq0:L (2.9) BS02 rna N/A N/A N/A 41350250
    1071102 9yq0:LL (2.9) BS01 rna N/A GO:0003735 ... G1TRM4 41350250
    1071103 9yq0:M (2.9) BS01 rna N/A GO:0003723 ... G1SZ12 41350250
    1071104 9yq0:MM (2.9) BS01 rna N/A GO:0003735 ... G1SFR8 41350250
    1071105 9yq0:N (2.9) BS01 rna N/A GO:0002181 ... G1T0C1 41350250
    1071106 9yq0:N (2.9) BS02 rna N/A GO:0002181 ... G1T0C1 41350250
    1071107 9yq0:NN (2.9) BS01 rna N/A GO:0003735 ... G1SP51 41350250
    1071108 9yq0:NN (2.9) BS02 rna N/A GO:0003735 ... G1SP51 41350250
    1071109 9yq0:O (2.9) BS01 rna N/A GO:0003729 ... G1TVS8 41350250
    1071110 9yq0:OO (2.9) BS01 rna N/A GO:0003735 ... A0AAA9WYR1 41350250
    1071111 9yq0:P (2.9) BS01 rna N/A GO:0002181 ... G1SCJ6 41350250
    1071112 9yq0:P (2.9) BS02 rna N/A GO:0002181 ... G1SCJ6 41350250
    1071113 9yq0:PP (2.9) BS01 rna N/A GO:0000028 ... G1U0Q2 41350250
    1071114 9yq0:PP (2.9) BS02 rna N/A GO:0000028 ... G1U0Q2 41350250
    1071115 9yq0:Q (2.9) BS01 rna N/A GO:0003723 ... G1TFE0 41350250
    1071116 9yq0:QQ (2.9) BS01 rna N/A GO:0000462 ... G1SGX4 41350250
    1071117 9yq0:R (2.9) BS01 rna N/A GO:0022625 ... G1TJR3 41350250
    1071118 9yq0:R (2.9) BS02 rna N/A GO:0022625 ... G1TJR3 41350250
    1071119 9yq0:RR (2.9) BS01 rna N/A GO:0003735 ... G1TU13 41350250
    1071120 9yq0:S (2.9) BS01 rna N/A N/A G1TTY7 41350250
    1071121 9yq0:S (2.9) BS02 rna N/A N/A G1TTY7 41350250
    1071122 9yq0:SS (2.9) BS01 rna N/A GO:0003735 ... G1TPG3 41350250
    1071123 9yq0:SS (2.9) BS02 rna N/A GO:0003735 ... G1TPG3 41350250
    1071124 9yq0:T (2.9) BS01 rna N/A GO:0005737 ... G1SHQ2 41350250
    1071125 9yq0:T (2.9) BS02 rna N/A GO:0005737 ... G1SHQ2 41350250
    1071126 9yq0:TT (2.9) BS01 rna N/A GO:0000028 ... G1TN62 41350250
    1071127 9yq0:U (2.9) BS01 rna N/A GO:0002181 ... G1TSG1 41350250
    1071128 9yq0:UU (2.9) BS01 rna N/A GO:0003735 ... G1SIZ2 41350250
    1071129 9yq0:V (2.9) BS01 rna N/A GO:0000122 ... G1T6D1 41350250
    1071130 9yq0:W (2.9) BS01 rna N/A GO:0002181 ... G1SE28 41350250
    1071131 9yq0:WW (2.9) BS01 rna N/A GO:0003735 ... G1TG89 41350250
    1071132 9yq0:X (2.9) BS01 rna N/A GO:0005634 ... G1SE76 41350250
    1071133 9yq0:X (2.9) BS02 rna N/A GO:0005634 ... G1SE76 41350250
    1071134 9yq0:XX (2.9) BS01 rna N/A GO:0003735 ... G1SZ47 41350250
    1071135 9yq0:Y (2.9) BS01 rna N/A GO:0003735 ... G1SQH0 41350250
    1071136 9yq0:Y (2.9) BS02 rna N/A GO:0003735 ... G1SQH0 41350250
    1071137 9yq0:YY (2.9) BS01 rna N/A GO:0022627 ... G1T3D8 41350250
    1071138 9yq0:Z (2.9) BS01 rna N/A GO:0002181 ... G1TXF6 41350250
    1071139 9yq0:ZZ (2.9) BS01 rna N/A GO:0003735 ... G1TDB3 41350250
    1071140 9yq0:a (2.9) BS01 rna N/A GO:0003735 ... G1SNY0 41350250
    1071141 9yq0:aa (2.9) BS01 rna N/A GO:0003729 ... G1TFE8 41350250
    1071142 9yq0:b (2.9) BS01 rna N/A GO:0002181 ... G1SGR6 41350250
    1071143 9yq0:bb (2.9) BS01 rna N/A GO:0003735 ... G1TZ76 41350250
    1071144 9yq0:c (2.9) BS01 rna N/A GO:0005737 ... G1TDL2 41350250
    1071145 9yq0:cc (2.9) BS01 rna N/A GO:0000028 ... G1TIB4 41350250
    1071146 9yq0:d (2.9) BS01 rna N/A GO:0002181 ... G1SHG0 41350250
    1071147 9yq0:dd (2.9) BS01 rna N/A GO:0002181 ... G1U7M4 41350250
    1071148 9yq0:dd (2.9) BS02 ZN N/A GO:0002181 ... G1U7M4 41350250
    1071149 9yq0:e (2.9) BS01 rna N/A GO:0005737 ... A0AAA9WVN6 41350250
    1071150 9yq0:ee (2.9) BS01 rna N/A GO:0005634 ... G1T8A2 41350250
