SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1071601 9yxq:6 (3.39) BS02 MG N/A GO:0000226 ... Q2XVP4 N/A
    1071602 9yxq:7 (3.39) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1071603 9yxq:7 (3.39) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1071604 9yxq:8 (3.39) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1071605 9yxq:8 (3.39) BS02 MG N/A GO:0000226 ... Q2XVP4 N/A
    1071606 9yxq:A (3.39) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1071607 9yxq:B (3.39) BS01 GDP N/A GO:0000226 ... P02554 N/A
    1071608 9yxq:B (3.39) BS02 TA1 N/A GO:0000226 ... P02554 N/A
    1071609 9yxq:a (3.39) BS01 GTP N/A GO:0000226 ... Q2XVP4 N/A
    1071610 9yxq:b (3.39) BS01 TA1 N/A GO:0000226 ... P02554 N/A
    1071611 9yxq:b (3.39) BS02 GDP N/A GO:0000226 ... P02554 N/A
    1071612 9yy4:A (2.35) BS01 peptide N/A GO:0005737 ... P52293 N/A
    1071613 9yz4:F (4.26) BS01 BCT N/A N/A N/A N/A
    1071614 9yz4:F (4.26) BS02 FE N/A N/A N/A N/A
    1071615 9yz5:A (2.58) BS01 FPP N/A N/A Q9BVA6 41779785
    1071616 9yz5:B (2.58) BS01 FPP N/A N/A Q9BVA6 41779785
    1071617 9yza:C (3.05) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071618 9yza:C (3.05) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071619 9yza:C (3.05) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071620 9yzb:C (4.13) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071621 9yzb:C (4.13) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071622 9yzb:C (4.13) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071623 9yzc:C (3.16) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071624 9yzc:C (3.16) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071625 9yzd:C (3.09) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071626 9yzd:C (3.09) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071627 9yzd:C (3.09) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071628 9yze:C (4.07) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071629 9yze:C (4.07) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071630 9yze:C (4.07) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071631 9yzf:C (3.07) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071632 9yzf:C (3.07) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071633 9yzf:C (3.07) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071634 9yzg:C (3.09) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071635 9yzg:C (3.09) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071636 9yzg:C (3.09) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071637 9yzi:C (4.0) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071638 9yzi:C (4.0) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071639 9yzj:C (2.97) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071640 9yzj:C (2.97) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071641 9yzj:C (2.97) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071642 9yzk:C (5.1) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071643 9yzk:C (5.1) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071644 9yzk:C (5.1) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071645 9yzl:C (3.02) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071646 9yzl:C (3.02) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071647 9yzl:C (3.02) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071648 9yzl:D (3.02) BS01 dna N/A N/A P06602 N/A
    1071649 9yzl:D (3.02) BS02 dna N/A N/A P06602 N/A
    1071650 9yzm:C (3.07) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071651 9yzm:C (3.07) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071652 9yzm:C (3.07) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071653 9yzm:D (3.07) BS01 dna N/A N/A P06602 N/A
    1071654 9yzm:D (3.07) BS02 dna N/A N/A P06602 N/A
    1071655 9yzm:E (3.07) BS01 dna N/A N/A P06602 N/A
    1071656 9yzm:E (3.07) BS02 dna N/A N/A P06602 N/A
    1071657 9yzn:C (3.16) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071658 9yzn:C (3.16) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071659 9yzn:C (3.16) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071660 9yzn:D (3.16) BS01 dna N/A N/A P06602 N/A
    1071661 9yzn:D (3.16) BS02 dna N/A N/A P06602 N/A
    1071662 9yzn:E (3.16) BS01 dna N/A N/A P06602 N/A
    1071663 9yzo:C (2.96) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071664 9yzo:C (2.96) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071665 9yzo:D (2.96) BS01 dna N/A N/A P06602 N/A
    1071666 9yzo:D (2.96) BS02 dna N/A N/A P06602 N/A
    1071667 9yzo:E (2.96) BS01 dna N/A N/A P06602 N/A
