SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1072201 9zng:BO (2.06) BS01 rna N/A GO:0003735 ... Q8TRR2 N/A
    1072202 9zng:BP (2.06) BS01 rna N/A GO:0002181 ... Q8TRT3 N/A
    1072203 9zng:BP (2.06) BS02 ZN N/A GO:0002181 ... Q8TRT3 N/A
    1072204 9zng:BQ (2.06) BS01 rna N/A GO:0000462 ... Q8TS56 N/A
    1072205 9zng:BR (2.06) BS01 rna N/A GO:0003735 ... Q8TRT8 N/A
    1072206 9zng:BR (2.06) BS02 ZN N/A GO:0003735 ... Q8TRT8 N/A
    1072207 9zng:BS (2.06) BS01 rna N/A GO:0003735 ... Q8THP2 N/A
    1072208 9zng:BT (2.06) BS01 rna N/A GO:0003735 ... Q8TRU3 N/A
    1072209 9zng:BU (2.06) BS01 rna N/A GO:0000028 ... A0A832W9Q0 N/A
    1072210 9zng:BV (2.06) BS01 rna N/A N/A A0A832S8D7 N/A
    1072211 9zng:BV (2.06) BS02 ZN N/A N/A A0A832S8D7 N/A
    1072212 9zng:BV (2.06) BS03 ZN N/A N/A A0A832S8D7 N/A
    1072213 9zng:BW (2.06) BS01 rna N/A GO:0002181 ... Q8TJT2 N/A
    1072214 9zng:BX (2.06) BS01 rna N/A GO:0003735 ... P61931 N/A
    1072215 9zng:BX (2.06) BS02 ZN N/A GO:0003735 ... P61931 N/A
    1072216 9zng:BY (2.06) BS01 rna N/A GO:0000028 ... Q8TQL8 N/A
    1072217 9zng:BZ (2.06) BS01 rna N/A N/A A0A832SMB7 N/A
    1072218 9zni:6 (2.89) BS01 rna N/A N/A A0A832SGR1 N/A
    1072219 9zni:7 (2.89) BS01 rna N/A N/A Q8TH71 N/A
    1072220 9zni:AA (2.89) BS01 rna N/A GO:0002181 ... Q8TRU4 N/A
    1072221 9zni:AB (2.89) BS01 rna N/A GO:0003723 ... Q8TRU7 N/A
    1072222 9zni:AB (2.89) BS02 MG N/A GO:0003723 ... Q8TRU7 N/A
    1072223 9zni:AC (2.89) BS01 rna N/A GO:0003723 ... Q8TRU6 N/A
    1072224 9zni:AD (2.89) BS01 rna N/A GO:0000049 ... Q8TRT4 N/A
    1072225 9zni:AD (2.89) BS02 rna N/A GO:0000049 ... Q8TRT4 N/A
    1072226 9zni:AE (2.89) BS01 rna N/A GO:0002181 ... Q8TRT1 N/A
    1072227 9zni:AF (2.89) BS01 rna N/A GO:0001682 ... Q8TQL9 N/A
    1072228 9zni:AG (2.89) BS01 rna N/A GO:0003729 ... Q8TT43 N/A
    1072229 9zni:AH (2.89) BS01 rna N/A GO:0003735 ... Q8TRT7 N/A
    1072230 9zni:AI (2.89) BS01 rna N/A GO:0003735 ... Q8TRS5 N/A
    1072231 9zni:AJ (2.89) BS01 rna N/A GO:0002181 ... Q8TPX0 N/A
    1072232 9zni:AK (2.89) BS01 rna N/A GO:0003735 ... Q8TU90 N/A
    1072233 9zni:AK (2.89) BS02 rna N/A GO:0003735 ... Q8TU90 N/A
    1072234 9zni:AL (2.89) BS01 rna N/A GO:0000027 ... Q8TRS8 N/A
    1072235 9zni:AL (2.89) BS02 rna N/A GO:0000027 ... Q8TRS8 N/A
    1072236 9zni:AM (2.89) BS01 rna N/A GO:0002181 ... Q8TT44 N/A
    1072237 9zni:AN (2.89) BS01 rna N/A GO:0006412 ... A0A832W9G6 N/A
    1072238 9zni:AO (2.89) BS01 rna N/A GO:0006412 ... Q8TIN5 N/A
    1072239 9zni:AP (2.89) BS01 rna N/A GO:0003735 ... Q8TQU3 N/A
    1072240 9zni:AP (2.89) BS02 rna N/A GO:0003735 ... Q8TQU3 N/A
