SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1071401 9ys0:A (2.14) BS01 ADP N/A GO:0000166 ... Q8IJP3 N/A
    1071402 9ys0:A (2.14) BS02 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071403 9ys0:A (2.14) BS03 ADP N/A GO:0000166 ... Q8IJP3 N/A
    1071404 9ys0:A (2.14) BS04 ADP N/A GO:0000166 ... Q8IJP3 N/A
    1071405 9ys0:B (2.14) BS01 ADP N/A GO:0000166 ... Q8IJP3 N/A
    1071406 9ys0:B (2.14) BS02 ADP N/A GO:0000166 ... Q8IJP3 N/A
    1071407 9ys0:B (2.14) BS03 ADP N/A GO:0000166 ... Q8IJP3 N/A
    1071408 9ys0:B (2.14) BS04 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071409 9ys1:A (2.34) BS01 CYS N/A GO:0000166 ... Q8IJP3 N/A
    1071410 9ys1:A (2.34) BS02 AMP N/A GO:0000166 ... Q8IJP3 N/A
    1071411 9ys1:A (2.34) BS03 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071412 9ys1:A (2.34) BS04 AMP N/A GO:0000166 ... Q8IJP3 N/A
    1071413 9ys1:A (2.34) BS05 AMP N/A GO:0000166 ... Q8IJP3 N/A
    1071414 9ys1:B (2.34) BS01 AMP N/A GO:0000166 ... Q8IJP3 N/A
    1071415 9ys1:B (2.34) BS02 AMP N/A GO:0000166 ... Q8IJP3 N/A
    1071416 9ys1:B (2.34) BS03 CYS N/A GO:0000166 ... Q8IJP3 N/A
    1071417 9ys1:B (2.34) BS04 AMP N/A GO:0000166 ... Q8IJP3 N/A
    1071418 9ys1:B (2.34) BS05 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071419 9ys2:A (2.22) BS01 A1CYZ N/A GO:0000166 ... Q8IJP3 N/A
    1071420 9ys2:A (2.22) BS02 ATP N/A GO:0000166 ... Q8IJP3 N/A
    1071421 9ys2:A (2.22) BS03 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071422 9ys2:B (2.22) BS01 ATP N/A GO:0000166 ... Q8IJP3 N/A
    1071423 9ys2:B (2.22) BS02 ATP N/A GO:0000166 ... Q8IJP3 N/A
    1071424 9ys2:B (2.22) BS03 A1CYZ N/A GO:0000166 ... Q8IJP3 N/A
    1071425 9ys2:B (2.22) BS04 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071426 9yt0:A (2.45) BS01 ADP N/A N/A Q8IJP3 N/A
    1071427 9yt0:A (2.45) BS02 ADP N/A N/A Q8IJP3 N/A
    1071428 9yt0:A (2.45) BS03 ADP N/A N/A Q8IJP3 N/A
    1071429 9yt0:A (2.45) BS04 ZN N/A N/A Q8IJP3 N/A
    1071430 9yt0:B (2.45) BS01 ADP N/A N/A Q8IJP3 N/A
    1071431 9yt0:B (2.45) BS02 ADP N/A N/A Q8IJP3 N/A
    1071432 9yt0:B (2.45) BS03 ADP N/A N/A Q8IJP3 N/A
    1071433 9yt0:B (2.45) BS04 ZN N/A N/A Q8IJP3 N/A
    1071434 9yt2:A (2.8) BS01 ATP N/A GO:0000166 ... Q8IJP3 N/A
    1071435 9yt2:A (2.8) BS02 ATP N/A GO:0000166 ... Q8IJP3 N/A
    1071436 9yt2:A (2.8) BS03 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071437 9yt2:A (2.8) BS04 ATP N/A GO:0000166 ... Q8IJP3 N/A
    1071438 9yt2:B (2.8) BS01 ATP N/A GO:0000166 ... Q8IJP3 N/A
    1071439 9yt2:B (2.8) BS02 ATP N/A GO:0000166 ... Q8IJP3 N/A
    1071440 9yt2:B (2.8) BS03 ATP N/A GO:0000166 ... Q8IJP3 N/A
    1071441 9yt2:B (2.8) BS04 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071442 9yt3:A (2.77) BS01 LMS N/A GO:0000166 ... Q8IJP3 N/A
    1071443 9yt3:A (2.77) BS02 LMS N/A GO:0000166 ... Q8IJP3 N/A
    1071444 9yt3:A (2.77) BS03 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071445 9yt3:B (2.77) BS01 LMS N/A GO:0000166 ... Q8IJP3 N/A
    1071446 9yt3:B (2.77) BS02 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071447 9yt5:A (2.9) BS01 5GP N/A GO:0000166 ... Q8IJP3 N/A
    1071448 9yt5:A (2.9) BS02 5GP N/A GO:0000166 ... Q8IJP3 N/A
    1071449 9yt5:A (2.9) BS03 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071450 9yt5:B (2.9) BS01 5GP N/A GO:0000166 ... Q8IJP3 N/A
    1071451 9yt5:B (2.9) BS02 5GP N/A GO:0000166 ... Q8IJP3 N/A
    1071452 9yt5:B (2.9) BS03 ZN N/A GO:0000166 ... Q8IJP3 N/A
