SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    110401 2vuo:B (1.95) BS01 BMA ? N/A P01870 18764781
    110402 2vuo:B (1.95) BS02 GAL ? N/A P01870 18764781
    110403 2vuo:B (1.95) BS03 AZI ? N/A P01870 18764781
    110404 2vur:A (2.2) BS01 YX1 3.2.1.169 N/A Q0TR53 18721751 MOAD: ic50=30uM
    110405 2vur:B (2.2) BS01 YX1 3.2.1.169 N/A Q0TR53 18721751 MOAD: ic50=30uM
    110406 2vus:I (2.6) BS01 ZN ? GO:0003700 ... P17429 18602114
    110407 2vus:J (2.6) BS01 ZN ? GO:0003700 ... P17429 18602114
    110408 2vus:K (2.6) BS01 ZN ? GO:0003700 ... P17429 18602114
    110409 2vus:L (2.6) BS01 ZN ? GO:0003700 ... P17429 18602114
    110410 2vus:M (2.6) BS01 ZN ? GO:0003700 ... P17429 18602114
    110411 2vus:N (2.6) BS01 ZN ? GO:0003700 ... P17429 18602114
    110412 2vus:O (2.6) BS01 ZN ? GO:0003700 ... P17429 18602114
    110413 2vus:P (2.6) BS01 ZN ? GO:0003700 ... P17429 18602114
    110414 2vut:A (2.3) BS01 NAD ? GO:0001081 ... Q5AU62 18602114
    110415 2vut:B (2.3) BS01 NAD ? GO:0001081 ... Q5AU62 18602114
    110416 2vut:C (2.3) BS01 NAD ? GO:0001081 ... Q5AU62 18602114
    110417 2vut:D (2.3) BS01 NAD ? GO:0001081 ... Q5AU62 18602114
    110418 2vut:E (2.3) BS01 NAD ? GO:0001081 ... Q5AU62 18602114
    110419 2vut:F (2.3) BS01 NAD ? GO:0001081 ... Q5AU62 18602114
    110420 2vut:G (2.3) BS01 NAD ? GO:0001081 ... Q5AU62 18602114
    110421 2vut:H (2.3) BS01 NAD ? GO:0001081 ... Q5AU62 18602114
    110422 2vut:I (2.3) BS01 ZN ? GO:0003700 ... P17429 18602114
    110423 2vut:J (2.3) BS01 ZN ? GO:0003700 ... P17429 18602114
    110424 2vut:K (2.3) BS01 ZN ? GO:0003700 ... P17429 18602114
    110425 2vut:L (2.3) BS01 ZN ? GO:0003700 ... P17429 18602114
    110426 2vut:M (2.3) BS01 ZN ? GO:0003700 ... P17429 18602114
    110427 2vut:N (2.3) BS01 ZN ? GO:0003700 ... P17429 18602114
    110428 2vut:O (2.3) BS01 ZN ? GO:0003700 ... P17429 18602114
    110429 2vut:P (2.3) BS01 ZN ? GO:0003700 ... P17429 18602114
    110430 2vuu:A (2.8) BS01 NAP ? GO:0001081 ... Q5AU62 18602114
    110431 2vuu:B (2.8) BS01 NAP ? GO:0001081 ... Q5AU62 18602114
    110432 2vuu:C (2.8) BS01 NAP ? GO:0001081 ... Q5AU62 18602114
    110433 2vuu:D (2.8) BS01 NAP ? GO:0001081 ... Q5AU62 18602114
    110434 2vuu:E (2.8) BS01 NAP ? GO:0001081 ... Q5AU62 18602114
    110435 2vuu:F (2.8) BS01 NAP ? GO:0001081 ... Q5AU62 18602114
    110436 2vuu:G (2.8) BS01 NAP ? GO:0001081 ... Q5AU62 18602114
    110437 2vuu:H (2.8) BS01 NAP ? GO:0001081 ... Q5AU62 18602114
    110438 2vuu:I (2.8) BS01 ZN ? GO:0003700 ... P17429 18602114
    110439 2vuu:J (2.8) BS01 ZN ? GO:0003700 ... P17429 18602114
    110440 2vuu:K (2.8) BS01 ZN ? GO:0003700 ... P17429 18602114
    110441 2vuu:L (2.8) BS01 ZN ? GO:0003700 ... P17429 18602114
    110442 2vuu:M (2.8) BS01 ZN ? GO:0003700 ... P17429 18602114
    110443 2vuu:N (2.8) BS01 ZN ? GO:0003700 ... P17429 18602114
    110444 2vuu:O (2.8) BS01 ZN ? GO:0003700 ... P17429 18602114
    110445 2vuu:P (2.8) BS01 ZN ? GO:0003700 ... P17429 18602114
    110446 2vuv:A (1.3) BS01 CA ? N/A Q3KVL7 18687680
    110447 2vuv:A (1.3) BS02 GOL ? N/A Q3KVL7 18687680
    110448 2vuv:A (1.3) BS03 GOL ? N/A Q3KVL7 18687680
    110449 2vuw:A (1.8) BS01 5ID 2.7.11.1 GO:0004672 ... Q8TF76 19918057
    110450 2vux:A (2.8) BS01 FE 1.17.4.1 GO:0009263 ... Q7LG56 N/A
    110451 2vux:B (2.8) BS01 FE 1.17.4.1 GO:0009263 ... Q7LG56 N/A
    110452 2vuz:A (1.7) BS01 BMA ? N/A Q3KVL7 18687680
    110453 2vuz:A (1.7) BS02 MAN ? N/A Q3KVL7 18687680
    110454 2vuz:A (1.7) BS03 CA ? N/A Q3KVL7 18687680
    110455 2vuz:A (1.7) BS04 GOL ? N/A Q3KVL7 18687680
    110456 2vuz:A (1.7) BS05 GOL ? N/A Q3KVL7 18687680