    1072241 9zni:AQ (2.89) BS01 rna N/A GO:0002181 ... Q8TRU2 N/A
    1072242 9zni:AR (2.89) BS01 rna N/A GO:0006412 ... Q8TRU5 N/A
    1072243 9zni:AS (2.89) BS01 rna N/A GO:0002181 ... Q8TRT6 N/A
    1072244 9zni:AT (2.89) BS01 rna N/A GO:0006412 ... Q8TQL7 N/A
    1072245 9zni:AT (2.89) BS02 ZN N/A GO:0006412 ... Q8TQL7 N/A
    1072246 9zni:AU (2.89) BS01 rna N/A GO:0006412 ... Q8TRU0 N/A
    1072247 9zni:AV (2.89) BS01 rna N/A GO:0000463 ... Q8TRS6 N/A
    1072248 9zni:AV (2.89) BS02 rna N/A GO:0000463 ... Q8TRS6 N/A
    1072249 9zni:AW (2.89) BS01 rna N/A GO:0003723 ... Q8TRB9 N/A
    1072250 9zni:AX (2.89) BS01 rna N/A GO:0002181 ... Q8TIN3 N/A
    1072251 9zni:AY (2.89) BS01 rna N/A GO:0006412 ... Q8TRT0 N/A
    1072252 9zni:AZ (2.89) BS01 rna N/A GO:0006412 ... Q8TL48 N/A
    1072253 9zni:AZ (2.89) BS02 ZN N/A GO:0006412 ... Q8TL48 N/A
    1072254 9zni:Aa (2.89) BS01 rna N/A GO:0002181 ... Q8TIN2 N/A
    1072255 9zni:Ab (2.89) BS01 rna N/A GO:0006412 ... Q8TJ19 N/A
    1072256 9zni:Ab (2.89) BS02 ZN N/A GO:0006412 ... Q8TJ19 N/A
    1072257 9zni:Ac (2.89) BS01 rna N/A GO:0006412 ... A0A832W9V9 N/A
    1072258 9zni:Ac (2.89) BS02 ZN N/A GO:0006412 ... A0A832W9V9 N/A
    1072259 9zni:Ad (2.89) BS01 rna N/A GO:0006412 ... A0A832SMV9 N/A
    1072260 9zni:Ad (2.89) BS02 rna N/A GO:0006412 ... A0A832SMV9 N/A
    1072261 9zni:Ad (2.89) BS03 ZN N/A GO:0006412 ... A0A832SMV9 N/A
    1072262 9zni:BA (2.89) BS01 rna N/A GO:0003735 ... Q8TKI9 N/A
    1072263 9zni:BB (2.89) BS01 rna N/A GO:0000028 ... Q8TT39 N/A
    1072264 9zni:BC (2.89) BS01 rna N/A GO:0003735 ... Q8TRU1 N/A
    1072265 9zni:BD (2.89) BS01 rna N/A GO:0003735 ... Q8TRR1 N/A
    1072266 9zni:BE (2.89) BS01 rna N/A GO:0003723 ... Q8TRT5 N/A
    1072267 9zni:BF (2.89) BS01 rna N/A GO:0003735 ... Q8TRS7 N/A
    1072268 9zni:BF (2.89) BS02 ZN N/A GO:0003735 ... Q8TRS7 N/A
    1072269 9zni:BG (2.89) BS01 rna N/A GO:0006412 ... Q8TQL4 N/A
    1072270 9zni:BH (2.89) BS01 rna N/A GO:0003729 ... Q8TRC2 N/A
    1072271 9zni:BI (2.89) BS01 rna N/A GO:0003735 ... Q8TRT2 N/A
    1072272 9zni:BJ (2.89) BS01 rna N/A GO:0000462 ... Q8TT42 N/A
    1072273 9zni:BK (2.89) BS01 rna N/A GO:0002181 ... Q8TS82 N/A
    1072274 9zni:BK (2.89) BS02 rna N/A GO:0002181 ... Q8TS82 N/A
    1072275 9zni:BL (2.89) BS01 rna N/A GO:0000049 ... P61929 N/A
    1072276 9zni:BM (2.89) BS01 rna N/A GO:0003735 ... Q8TRR0 N/A
    1072277 9zni:BN (2.89) BS01 rna N/A GO:0003735 ... Q8TRC1 N/A
    1072278 9zni:BO (2.89) BS01 rna N/A GO:0003735 ... Q8TRR2 N/A
    1072279 9zni:BP (2.89) BS01 rna N/A GO:0002181 ... Q8TRT3 N/A