    1071453 9ytd:A (2.5) BS01 peptide N/A N/A A5I8L1 41332722
    1071454 9ytd:H (2.5) BS01 peptide N/A N/A N/A 41332722
    1071455 9ytf:A (2.6) BS01 peptide N/A GO:0000139 ... A0A1D3TZM3 41332722
    1071456 9ytf:F (2.6) BS01 peptide N/A N/A N/A 41332722
    1071457 9ytu:A (2.51) BS01 A1BXY N/A N/A Q6VPE5 N/A
    1071458 9ytu:C (2.51) BS01 A1BXY N/A N/A Q6VPE5 N/A
    1071459 9yty:A (2.25) BS01 GG5 N/A GO:0000165 ... Q16539 N/A
    1071460 9yty:A (2.25) BS02 A1BB6 N/A GO:0000165 ... Q16539 N/A
    1071461 9ytz:E (2.85) BS01 peptide N/A N/A P52293 N/A
    1071462 9yud:A (2.7) BS01 X5W N/A N/A Q13370 41331906
    1071463 9yud:A (2.7) BS02 MG N/A N/A Q13370 41331906
    1071464 9yud:B (2.7) BS01 MG N/A N/A Q13370 41331906
    1071465 9yud:B (2.7) BS02 MG N/A N/A Q13370 41331906
    1071466 9yv3:A (2.25) BS01 IUO N/A GO:0000139 ... P24280 N/A
    1071467 9yv4:A (1.6) BS01 A1CY9 N/A N/A Q9Y4B6 40683980
    1071468 9yv4:B (1.6) BS01 A1CY9 N/A N/A Q9Y4B6 40683980
    1071469 9yv5:A (2.28) BS01 HEM N/A GO:0004508 ... F2K081 41789186
    1071470 9yvv:A (2.32) BS01 HEM N/A GO:0004508 ... F2K081 41789186
    1071471 9yvv:A (2.32) BS02 Y8I N/A GO:0004508 ... F2K081 41789186
    1071472 9yvv:A (2.32) BS03 Y8I N/A GO:0004508 ... F2K081 41789186
    1071473 9yx0:A (2.0) BS01 BTN N/A GO:0000166 ... A0R1D8 N/A
    1071474 9yx0:D (2.0) BS01 BTN N/A GO:0000166 ... A0R1D8 N/A
    1071475 9yx0:G (2.0) BS01 BTN N/A GO:0004485 ... A0R1D9 N/A
    1071476 9yx0:H (2.0) BS01 BTN N/A GO:0004485 ... A0R1D9 N/A
    1071477 9yx0:I (2.0) BS01 BTN N/A GO:0004485 ... A0R1D9 N/A
    1071478 9yx0:I (2.0) BS02 BTN N/A GO:0004485 ... A0R1D9 N/A
    1071479 9yx0:J (2.0) BS01 BTN N/A GO:0004485 ... A0R1D9 N/A
    1071480 9yx0:J (2.0) BS02 BTN N/A GO:0004485 ... A0R1D9 N/A
    1071481 9yx0:K (2.0) BS01 BTN N/A GO:0004485 ... A0R1D9 N/A
    1071482 9yx0:L (2.0) BS01 BTN N/A GO:0004485 ... A0R1D9 N/A
    1071483 9yx1:A (3.5) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071484 9yx1:A (3.5) BS02 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071485 9yx1:G (3.5) BS01 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071486 9yx1:H (3.5) BS01 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071487 9yx1:H (3.5) BS02 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071488 9yx1:M (3.5) BS01 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071489 9yx1:M (3.5) BS02 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071490 9yx1:N (3.5) BS01 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071491 9yx1:N (3.5) BS02 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071492 9yx1:Q (3.5) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071493 9yx1:Q (3.5) BS02 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071494 9yx2:A (2.8) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071495 9yx2:A (2.8) BS02 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071496 9yx2:A (2.8) BS03 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071497 9yx2:B (2.8) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071498 9yx2:B (2.8) BS02 MG N/A GO:0000166 ... A0QTE1 N/A