    110457 2vuz:A (1.7) BS06 GOL ? N/A Q3KVL7 18687680
    110458 2vv0:A (2.55) BS01 HXA ? GO:0003677 ... P37231 19172745
    110459 2vv0:B (2.55) BS01 HXA ? GO:0003677 ... P37231 19172745
    110460 2vv1:A (2.2) BS01 4HD ? GO:0003677 ... P37231 19172745
    110461 2vv1:B (2.2) BS01 4HD ? GO:0003677 ... P37231 19172745
    110462 2vv2:A (2.75) BS01 5HE ? GO:0003677 ... P37231 19172745
    110463 2vv2:B (2.75) BS01 5HE ? GO:0003677 ... P37231 19172745
    110464 2vv2:B (2.75) BS02 5HE ? GO:0003677 ... P37231 19172745
    110465 2vv3:A (2.85) BS01 4R8 ? GO:0003677 ... P37231 19172745
    110466 2vv4:A (2.35) BS01 6OC ? GO:0003677 ... P37231 19172745
    110467 2vv4:B (2.35) BS01 6OB ? GO:0003677 ... P37231 19172745
    110468 2vv6:A (1.5) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110469 2vv6:B (1.5) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110470 2vv6:C (1.5) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110471 2vv6:D (1.5) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110472 2vv6:D (1.5) BS02 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110473 2vv7:A (1.81) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110474 2vv7:B (1.81) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110475 2vv7:C (1.81) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110476 2vv7:D (1.81) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110477 2vv8:A (1.61) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110478 2vv8:A (1.61) BS02 CMO 2.7.13.3 GO:0006355 ... P23222 18942854
    110479 2vv8:B (1.61) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110480 2vv8:B (1.61) BS02 CMO 2.7.13.3 GO:0006355 ... P23222 18942854
    110481 2vv8:C (1.61) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110482 2vv8:C (1.61) BS02 CMO 2.7.13.3 GO:0006355 ... P23222 18942854
    110483 2vv8:D (1.61) BS01 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110484 2vv8:D (1.61) BS02 HEM 2.7.13.3 GO:0006355 ... P23222 18942854
    110485 2vv8:D (1.61) BS03 CMO 2.7.13.3 GO:0006355 ... P23222 18942854
    110486 2vv9:A (1.9) BS01 IM9 2.7.11.22 GO:0000082 ... P24941 18617397 MOAD: ic50=0.017uM
    BindingDB: IC50=17nM
    110487 2vva:X (1.56) BS01 CO2 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 19520834
    110488 2vva:X (1.56) BS02 CO2 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 19520834
    110489 2vva:X (1.56) BS03 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 19520834
    110490 2vvb:X (1.66) BS01 BCT 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 19520834 BindingDB: Ki=85000000nM
    110491 2vvb:X (1.66) BS02 CO2 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 19520834
    110492 2vvb:X (1.66) BS03 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 19520834
    110493 2vvc:A (1.95) BS01 LZF 3.4.21.6 GO:0004252 ... P00742 19200624 BindingDB: Ki=3nM
    110494 2vvc:A (1.95) BS02 CA 3.4.21.6 GO:0004252 ... P00742 19200624
    110495 2vvc:B (1.95) BS01 LZF 3.4.21.6 GO:0004252 ... P00742 19200624 BindingDB: Ki=3nM
    110496 2vvd:A (2.26) BS01 CA ? N/A Q9XJR3 18775333
    110497 2vvd:A (2.26) BS02 CA ? N/A Q9XJR3 18775333
    110498 2vve:A (1.77) BS01 CA ? N/A Q9XJR3 18775333
    110499 2vve:B (1.77) BS01 CA ? N/A Q9XJR3 18775333
    110500 2vve:B (1.77) BS02 CA ? N/A Q9XJR3 18775333
    110501 2vve:B (1.77) BS03 CA ? N/A Q9XJR3 18775333
    110502 2vvf:A (2.5) BS01 CA ? GO:0019028 ... P15794 18775333
    110503 2vvf:B (2.5) BS01 CA ? GO:0019028 ... P15794 18775333
    110504 2vvf:C (2.5) BS01 CA ? GO:0019028 ... P15794 18775333
    110505 2vvf:D (2.5) BS01 CA ? GO:0019028 ... P15794 18775333
    110506 2vvf:E (2.5) BS01 CA ? GO:0019028 ... P15794 18775333