    1072280 9zni:BP (2.89) BS02 ZN N/A GO:0002181 ... Q8TRT3 N/A
    1072281 9zni:BQ (2.89) BS01 rna N/A GO:0000462 ... Q8TS56 N/A
    1072282 9zni:BR (2.89) BS01 rna N/A GO:0003735 ... Q8TRT8 N/A
    1072283 9zni:BR (2.89) BS02 ZN N/A GO:0003735 ... Q8TRT8 N/A
    1072284 9zni:BS (2.89) BS01 rna N/A GO:0003735 ... Q8THP2 N/A
    1072285 9zni:BT (2.89) BS01 rna N/A GO:0003735 ... Q8TRU3 N/A
    1072286 9zni:BU (2.89) BS01 rna N/A GO:0000028 ... A0A832W9Q0 N/A
    1072287 9zni:BV (2.89) BS01 ZN N/A N/A A0A832S8D7 N/A
    1072288 9zni:BV (2.89) BS02 ZN N/A N/A A0A832S8D7 N/A
    1072289 9zni:BW (2.89) BS01 rna N/A GO:0002181 ... Q8TJT2 N/A
    1072290 9zni:BX (2.89) BS01 rna N/A GO:0003735 ... P61931 N/A
    1072291 9zni:BX (2.89) BS02 ZN N/A GO:0003735 ... P61931 N/A
    1072292 9zni:BY (2.89) BS01 rna N/A GO:0000028 ... Q8TQL8 N/A
    1072293 9zni:BZ (2.89) BS01 rna N/A N/A A0A832SMB7 N/A
    1072294 9znj:A (2.15) BS01 DLZ N/A GO:0000906 ... Q7VTN4 N/A
    1072295 9znj:B (2.15) BS01 DLZ N/A GO:0000906 ... Q7VTN4 N/A
    1072296 9znj:B (2.15) BS02 DLZ N/A GO:0000906 ... Q7VTN4 N/A
    1072297 9znj:C (2.15) BS01 DLZ N/A GO:0000906 ... Q7VTN4 N/A
    1072298 9znj:C (2.15) BS02 DLZ N/A GO:0000906 ... Q7VTN4 N/A
    1072299 9znj:D (2.15) BS01 DLZ N/A GO:0000906 ... Q7VTN4 N/A
    1072300 9znj:D (2.15) BS02 DLZ N/A GO:0000906 ... Q7VTN4 N/A
    1072301 9znj:E (2.15) BS01 DLZ N/A GO:0000906 ... Q7VTN4 N/A
    1072302 9znj:E (2.15) BS02 DLZ N/A GO:0000906 ... Q7VTN4 N/A
    1072303 9znl:A (1.16) BS01 A1C3L N/A N/A P0DTD1 N/A
    1072304 9znn:A (2.9) BS01 A1C3G N/A GO:0003975 ... Q9H3H5 41446129
    1072305 9znn:A (2.9) BS02 A1C3H N/A GO:0003975 ... Q9H3H5 41446129
    1072306 9znn:A (2.9) BS03 A1C3H N/A GO:0003975 ... Q9H3H5 41446129
    1072307 9znn:B (2.9) BS01 A1C3H N/A GO:0003975 ... Q9H3H5 41446129
    1072308 9znn:B (2.9) BS02 A1C3H N/A GO:0003975 ... Q9H3H5 41446129
    1072309 9znn:B (2.9) BS03 A1C3G N/A GO:0003975 ... Q9H3H5 41446129
    1072310 9zno:A (2.91) BS01 A1C3G N/A N/A N/A 41446129
    1072311 9zno:B (2.91) BS01 A1C3G N/A N/A N/A 41446129
    1072312 9zo3:A (1.65) BS01 A1C3M N/A N/A P0DTD1 N/A
    1072313 9zoi:A (1.93) BS01 ATP N/A GO:0000166 ... Q13UJ9 N/A
    1072314 9zoi:A (1.93) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072315 9zoi:A (1.93) BS03 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072316 9zoi:B (1.93) BS01 ADP N/A GO:0000166 ... Q13UJ9 N/A
    1072317 9zoi:B (1.93) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072318 9zoi:C (1.93) BS01 ATP N/A GO:0000166 ... Q13UJ9 N/A