    1071499 9yx2:B (2.8) BS03 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071500 9yx2:C (2.8) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071501 9yx2:D (2.8) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071502 9yx2:D (2.8) BS02 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071503 9yx2:G (2.8) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071504 9yx2:G (2.8) BS02 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071505 9yx2:H (2.8) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071506 9yx2:H (2.8) BS02 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071507 9yx2:H (2.8) BS03 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071508 9yx2:J (2.8) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071509 9yx2:K (2.8) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071510 9yx2:L (2.8) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071511 9yx2:M (2.8) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071512 9yx2:M (2.8) BS02 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071513 9yx2:M (2.8) BS03 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071514 9yx2:N (2.8) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071515 9yx2:N (2.8) BS02 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071516 9yx2:Q (2.8) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071517 9yx2:Q (2.8) BS02 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071518 9yx2:Q (2.8) BS03 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071519 9yx2:Q (2.8) BS04 MG N/A GO:0000166 ... A0QTE1 N/A
    1071520 9yx2:R (2.8) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071521 9yx2:R (2.8) BS02 MG N/A GO:0000166 ... A0QTE1 N/A
    1071522 9yx2:R (2.8) BS03 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071523 9yx2:S (2.8) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071524 9yx2:S (2.8) BS02 MG N/A GO:0000166 ... A0QTE1 N/A
    1071525 9yx2:S (2.8) BS03 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071526 9yx2:T (2.8) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071527 9yx2:T (2.8) BS02 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071528 9yx2:T (2.8) BS03 MG N/A GO:0000166 ... A0QTE1 N/A
    1071529 9yx4:A (2.3) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071530 9yx4:A (2.3) BS02 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071531 9yx4:A (2.3) BS03 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071532 9yx4:A (2.3) BS04 MG N/A GO:0000166 ... A0QTE1 N/A
    1071533 9yx4:B (2.3) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071534 9yx4:B (2.3) BS02 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071535 9yx4:C (2.3) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071536 9yx4:C (2.3) BS02 MG N/A GO:0000166 ... A0QTE1 N/A
    1071537 9yx4:C (2.3) BS03 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071538 9yx4:D (2.3) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071539 9yx4:D (2.3) BS02 MG N/A GO:0000166 ... A0QTE1 N/A
    1071540 9yx4:D (2.3) BS03 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071541 9yx4:F (2.3) BS01 A1CZD N/A GO:0004658 ... A0R616 N/A
    1071542 9yx4:F (2.3) BS02 A1CZD N/A GO:0004658 ... A0R616 N/A
    1071543 9yx4:G (2.3) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071544 9yx4:G (2.3) BS02 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071545 9yx4:H (2.3) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071546 9yx4:H (2.3) BS02 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071547 9yx4:H (2.3) BS03 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071548 9yx4:I (2.3) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071549 9yx4:J (2.3) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071550 9yx4:K (2.3) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071551 9yx4:L (2.3) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071552 9yx4:M (2.3) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071553 9yx4:M (2.3) BS02 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071554 9yx4:N (2.3) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071555 9yx4:N (2.3) BS02 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071556 9yx4:O (2.3) BS01 A1CZD N/A GO:0004658 ... A0R616 N/A