    1071668 9yzp:C (3.67) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071669 9yzp:C (3.67) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071670 9yzp:C (3.67) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071671 9yzp:D (3.67) BS01 dna N/A N/A P83949 N/A
    1071672 9yzq:C (3.75) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071673 9yzq:C (3.75) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071674 9yzq:C (3.75) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071675 9yzq:D (3.75) BS01 dna N/A GO:0006091 ... P02836 N/A
    1071676 9yzr:C (3.39) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071677 9yzr:C (3.39) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071678 9yzr:D (3.39) BS01 dna N/A N/A P83949 N/A
    1071679 9yzr:E (3.39) BS01 dna N/A N/A P83949 N/A
    1071680 9yzs:C (3.08) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071681 9yzs:C (3.08) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071682 9yzs:C (3.08) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071683 9yzs:D (3.08) BS01 dna N/A N/A P06602 N/A
    1071684 9yzs:D (3.08) BS02 dna N/A N/A P06602 N/A
    1071685 9yzs:E (3.08) BS01 dna N/A N/A P06602 N/A
    1071686 9yzs:E (3.08) BS02 dna N/A N/A P06602 N/A
    1071687 9yzt:C (3.3) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071688 9yzt:C (3.3) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071689 9yzt:C (3.3) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071690 9yzt:D (3.3) BS01 dna N/A N/A P02833 N/A
    1071691 9yzt:D (3.3) BS02 dna N/A N/A P02833 N/A
    1071692 9yzt:E (3.3) BS01 dna N/A N/A P02833 N/A
    1071693 9yzu:C (3.05) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071694 9yzu:C (3.05) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071695 9yzz:H (2.42) BS01 A1CZS N/A N/A N/A 41471083
    1071696 9yzz:L (2.42) BS01 CO N/A N/A N/A 41471083
    1071697 9z08:C (4.22) BS01 dna N/A N/A P03856 N/A
    1071698 9z08:C (4.22) BS02 dna N/A N/A P03856 N/A
    1071699 9z08:C (4.22) BS03 MG N/A N/A P03856 N/A
    1071700 9z0c:A (1.9) BS01 A1CZV N/A N/A P0DTD1 41629155
    1071701 9z0d:A (1.65) BS01 ZN N/A N/A P0DTD1 41629155
    1071702 9z0d:A (1.65) BS02 A1CZW N/A N/A P0DTD1 41629155
    1071703 9z0d:B (1.65) BS01 ZN N/A N/A P0DTD1 41629155
    1071704 9z0d:B (1.65) BS02 A1CZW N/A N/A P0DTD1 41629155
    1071705 9z0d:C (1.65) BS01 ZN N/A N/A P0DTD1 41629155
    1071706 9z0d:C (1.65) BS02 A1CZW N/A N/A P0DTD1 41629155
    1071707 9z0d:D (1.65) BS01 ZN N/A N/A P0DTD1 41629155
    1071708 9z0d:D (1.65) BS02 A1CZW N/A N/A P0DTD1 41629155
    1071709 9z0f:A (2.46) BS01 BMA N/A N/A N/A 41471083
    1071710 9z0f:A (2.46) BS02 A1CZS N/A N/A N/A 41471083
    1071711 9z0f:B (2.46) BS01 BMA N/A N/A N/A 41471083
    1071712 9z0f:B (2.46) BS02 A1CZS N/A N/A N/A 41471083
    1071713 9z0f:B (2.46) BS03 A1CZS N/A N/A N/A 41471083
    1071714 9z1a:C (3.102) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071715 9z1a:C (3.102) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071716 9z1a:C (3.102) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071717 9z1b:C (3.88) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071718 9z1b:C (3.88) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071719 9z1b:C (3.88) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071720 9z1c:C (3.04) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071721 9z1c:C (3.04) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071722 9z1c:C (3.04) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071723 9z1d:C (3.06) BS01 dna N/A GO:0071897 ... P03856 N/A
    1071724 9z1d:C (3.06) BS02 dna N/A GO:0071897 ... P03856 N/A
    1071725 9z1d:C (3.06) BS03 MG N/A GO:0071897 ... P03856 N/A
    1071726 9z1l:A (1.543) BS01 A1CZZ N/A N/A N/A 41807293
    1071727 9z28:A (2.15) BS01 A1C0G N/A GO:0004454 ... P50053 41433313
    1071728 9z28:B (2.15) BS01 A1C0G N/A GO:0004454 ... P50053 41433313
    1071729 9z29:A (1.97) BS01 A1C0I N/A GO:0004454 ... P50053 41433313
    1071730 9z29:A (1.97) BS02 FRU N/A GO:0004454 ... P50053 41433313
    1071731 9z29:B (1.97) BS01 A1C0I N/A GO:0004454 ... P50053 41433313
    1071732 9z2a:A (2.0) BS01 A1C0K N/A GO:0004454 ... P50053 41433313
    1071733 9z2a:A (2.0) BS02 FRU N/A GO:0004454 ... P50053 41433313
    1071734 9z2a:B (2.0) BS01 A1C0K N/A GO:0004454 ... P50053 41433313
    1071735 9z2b:A (2.11) BS01 A1C0J N/A GO:0004454 ... P50053 41433313
    1071736 9z2b:B (2.11) BS01 A1C0J N/A GO:0004454 ... P50053 41433313
    1071737 9z2c:A (2.02) BS01 A1C0H N/A GO:0004454 ... P50053 41433313