    110507 2vvf:F (2.5) BS01 CA ? GO:0019028 ... P15794 18775333
    110508 2vvg:A (1.6) BS01 ADP ? GO:0003777 ... A8BKD1 18463165
    110509 2vvg:B (1.6) BS01 ADP ? GO:0003777 ... A8BKD1 18463165
    110510 2vvh:A (1.8) BS01 SO3 ? GO:0006091 ... Q5S6Z9 19017808
    110511 2vvh:B (1.8) BS01 SO3 ? GO:0006091 ... Q5S6Z9 19017808
    110512 2vvh:C (1.8) BS01 SO3 ? GO:0006091 ... Q5S6Z9 19017808
    110513 2vvh:D (1.8) BS01 SO3 ? GO:0006091 ... Q5S6Z9 19017808
    110514 2vvi:A (2.0) BS01 SO3 ? GO:0006091 ... Q5S6Z9 19017808
    110515 2vvi:B (2.0) BS01 SO3 ? GO:0006091 ... Q5S6Z9 19017808
    110516 2vvi:C (2.0) BS01 SO3 ? GO:0006091 ... Q5S6Z9 19017808
    110517 2vvi:D (2.0) BS01 SO3 ? GO:0006091 ... Q5S6Z9 19017808
    110518 2vvj:A (2.0) BS01 SO3 ? GO:0008218 ... Q5S6Z9 19017808
    110519 2vvj:B (2.0) BS01 SO3 ? GO:0008218 ... Q5S6Z9 19017808
    110520 2vvj:C (2.0) BS01 SO3 ? GO:0008218 ... Q5S6Z9 19017808
    110521 2vvj:D (2.0) BS01 SO3 ? GO:0008218 ... Q5S6Z9 19017808
    110522 2vvl:A (2.45) BS01 FAD 1.4.3.4 GO:0005777 ... P46882 18951902
    110523 2vvl:B (2.45) BS01 FAD 1.4.3.4 GO:0005777 ... P46882 18951902
    110524 2vvl:C (2.45) BS01 FAD 1.4.3.4 GO:0005777 ... P46882 18951902
    110525 2vvl:D (2.45) BS01 FAD 1.4.3.4 GO:0005777 ... P46882 18951902
    110526 2vvl:E (2.45) BS01 FAD 1.4.3.4 GO:0005777 ... P46882 18951902
    110527 2vvl:F (2.45) BS01 FAD 1.4.3.4 GO:0005777 ... P46882 18951902
    110528 2vvl:G (2.45) BS01 FAD 1.4.3.4 GO:0005777 ... P46882 18951902
    110529 2vvl:H (2.45) BS01 FAD 1.4.3.4 GO:0005777 ... P46882 18951902
    110530 2vvm:A (1.85) BS01 FAD 1.4.3.4 GO:0005777 ... P46882 18951902
    110531 2vvm:A (1.85) BS02 PRO 1.4.3.4 GO:0005777 ... P46882 18951902
    110532 2vvm:B (1.85) BS01 FAD 1.4.3.4 GO:0005777 ... P46882 18951902
    110533 2vvm:B (1.85) BS02 PRO 1.4.3.4 GO:0005777 ... P46882 18951902
    110534 2vvn:A (1.85) BS01 NHT 3.2.1.169 N/A Q89ZI2 18587388
    110535 2vvn:B (1.85) BS01 NHT 3.2.1.169 N/A Q89ZI2 18587388
    110536 2vvo:A (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    110537 2vvo:A (1.85) BS02 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    110538 2vvo:B (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    110539 2vvo:B (1.85) BS02 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    110540 2vvo:C (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    110541 2vvo:C (1.85) BS02 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    110542 2vvo:D (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    110543 2vvo:D (1.85) BS02 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    110544 2vvo:E (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    110545 2vvp:A (1.65) BS01 R52 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110546 2vvp:A (1.65) BS02 5RP 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110547 2vvp:A (1.65) BS03 R52 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110548 2vvp:A (1.65) BS04 5RP 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110549 2vvp:B (1.65) BS01 R52 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110550 2vvp:B (1.65) BS02 5RP 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110551 2vvp:B (1.65) BS03 R52 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110552 2vvp:B (1.65) BS04 5RP 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110553 2vvp:C (1.65) BS01 R52 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110554 2vvp:C (1.65) BS02 5RP 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110555 2vvp:C (1.65) BS03 R52 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110556 2vvp:C (1.65) BS04 