    1071557 9yx4:O (2.3) BS02 A1CZD N/A GO:0004658 ... A0R616 N/A
    1071558 9yx4:Q (2.3) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071559 9yx4:Q (2.3) BS02 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071560 9yx4:Q (2.3) BS03 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071561 9yx4:Q (2.3) BS04 MG N/A GO:0000166 ... A0QTE1 N/A
    1071562 9yx4:R (2.3) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071563 9yx4:R (2.3) BS02 MG N/A GO:0000166 ... A0QTE1 N/A
    1071564 9yx4:R (2.3) BS03 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071565 9yx4:S (2.3) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071566 9yx4:S (2.3) BS02 MG N/A GO:0000166 ... A0QTE1 N/A
    1071567 9yx4:S (2.3) BS03 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071568 9yx4:T (2.3) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071569 9yx4:T (2.3) BS02 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071570 9yx4:T (2.3) BS03 MG N/A GO:0000166 ... A0QTE1 N/A
    1071571 9yx5:F (2.9) BS01 A1CZD N/A GO:0004658 ... A0R616 N/A
    1071572 9yx5:F (2.9) BS02 A1CZD N/A GO:0004658 ... A0R616 N/A
    1071573 9yx5:G (2.9) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071574 9yx5:G (2.9) BS02 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071575 9yx5:H (2.9) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071576 9yx5:H (2.9) BS02 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071577 9yx5:M (2.9) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071578 9yx5:M (2.9) BS02 BTN N/A GO:0003989 ... A0QTE7 N/A
    1071579 9yx5:N (2.9) BS01 1VU N/A GO:0003989 ... A0QTE7 N/A
    1071580 9yx5:O (2.9) BS01 A1CZD N/A GO:0004658 ... A0R616 N/A
    1071581 9yx5:O (2.9) BS02 A1CZD N/A GO:0004658 ... A0R616 N/A
    1071582 9yx5:Q (2.9) BS01 BTN N/A GO:0000166 ... A0QTE1 N/A
    1071583 9yx5:Q (2.9) BS02 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071584 9yx5:Q (2.9) BS03 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071585 9yx5:Q (2.9) BS04 MG N/A GO:0000166 ... A0QTE1 N/A
    1071586 9yx5:R (2.9) BS01 ATP N/A GO:0000166 ... A0QTE1 N/A
    1071587 9yx5:R (2.9) BS02 MG N/A GO:0000166 ... A0QTE1 N/A
    1071588 9yx5:R (2.9) BS03 BCT N/A GO:0000166 ... A0QTE1 N/A
    1071589 9yx5:V (2.9) BS01 BTN N/A N/A A0QPL0 N/A
    1071590 9yx5:Y (2.9) BS01 BTN N/A N/A A0QPL0 N/A
    1071591 9yxq:1 (3.39) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1071592 9yxq:2 (3.39) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1071593 9yxq:2 (3.39) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1071594 9yxq:3 (3.39) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1071595 9yxq:4 (3.39) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1071596 9yxq:4 (3.39) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1071597 9yxq:5 (3.39) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1071598 9yxq:5 (3.39) BS02 MG N/A GO:0000226 ... P02554 N/A
    1071599 9yxq:5 (3.39) BS03 TA1 N/A GO:0000226 ... P02554 N/A
    1071600 9yxq:6 (3.39) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).