    1072319 9zoi:C (1.93) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072320 9zoi:C (1.93) BS03 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072321 9zoi:D (1.93) BS01 ADP N/A GO:0000166 ... Q13UJ9 N/A
    1072322 9zoi:D (1.93) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072323 9zok:A (2.09) BS01 ADP N/A GO:0000166 ... Q13UJ9 N/A
    1072324 9zok:A (2.09) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072325 9zok:A (2.09) BS03 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072326 9zok:B (2.09) BS01 ADP N/A GO:0000166 ... Q13UJ9 N/A
    1072327 9zok:B (2.09) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072328 9zok:C (2.09) BS01 ADP N/A GO:0000166 ... Q13UJ9 N/A
    1072329 9zok:C (2.09) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072330 9zok:C (2.09) BS03 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072331 9zok:D (2.09) BS01 ADP N/A GO:0000166 ... Q13UJ9 N/A
    1072332 9zok:D (2.09) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072333 9zor:A (1.65) BS01 A1C3I N/A N/A Q9L4P2 N/A
    1072334 9zos:A (1.6) BS01 A1C3I N/A N/A Q9L4P2 N/A
    1072335 9zot:A (1.75) BS01 A1C3I N/A N/A Q9L4P2 N/A
    1072336 9zou:A (1.5) BS01 A1C3I N/A N/A Q9L4P2 N/A
    1072337 9zov:A (1.5) BS01 A1C3I N/A N/A Q9L4P2 N/A
    1072338 9zow:A (1.7) BS01 A1C3I N/A N/A Q9L4P2 N/A
    1072339 9zpb:A (2.19) BS01 AMP N/A GO:0000166 ... Q13UJ9 N/A
    1072340 9zpb:A (2.19) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072341 9zpb:B (2.19) BS01 AMP N/A GO:0000166 ... Q13UJ9 N/A
    1072342 9zpb:B (2.19) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072343 9zpb:C (2.19) BS01 AMP N/A GO:0000166 ... Q13UJ9 N/A
    1072344 9zpb:C (2.19) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072345 9zpb:D (2.19) BS01 AMP N/A GO:0000166 ... Q13UJ9 N/A
    1072346 9zpb:D (2.19) BS02 MG N/A GO:0000166 ... Q13UJ9 N/A
    1072347 9zpc:A (3.83) BS01 GDP N/A GO:0004674 ... A0JP11 N/A
    1072348 9zpc:D (3.83) BS01 ZN N/A GO:0000045 ... Q14457 N/A
    1072349 9zpd:A (3.38) BS01 GTP N/A GO:0004674 ... A0JP11 N/A
    1072350 9zpd:D (3.38) BS01 peptide N/A GO:0000045 ... Q14457
    Q92622    		 N/A
    1072351 9zpd:D (3.38) BS02 ZN N/A GO:0000045 ... Q14457
    Q92622    		 N/A
    1072352 9zpo:A (3.67) BS01 A1C3Q N/A N/A O15554 N/A
    1072353 9zpo:B (3.67) BS01 A1C3Q N/A N/A O15554 N/A
    1072354 9zpo:C (3.67) BS01 A1C3Q N/A N/A O15554 N/A
    1072355 9zpo:E (3.67) BS01 A1C3Q N/A GO:0000922 ... P0DP23 N/A
    1072356 9zpo:E (3.67) BS02 CA N/A GO:0000922 ... P0DP23 N/A
    1072357 9zpo:E (3.67) BS03 CA N/A GO:0000922 ... P0DP23 N/A
    1072358 9zpo:F (3.67) BS01 A1C3Q N/A GO:0000922 ... P0DP23 N/A