    1071151 9yq0:f (2.9) BS01 rna N/A GO:0005737 ... G1SF08 41350250
    1071152 9yq0:ff (2.9) BS01 rna N/A GO:0003735 ... G1SK22 41350250
    1071153 9yq0:g (2.9) BS01 rna N/A GO:0005737 ... G1TXG5 41350250
    1071154 9yq0:g (2.9) BS02 ZN N/A GO:0005737 ... G1TXG5 41350250
    1071155 9yq0:gg (2.9) BS01 rna N/A GO:0001891 ... G1SJB4 41350250
    1071156 9yq0:h (2.9) BS01 rna N/A GO:0000463 ... G1SIT5 41350250
    1071157 9yq0:h (2.9) BS02 rna N/A GO:0000463 ... G1SIT5 41350250
    1071158 9yq0:i (2.9) BS01 rna N/A GO:0005737 ... G1TTQ5 41350250
    1071159 9yq0:j (2.9) BS01 rna N/A GO:0002181 ... U3KPD5 41350250
    1071160 9yq0:j (2.9) BS02 rna N/A GO:0002181 ... U3KPD5 41350250
    1071161 9yq0:j (2.9) BS03 ZN N/A GO:0002181 ... U3KPD5 41350250
    1071162 9yq0:k (2.9) BS01 rna N/A GO:0003735 ... G1U3J0 41350250
    1071163 9yq0:l (2.9) BS01 rna N/A GO:0022625 ... G1TTN1 41350250
    1071164 9yq0:l (2.9) BS02 rna N/A GO:0022625 ... G1TTN1 41350250
    1071165 9yq0:m (2.9) BS01 rna N/A N/A A0A2K5PSA0 41350250
    1071166 9yq0:m (2.9) BS02 ZN N/A N/A A0A2K5PSA0 41350250
    1071167 9yq0:o (2.9) BS01 rna N/A N/A A0AAA9WX15 41350250
    1071168 9yq0:o (2.9) BS02 rna N/A N/A A0AAA9WX15 41350250
    1071169 9yq0:o (2.9) BS03 ZN N/A N/A A0AAA9WX15 41350250
    1071170 9yq0:p (2.9) BS01 rna N/A GO:0005737 ... G1SY53 41350250
    1071171 9yq0:p (2.9) BS02 ZN N/A GO:0005737 ... G1SY53 41350250
    1071172 9yq0:r (2.9) BS01 rna N/A GO:0005737 ... G1U7L1 41350250
    1071173 9yq1:A (2.9) BS01 rna N/A GO:0002181 ... G1TT27 41350250
    1071174 9yq1:A (2.9) BS02 rna N/A GO:0002181 ... G1TT27 41350250
    1071175 9yq1:AA (2.9) BS01 rna N/A GO:0000028 ... G1TLT8 41350250
    1071176 9yq1:B (2.9) BS01 rna N/A GO:0003723 ... G1TL06 41350250
    1071177 9yq1:BB (2.9) BS01 rna N/A GO:0003735 ... G1SS70 41350250
    1071178 9yq1:C (2.9) BS01 rna N/A GO:0005737 ... G1SVW5 41350250
    1071179 9yq1:C (2.9) BS02 rna N/A GO:0005737 ... G1SVW5 41350250
    1071180 9yq1:CC (2.9) BS01 rna N/A GO:0003735 ... O18789 41350250
    1071181 9yq1:D (2.9) BS01 rna N/A GO:0000027 ... P19949 41350250
    1071182 9yq1:D (2.9) BS02 rna N/A GO:0000027 ... P19949 41350250
    1071183 9yq1:DD (2.9) BS01 rna N/A GO:0003735 ... G1TNM3 41350250
    1071184 9yq1:E (2.9) BS01 rna N/A GO:0000027 ... G1SKF7 41350250
    1071185 9yq1:EE (2.9) BS01 rna N/A GO:0003723 ... G1TK17 41350250
    1071186 9yq1:FF (2.9) BS01 rna N/A GO:0003735 ... G1TFM5 41350250
    1071187 9yq1:FF (2.9) BS02 rna N/A GO:0003735 ... G1TFM5 41350250
    1071188 9yq1:G (2.9) BS01 rna N/A GO:0005737 ... G1STW0 41350250
    1071189 9yq1:G (2.9) BS02 rna N/A GO:0005737 ... G1STW0 41350250
    1071190 9yq1:GG (2.9) BS01 rna N/A GO:0003735 ... G1TM55 41350250
    1071191 9yq1:H (2.9) BS01 rna N/A GO:0002181 ... G1SWI6 41350250
    1071192 9yq1:HH (2.9) BS01 rna N/A GO:0003735 ... G1SVB0 41350250
    1071193 9yq1:I (2.9) BS01 rna N/A GO:0005737 ... B7NZQ2 41350250
    1071194 9yq1:I (2.9) BS02 rna N/A GO:0005737 ... B7NZQ2 41350250
    1071195 9yq1:II (2.9) BS01 rna N/A GO:0003735 ... G1TJW1 41350250
    1071196 9yq1:II (2.9) BS02 rna N/A GO:0003735 ... G1TJW1 41350250
    1071197 9yq1:J (2.9) BS01 rna N/A GO:0005730 ... G1TUB8 41350250
    1071198 9yq1:J (2.9) BS02 rna N/A GO:0005730 ... G1TUB8 41350250
    1071199 9yq1:JJ (2.9) BS01 rna N/A GO:0003735 ... B7NZS8 41350250
    1071200 9yq1:K (2.9) BS01 rna N/A GO:0000463 ... G1TUB1 41350250

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).