5RP 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110557 2vvp:D (1.65) BS01 R52 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110558 2vvp:D (1.65) BS02 5RP 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110559 2vvp:D (1.65) BS03 R52 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110560 2vvp:D (1.65) BS04 5RP 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110561 2vvp:E (1.65) BS01 R52 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110562 2vvp:E (1.65) BS02 5RP 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110563 2vvq:A (2.0) BS01 R10 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110564 2vvq:A (2.0) BS02 R10 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110565 2vvq:B (2.0) BS01 R10 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110566 2vvq:B (2.0) BS02 R10 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110567 2vvq:C (2.0) BS01 R10 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110568 2vvq:C (2.0) BS02 R10 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110569 2vvq:D (2.0) BS01 R10 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110570 2vvq:D (2.0) BS02 R10 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110571 2vvq:E (2.0) BS01 R10 5.3.1.6 GO:0004751 ... P9WKD7 18640127
    110572 2vvs:A (2.24) BS01 OAN 3.2.1.169 N/A Q89ZI2 18842583 MOAD: Ki=46nM
    110573 2vvt:A (1.65) BS01 I24 5.1.1.3 GO:0008881 ... Q836J0 18614367 MOAD: ic50=5.8uM
    BindingDB: IC50=5800nM
    110574 2vvt:A (1.65) BS02 DGL 5.1.1.3 GO:0008881 ... Q836J0 18614367
    110575 2vvt:B (1.65) BS01 I24 5.1.1.3 GO:0008881 ... Q836J0 18614367 MOAD: ic50=5.8uM
    BindingDB: IC50=5800nM
    110576 2vvt:B (1.65) BS02 DGL 5.1.1.3 GO:0008881 ... Q836J0 18614367
    110577 2vvu:A (2.3) BS01 H22 3.4.21.6 GO:0004252 ... P00742 19200624 BindingDB: Ki=8nM
    110578 2vvu:A (2.3) BS02 CA 3.4.21.6 GO:0004252 ... P00742 19200624
    110579 2vvv:A (1.73) BS01 H21 3.4.21.6 GO:0004252 ... P00742 19200624 BindingDB: Ki=6nM
    110580 2vvv:A (1.73) BS02 CA 3.4.21.6 GO:0004252 ... P00742 19200624
    110581 2vvz:A (2.5) BS01 DAN 3.2.1.18 GO:0004308 ... P62575 18765901 BindingDB: IC50=4800nM, Ki=1.6e+3nM
    110582 2vvz:B (2.5) BS01 DAN 3.2.1.18 GO:0004308 ... P62575 18765901 BindingDB: IC50=4800nM, Ki=1.6e+3nM
    110583 2vw1:A (2.39) BS01 DAN 3.2.1.18 GO:0004308 ... Q54727 18835278 MOAD: Ki=0.3mM
    110584 2vw2:A (1.7) BS01 NHE 3.2.1.18 GO:0004308 ... Q54727 18835278
    110585 2vw2:A (1.7) BS02 NHE 3.2.1.18 GO:0004308 ... Q54727 18835278
    110586 2vw4:A (1.9) BS01 CU 1.7.2.1 GO:0005507 ... O68601 18728313
    110587 2vw4:A (1.9) BS02 CU 1.7.2.1 GO:0005507 ... O68601 18728313
    110588 2vw4:A (1.9) BS03 ZN 1.7.2.1 GO:0005507 ... O68601 18728313
    110589 2vw4:B (1.9) BS01 ZN 1.7.2.1 GO:0005507 ... O68601 18728313
    110590 2vw4:B (1.9) BS02 CU 1.7.2.1 GO:0005507 ... O68601 18728313
    110591 2vw4:B (1.9) BS03 CU 1.7.2.1 GO:0005507 ... O68601 18728313
    110592 2vw5:A (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    110593 2vw5:B (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    110594 2vw5:C (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    110595 2vw5:D (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    110596 2vw6:A (1.9) BS01 CU 1.7.2.1 GO:0005507 ... O68601 18728313
    110597 2vw6:A (1.9) BS02 CU 1.7.2.1 GO:0005507 ... O68601 18728313
    110598 2vw6:A (1.9) BS03 ZN 1.7.2.1 GO:0005507 ... O68601 18728313
    110599 2vw6:B (1.9) BS01 CU 1.7.2.1 GO:0005507 ... O68601 18728313
    110600 2vw6:B (1.9) BS02 CU 1.7.2.1 GO:0005507 ... O68601 18728313

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).