    1072359 9zpo:F (3.67) BS02 CA N/A GO:0000922 ... P0DP23 N/A
    1072360 9zpo:F (3.67) BS03 CA N/A GO:0000922 ... P0DP23 N/A
    1072361 9zpo:G (3.67) BS01 A1C3Q N/A GO:0000922 ... P0DP23 N/A
    1072362 9zpo:G (3.67) BS02 CA N/A GO:0000922 ... P0DP23 N/A
    1072363 9zpo:G (3.67) BS03 CA N/A GO:0000922 ... P0DP23 N/A
    1072364 9zpo:H (3.67) BS01 CA N/A GO:0000922 ... P0DP23 N/A
    1072365 9zpo:H (3.67) BS02 CA N/A GO:0000922 ... P0DP23 N/A
    1072366 9zpu:A (2.85) BS01 ADP N/A GO:0004747 ... A0A0H3GDY9 N/A
    1072367 9zpu:B (2.85) BS01 ADP N/A GO:0004747 ... A0A0H3GDY9 N/A
    1072368 9zpu:C (2.85) BS01 ADP N/A GO:0004747 ... A0A0H3GDY9 N/A
    1072369 9zpu:D (2.85) BS01 ADP N/A GO:0004747 ... A0A0H3GDY9 N/A
    1072370 9zpu:E (2.85) BS01 ADP N/A GO:0004747 ... A0A0H3GDY9 N/A
    1072371 9zpu:F (2.85) BS01 ADP N/A GO:0004747 ... A0A0H3GDY9 N/A
    1072372 9zpv:A (2.07) BS01 CLR N/A N/A P29973 41473327
    1072373 9zpv:B (2.07) BS01 CLR N/A N/A P29973 41473327
    1072374 9zpv:C (2.07) BS01 CLR N/A N/A P29973 41473327
    1072375 9zpv:D (2.07) BS01 CLR N/A N/A P29973 41473327
    1072376 9zpw:A (2.47) BS01 PCG N/A N/A P29973 41473327
    1072377 9zpw:A (2.47) BS02 CLR N/A N/A P29973 41473327
    1072378 9zpw:B (2.47) BS01 PCG N/A N/A P29973 41473327
    1072379 9zpw:B (2.47) BS02 CLR N/A N/A P29973 41473327
    1072380 9zpw:C (2.47) BS01 PCG N/A N/A P29973 41473327
    1072381 9zpw:C (2.47) BS02 CLR N/A N/A P29973 41473327
    1072382 9zpw:D (2.47) BS01 PCG N/A N/A P29973 41473327
    1072383 9zpw:D (2.47) BS02 CLR N/A N/A P29973 41473327
    1072384 9zpx:A (2.64) BS01 PCG N/A N/A P29973 41473327
    1072385 9zpx:A (2.64) BS02 CLR N/A N/A P29973 41473327
    1072386 9zpx:B (2.64) BS01 PCG N/A N/A P29973 41473327
    1072387 9zpx:B (2.64) BS02 CLR N/A N/A P29973 41473327
    1072388 9zpx:C (2.64) BS01 PCG N/A N/A P29973 41473327
    1072389 9zpx:C (2.64) BS02 CLR N/A N/A P29973 41473327
    1072390 9zpx:D (2.64) BS01 PCG N/A N/A P29973 41473327
    1072391 9zpx:D (2.64) BS02 CLR N/A N/A P29973 41473327
    1072392 9zpy:A (2.48) BS01 CLR N/A N/A P29973 41473327
    1072393 9zpy:B (2.48) BS01 CLR N/A N/A P29973 41473327
    1072394 9zpy:B (2.48) BS02 PT5 N/A N/A P29973 41473327
    1072395 9zpy:C (2.48) BS01 CLR N/A N/A P29973 41473327
    1072396 9zpy:C (2.48) BS02 PT5 N/A N/A P29973 41473327
    1072397 9zpy:D (2.48) BS01 CLR N/A N/A P29973 41473327
    1072398 9zpz:A (2.64) BS01 PCG N/A N/A P29973 41473327
    1072399 9zpz:A (2.64) BS02 CLR N/A N/A P29973 41473327
    1072400 9zpz:A (2.64) BS03 PT5 N/A N/A P29973 41473327
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).