    1071738 9z2c:A (2.02) BS02 FRU N/A GO:0004454 ... P50053 41433313
    1071739 9z2c:B (2.02) BS01 A1C0H N/A GO:0004454 ... P50053 41433313
    1071740 9z2d:A (2.6) BS01 ADP N/A GO:0004111 ... P12532 41542558
    1071741 9z2d:A (2.6) BS02 CRN N/A GO:0004111 ... P12532 41542558
    1071742 9z2d:A (2.6) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071743 9z2d:A (2.6) BS04 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071744 9z2d:B (2.6) BS01 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071745 9z2d:B (2.6) BS02 ADP N/A GO:0004111 ... P12532 41542558
    1071746 9z2d:B (2.6) BS03 CRN N/A GO:0004111 ... P12532 41542558
    1071747 9z2d:B (2.6) BS04 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071748 9z2d:C (2.6) BS01 ADP N/A GO:0004111 ... P12532 41542558
    1071749 9z2d:C (2.6) BS02 CRN N/A GO:0004111 ... P12532 41542558
    1071750 9z2d:C (2.6) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071751 9z2d:C (2.6) BS04 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071752 9z2d:D (2.6) BS01 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071753 9z2d:D (2.6) BS02 ADP N/A GO:0004111 ... P12532 41542558
    1071754 9z2d:D (2.6) BS03 CRN N/A GO:0004111 ... P12532 41542558
    1071755 9z2d:D (2.6) BS04 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071756 9z2d:E (2.6) BS01 ADP N/A GO:0004111 ... P12532 41542558
    1071757 9z2d:E (2.6) BS02 CRN N/A GO:0004111 ... P12532 41542558
    1071758 9z2d:E (2.6) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071759 9z2d:E (2.6) BS04 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071760 9z2d:F (2.6) BS01 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071761 9z2d:F (2.6) BS02 ADP N/A GO:0004111 ... P12532 41542558
    1071762 9z2d:F (2.6) BS03 CRN N/A GO:0004111 ... P12532 41542558
    1071763 9z2d:F (2.6) BS04 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071764 9z2d:G (2.6) BS01 ADP N/A GO:0004111 ... P12532 41542558
    1071765 9z2d:G (2.6) BS02 CRN N/A GO:0004111 ... P12532 41542558
    1071766 9z2d:G (2.6) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071767 9z2d:G (2.6) BS04 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071768 9z2d:H (2.6) BS01 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071769 9z2d:H (2.6) BS02 ADP N/A GO:0004111 ... P12532 41542558
    1071770 9z2d:H (2.6) BS03 CRN N/A GO:0004111 ... P12532 41542558
    1071771 9z2d:H (2.6) BS04 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071772 9z2f:A (2.59) BS01 ADP N/A GO:0004111 ... P12532 41542558
    1071773 9z2f:A (2.59) BS02 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071774 9z2f:A (2.59) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071775 9z2f:B (2.59) BS01 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071776 9z2f:B (2.59) BS02 ADP N/A GO:0004111 ... P12532 41542558
    1071777 9z2f:B (2.59) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071778 9z2f:C (2.59) BS01 ADP N/A GO:0004111 ... P12532 41542558
    1071779 9z2f:C (2.59) BS02 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071780 9z2f:C (2.59) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071781 9z2f:D (2.59) BS01 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071782 9z2f:D (2.59) BS02 ADP N/A GO:0004111 ... P12532 41542558
    1071783 9z2f:D (2.59) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071784 9z2f:E (2.59) BS01 ADP N/A GO:0004111 ... P12532 41542558
    1071785 9z2f:E (2.59) BS02 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071786 9z2f:E (2.59) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071787 9z2f:F (2.59) BS01 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071788 9z2f:F (2.59) BS02 ADP N/A GO:0004111 ... P12532 41542558
    1071789 9z2f:F (2.59) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071790 9z2f:G (2.59) BS01 ADP N/A GO:0004111 ... P12532 41542558
    1071791 9z2f:G (2.59) BS02 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071792 9z2f:G (2.59) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071793 9z2f:H (2.59) BS01 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071794 9z2f:H (2.59) BS02 ADP N/A GO:0004111 ... P12532 41542558
    1071795 9z2f:H (2.59) BS03 A1CZQ N/A GO:0004111 ... P12532 41542558
    1071796 9z2s:A (2.1) BS01 A1CZ3 N/A N/A N/A 41807293
    1071797 9z2y:B (2.65) BS01 ATP N/A GO:0004818 ... Q9Z7Z3 N/A
    1071798 9z2z:A (2.8) BS01 GSU N/A GO:0004818 ... Q9Z7Z3 N/A
    1071799 9z2z:B (2.8) BS01 GSU N/A GO:0004818 ... Q9Z7Z3 N/A
    1071800 9z32:A (2.83) BS01 ATP N/A N/A Q9UBL9 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).